Package evaluation to test NautyGraphs on Julia 1.12.7-DEV.43 (fe4faaea78*) started at 2026-06-22T01:48:37.175 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 9.98s ################################################################################ # Installation # Installing NautyGraphs... Resolving package versions... Installed OrderedCollections ─ v1.8.2 Installed Inflate ──────────── v0.1.5 Installed ArnoldiMethod ────── v0.4.0 Installed JLLWrappers ──────── v1.8.0 Installed MacroTools ───────── v0.5.16 Installed SimpleTraits ─────── v0.9.6 Installed NautyGraphs ──────── v0.7.2 Installed Preferences ──────── v1.5.2 Installed StaticArrays ─────── v1.9.18 Installed Graphs ───────────── v1.14.0 Installed Statistics ───────── v1.11.1 Installed DataStructures ───── v0.19.5 Installed StaticArraysCore ─── v1.4.4 Installed PrecompileTools ──── v1.3.4 Installed nauty_jll ────────── v2.8.10+1 Installing 1 artifacts Installed artifact nauty 17.2 MiB Updating `~/.julia/environments/v1.12/Project.toml` [7509a0a4] + NautyGraphs v0.7.2 Updating `~/.julia/environments/v1.12/Manifest.toml` [ec485272] + ArnoldiMethod v0.4.0 [864edb3b] + DataStructures v0.19.5 [86223c79] + Graphs v1.14.0 [d25df0c9] + Inflate v0.1.5 [692b3bcd] + JLLWrappers v1.8.0 [1914dd2f] + MacroTools v0.5.16 [7509a0a4] + NautyGraphs v0.7.2 ⌅ [bac558e1] + OrderedCollections v1.8.2 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [699a6c99] + SimpleTraits v0.9.6 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [55c6dc9b] + nauty_jll v2.8.10+1 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [781609d7] + GMP_jll v6.3.0+2 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 5.72s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4698.5 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 26 already precompiled. 24 dependencies precompiled but different versions are currently loaded (ArgTools, Base64, Dates, Downloads, JuliaSyntaxHighlighting, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, Logging, Markdown, MozillaCACerts_jll, NetworkOptions, OpenSSL_jll, Pkg, Printf, StyledStrings, TOML, Tar, UUIDs, Zlib_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 1 dependent of these packages may trigger further precompilation to work with the unexpected versions. Precompiling package dependencies... Precompiling packages... 1334.2 ms ✓ Compiler 4708.4 ms ✓ OrderedCollections 1063.9 ms ✓ Inflate 1114.6 ms ✓ Statistics 40552.9 ms ✓ JuliaSyntax 8182.7 ms ✓ MacroTools 1106.2 ms ✓ Interfaces 1169.5 ms ✓ StaticArraysCore 3925.5 ms ✓ Compat 1182.5 ms ✓ Preferences 2684.8 ms ✓ CodeTracking 3781.4 ms ✓ DataStructures 1520.0 ms ✓ Statistics → SparseArraysExt 3223.9 ms ✓ SimpleTraits 893.5 ms ✓ Compat → CompatLinearAlgebraExt 1175.2 ms ✓ PrecompileTools 1506.7 ms ✓ JLLWrappers 13272.2 ms ✓ JuliaInterpreter 6592.4 ms ✓ Aqua 18532.6 ms ✓ StaticArrays 2130.2 ms ✓ nauty_jll 22959.6 ms ✓ LoweredCodeUtils 1362.8 ms ✓ StaticArrays → StaticArraysStatisticsExt 6793.2 ms ✓ ArnoldiMethod 14951.9 ms ✓ Revise 14153.1 ms ✓ Graphs 126198.8 ms ✓ JET 3801.4 ms ✓ NautyGraphs 28 dependencies successfully precompiled in 310 seconds. 35 already precompiled. 