16S Metagenomics Aggregate Report
16S Metagenomics, Version: 1.1.0
Report Date: 02/14/2022 12:17:59
Sample Information
| Sample Number | Sample ID | Number Reads PF | % Reads Classified to Genus |
| 1 | 20042XD-03-04 | 112514 | 90.22 % |
| 2 | 20042XD-03-03 | 95854 | 86.04 % |
| 3 | 20042XD-03-08 | 109258 | 88.87 % |
| 4 | 20042XD-03-05 | 113271 | 89.49 % |
| 5 | 20042XD-03-07 | 98331 | 92.36 % |
| 6 | 20042XD-03-06 | 99744 | 88.64 % |
| 7 | 20042XD-03-02 | 104784 | 85.45 % |
| 8 | 20042XD-03-01 | 96700 | 83.38 % |
Principal Coordinate Analysis (PCoA)
This scatterplot shows a Principal Coordinate Analysis (PCoA) of the normalized relative abundance of all samples.
The PCoA measures differences in the distribution of taxonomic classifications between samples, up to a fixed tanonomic level.
Select the maximum taxonomic level to compare sample classification results:
Hierarchical Clustering Dendrogram
This dendrogram shows a hierarchical clustering of samples based on genus-level classifications.
The barchart beneath each sample show the relative abundence of its genus-level classifications.
Mouseover the barcharts for taxonomic labels.
Species Diversity Results
Shannon Species Diversity measures the entropy of Species-level classifications in the sample.
See http://en.wikipedia.org/wiki/Species_diversity for more information.
| Sample Number | Sample ID | Shannon Species Diversity | Number of Species Identified |
| 1 | 20042XD-03-04 | 3.339 | 915 |
| 2 | 20042XD-03-03 | 3.252 | 788 |
| 3 | 20042XD-03-08 | 3.180 | 896 |
| 4 | 20042XD-03-05 | 3.188 | 778 |
| 5 | 20042XD-03-07 | 3.166 | 807 |
| 6 | 20042XD-03-06 | 3.186 | 748 |
| 7 | 20042XD-03-02 | 3.199 | 852 |
| 8 | 20042XD-03-01 | 2.974 | 783 |
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