Simmune Analyzer User Manual
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Simmune Analyzer User Manual
Table of Contents
1. Introduction
2.
Model
Panel
3.
Initial States
Panel
3.1. "
List of Initial States
" section
3.2. "
Initial State
" section
4. Protocol
5. Rate Parameter
6. Simulation Setup
6.1. Defining & running Simulations
7. Status
8. Global Sensitivity
9. Plot
10. Simulation Groups
11. Data Export
12. Support and Contact
13. Administration of user accounts.
14. Running Simmune on a cluster
14.1. Running MongoDB on Ubuntu 14.04
14.2. Using Vagrant to run MongoDB
14.3. Running the compute processes.