24 dependencies precompiled but different versions are currently loaded (ArgTools, Base64, Dates, Downloads, JuliaSyntaxHighlighting, LibCURL, LibCURL_jll, LibGit2, LibGit2_jll, LibSSH2_jll, Logging, Markdown, MozillaCACerts_jll, NetworkOptions, OpenSSL_jll, Pkg, Printf, StyledStrings, TOML, Tar, UUIDs, Zlib_jll, nghttp2_jll and p7zip_jll). Restart julia to access the new versions. Otherwise, 22 dependents of these packages may trigger further precompilation to work with the unexpected versions. Precompilation completed after 336.38s ################################################################################ # Testing # Testing NautyGraphs Status `/tmp/jl_FpEZyI/Project.toml` [4c88cf16] Aqua v0.8.16 [86223c79] Graphs v1.14.0 [85a1e053] Interfaces v0.3.2 [c3a54625] JET v0.11.4 [7509a0a4] NautyGraphs v0.7.2 [55c6dc9b] nauty_jll v2.8.10+1 [37e2e46d] LinearAlgebra v1.12.0 [44cfe95a] Pkg v1.12.1 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_FpEZyI/Manifest.toml` [4c88cf16] Aqua v0.8.16 [ec485272] ArnoldiMethod v0.4.0 [da1fd8a2] CodeTracking v3.0.2 [34da2185] Compat v4.18.1 [807dbc54] Compiler v0.1.1 [864edb3b] DataStructures v0.19.5 [86223c79] Graphs v1.14.0 [d25df0c9] Inflate v0.1.5 [85a1e053] Interfaces v0.3.2 [c3a54625] JET v0.11.4 [692b3bcd] JLLWrappers v1.8.0 ⌅ [aa1ae85d] JuliaInterpreter v0.10.12 [70703baa] JuliaSyntax v1.0.2 ⌅ [6f1432cf] LoweredCodeUtils v3.5.3 [1914dd2f] MacroTools v0.5.16 [7509a0a4] NautyGraphs v0.7.2 ⌅ [bac558e1] OrderedCollections v1.8.2 [aea7be01] PrecompileTools v1.3.4 [21216c6a] Preferences v1.5.2 [295af30f] Revise v3.15.1 [699a6c99] SimpleTraits v0.9.6 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [55c6dc9b] nauty_jll v2.8.10+1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [8bf52ea8] CRC32c v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [781609d7] GMP_jll v6.3.0+2 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.6+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Cloning git-repo `https://github.com/JuliaGraphs/GraphsInterfaceChecker.jl` Updating git-repo `https://github.com/JuliaGraphs/GraphsInterfaceChecker.jl` Resolving package versions... Updating `/tmp/jl_FpEZyI/Project.toml` [3bef136c] + GraphsInterfaceChecker v0.1.0 `https://github.com/JuliaGraphs/GraphsInterfaceChecker.jl#main` Updating `/tmp/jl_FpEZyI/Manifest.toml` [3bef136c] + GraphsInterfaceChecker v0.1.0 `https://github.com/JuliaGraphs/GraphsInterfaceChecker.jl#main` Precompiling packages... 4409.9 ms ✓ GraphsInterfaceChecker 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. 25 dependencies precompiled but different versions are currently loaded (ArnoldiMethod, Base64, DataStructures, Dates, Graphs, Inflate, InteractiveUtils, JuliaSyntaxHighlighting, MacroTools, Markdown, OrderedCollections, PrecompileTools, Preferences, Printf, Serialization, SimpleTraits, SparseArrays, StaticArrays, StaticArrays → StaticArraysStatisticsExt, StaticArraysCore, Statistics, Statistics → SparseArraysExt, StyledStrings, SuiteSparse_jll and TOML). Restart julia to access the new versions. Otherwise, 1 dependent of these packages may trigger further precompilation to work with the unexpected versions. Testing AbstractGraphInterface is implemented for DenseNautyGraph Mandatory components is_directed: (`is_directed` outputs a boolean [true, true, true, true]) edgetype: (`edgetype` outputs a type [true, true, true, true]) vertices: (`vertices` is coherent with `eltype` [true, true, true, true], every vertex in `vertices(g)` exists [true, true, true, true], vertices beyond `vertices(g)` don't exist [true, true, true, true]) edges: (`edges` is coherent with `edgetype` [true, true, true, true], every edge in `edges` exists [true, true, true, true], `edges` are symmetric for undirected graphs [true, true, true, true]) nv: (`nv` outputs an integer` [true, true, true, true], `nv` is coherent with `vertices` [true, true, true, true]) ne: (`ne` outputs an integer` [true, true, true, true], `ne` is coherent with `edges` [true, true, true, true]) neighbors: (`inneighbors` is coherent with `has_edge` [true, true, true, true], `outneighbors` is coherent with `has_edge` [true, true, true, true], `inneighbors` and `outneighbors` coincide for undirected graphs [true, true, true, true]) weights: (`weights` outputs a matrix of real numbers [true, true, true, true], `weights` has the right size [true, true, true, true], `weights` are symmetric for undirected graphs [true, true, true, true]) Optional components mutation: (`add_vertex!` increases `nv` by one [true, true, true, true], `rem_vertex!` decreases `nv` by one [true, true, true, true]) Testing AbstractGraphInterface is implemented for SparseNautyGraph Mandatory components is_directed: (`is_directed` outputs a boolean [true, true, true, true]) edgetype: (`edgetype` outputs a type [true, true, true, true]) vertices: (`vertices` is coherent with `eltype` [true, true, true, true], every vertex in `vertices(g)` exists [true, true, true, true], vertices beyond `vertices(g)` don't exist [true, true, true, true]) edges: (`edges` is coherent with `edgetype` [true, true, true, true], every edge in `edges` exists [true, true, true, true], `edges` are symmetric for undirected graphs [true, true, true, true]) nv: (`nv` outputs an integer` [true, true, true, true], `nv` is coherent with `vertices` [true, true, true, true]) ne: (`ne` outputs an integer` [true, true, true, true], `ne` is coherent with `edges` [true, true, true, true]) neighbors: (`inneighbors` is coherent with `has_edge` [true, true, true, true], `outneighbors` is coherent with `has_edge` [true, true, true, true], `inneighbors` and `outneighbors` coincide for undirected graphs [true, true, true, true]) weights: (`weights` outputs a matrix of real numbers [true, true, true, true], `weights` has the right size [true, true, true, true], `weights` are symmetric for undirected graphs [true, true, true, true]) Optional components mutation: (`add_vertex!` increases `nv` by one [true, true, true, true], `rem_vertex!` decreases `nv` by one [true, true, true, true]) JET: JET-test failed at /home/pkgeval/.julia/packages/JET/Nf2tu/src/JETBase.jl:1400 Expression: (JET.report_package)(NautyGraphs; toplevel_logger = nothing, target_modules = (NautyGraphs,)) ═════ 5 possible errors found ═════ ┌ ==(g::DenseNautyGraph, h::DenseNautyGraph) @ NautyGraphs /home/pkgeval/.julia/packages/NautyGraphs/4mQ8n/src/densenautygraph.jl:149 │ non-boolean `Missing` found in boolean context (1/2 union split): goto %11 if not ((g::DenseNautyGraph).graphset::Graphset NautyGraphs.:(==) (h::DenseNautyGraph).graphset::Graphset)::Union{Missing, Bool} └──────────────────── ┌ ==(e1::Graphs.SimpleGraphs.SimpleEdgeIter{…}, e2::Graphs.SimpleGraphs.SimpleEdgeIter{…}) @ NautyGraphs /home/pkgeval/.julia/packages/NautyGraphs/4mQ8n/src/sparsenautygraph.jl:355 │ non-boolean `Missing` found in boolean context (1/2 union split): goto %84 if not NautyGraphs.all(#58, NautyGraphs.zip(neighs_g::SubArray{Int32, 1, Vector{Int32}, Tuple{UnitRange{UInt64}}, true}, neighs_h::Any)::Base.Iterators.Zip{Is} where Is<:Tuple{SubArray{Int32, 1, Vector{Int32}, Tuple{UnitRange{UInt64}}, true}, Any})::Union{Missing, Bool} └──────────────────── ┌ ==(e1::Graphs.SimpleGraphs.SimpleEdgeIter{…}, e2::Graphs.SimpleGraphs.SimpleEdgeIter{…}) @ NautyGraphs /home/pkgeval/.julia/packages/NautyGraphs/4mQ8n/src/sparsenautygraph.jl:383 │ non-boolean `Missing` found in boolean context (1/2 union split): goto %114 if not NautyGraphs.all(NautyGraphs.iszero, view(S#286, ((m::Int64 NautyGraphs.:+ 1)::Int64 NautyGraphs.:(:) lastindex(S#286, 1)::Int64)::UnitRange{Int64}, NautyGraphs.:(:))::SubArray{Bool, 2, P, Tuple{UnitRange{Int64}, Base.Slice{Base.OneTo{Int64}}}, false} where P<:Graphset)::Union{Missing, Bool} └──────────────────── ┌ ==(e1::Graphs.SimpleGraphs.SimpleEdgeIter{…}, e2::Graphs.SimpleGraphs.SimpleEdgeIter{…}) @ NautyGraphs /home/pkgeval/.julia/packages/NautyGraphs/4mQ8n/src/sparsenautygraph.jl:384 │ non-boolean `Missing` found in boolean context (1/2 union split): goto %140 if not NautyGraphs.all(NautyGraphs.iszero, view(S#287, (1 NautyGraphs.:(:) m::Int64)::UnitRange{Int64}, ((m::Int64 NautyGraphs.:+ 1)::Int64 NautyGraphs.:(:) lastindex(S#287, 2)::Int64)::UnitRange{Int64})::SubArray{Bool, 2, P, Tuple{UnitRange{Int64}, UnitRange{Int64}}, false} where P<:Graphset)::Union{Missing, Bool} └──────────────────── ┌ is_isomorphic(g::DenseNautyGraph, h::DenseNautyGraph) @ NautyGraphs /home/pkgeval/.julia/packages/NautyGraphs/4mQ8n/src/nauty.jl:208 │ non-boolean `Missing` found in boolean context (1/2 union split): goto %59 if not canong NautyGraphs.:(==) canonh::Union{Missing, Bool} └──────────────────── Test Summary: | Pass Fail Total Time NautyGraphs | 30336 1 30337 9m09.4s nautygraph | 29813 29813 2m47.4s loops | 210 210 18.8s empty | 18 18 0.6s membership | 1108 1108 2.2s degrees | 404 404 1.0s equality | 12 12 0.5s invalid modifications | 18 18 2.2s labels | 29 29 7.8s copy | 52 52 5.9s blockdiag | 4 4 6.7s conversion | 36 36 3.3s edge iterator | 46 46 1.0s spray | 27876 27876 1m57.5s graphset | 287 287 3.9s nauty | 177 177 15.4s unlabeled | 24 24 4.8s labeled | 10 10 0.5s directed | 14 14 1.3s hash | 20 20 0.0s loops | 8 8 0.3s canonize | 30 30 2.6s iscanon | 56 56 1.0s thread safety | 1 1 3.0s wordtypes | 12 12 1.8s overflow | 2 2 0.1s interface | 2 2 19.5s Graphs API extensions | 13 13 8.5s aqua | 11 11 46.5s JET | 33 1 34 3m30.0s RNG of the outermost testset: Xoshiro(0x4ee7adcb50bf6eab, 0xb5aaa604647247ad, 0xfa75aa4d571a0413, 0x23ac9ac7a2ed881a, 0x4dec2ed0a61712c7) ERROR: LoadError: Some tests did not pass: 30336 passed, 1 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/NautyGraphs/4mQ8n/test/runtests.jl:9 Testing failed after 565.51s ERROR: LoadError: Package NautyGraphs errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2538 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2387 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:552 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:157 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:156 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [10] include(mod::Module, _path::String) @ Base ./Base.jl:306 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:317 [12] _start() @ Base ./client.jl:550 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 939.83s: package has test failures