Package evaluation to test MLJ on Julia 1.12.7-DEV.43 (fe4faaea78*) started at 2026-06-22T01:52:34.690 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 8.63s ################################################################################ # Installation # Installing MLJ... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [add582a8] + MLJ v0.23.2 Updating `~/.julia/environments/v1.12/Manifest.toml` [da404889] + ARFFFiles v1.6.0 [79e6a3ab] + Adapt v4.6.1 [66dad0bd] + AliasTables v1.1.3 [a9b6321e] + Atomix v1.1.3 [50ba71b6] + BitBasis v0.9.10 [d1d4a3ce] + BitFlags v0.1.10 [49dc2e85] + Calculus v0.5.2 [324d7699] + CategoricalArrays v1.1.1 [af321ab8] + CategoricalDistributions v0.2.2 [d360d2e6] + ChainRulesCore v1.26.1 [944b1d66] + CodecZlib v0.7.8 [3da002f7] + ColorTypes v0.12.1 [861a8166] + Combinatorics v1.1.0 [34da2185] + Compat v4.18.1 [ed09eef8] + ComputationalResources v0.3.2 [f0e56b4a] + ConcurrentUtilities v2.5.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.5 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.127 [ffbed154] + DocStringExtensions v0.9.5 [792122b4] + EarlyStopping v0.3.0 [460bff9d] + ExceptionUnwrapping v0.1.11 [33837fe5] + FeatureSelection v0.2.6 [1a297f60] + FillArrays v1.16.0 ⌅ [53c48c17] + FixedPointNumbers v0.8.6 [46192b85] + GPUArraysCore v0.2.0 ⌅ [cd3eb016] + HTTP v1.11.0 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [b3c1a2ee] + IterationControl v0.5.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.8.0 [682c06a0] + JSON v1.6.1 [63c18a36] + KernelAbstractions v0.9.41 [b964fa9f] + LaTeXStrings v1.4.0 [a5e1c1ea] + LatinHypercubeSampling v1.9.0 [92ad9a40] + LearnAPI v2.0.1 [2ab3a3ac] + LogExpFunctions v1.0.1 [e6f89c97] + LoggingExtras v1.2.0 [c2834f40] + MLCore v1.0.2 [add582a8] + MLJ v0.23.2 [45f359ea] + MLJBalancing v0.1.6 [a7f614a8] + MLJBase v1.13.1 [50ed68f4] + MLJEnsembles v0.4.5 [614be32b] + MLJIteration v0.6.5 [e80e1ace] + MLJModelInterface v1.12.1 [d491faf4] + MLJModels v0.18.8 [23777cdb] + MLJTransforms v0.1.6 [03970b2e] + MLJTuning v0.8.9 [b5d0f7f3] + MLJWrappers v0.1.3 [f1d291b0] + MLUtils v0.4.9 [1914dd2f] + MacroTools v0.5.16 [739be429] + MbedTLS v1.1.10 [eff96d63] + Measurements v2.14.1 [e1d29d7a] + Missings v1.2.0 [872c559c] + NNlib v0.9.36 [8b6db2d4] + OpenML v0.3.3 [4d8831e6] + OpenSSL v1.6.1 ⌅ [bac558e1] + OrderedCollections v1.8.2 [90014a1f] + PDMats v0.11.37 ⌅ [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.6 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [54e16d92] + PrettyPrinting v0.4.2 [08abe8d2] + PrettyTables v3.3.2 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.3 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [321657f4] + ScientificTypes v3.3.0 [30f210dd] + ScientificTypesBase v3.1.0 [7e506255] + ScopedValues v1.6.2 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.10 [605ecd9f] + ShowCases v0.1.0 [777ac1f9] + SimpleBufferStream v1.2.0 [699a6c99] + SimpleTraits v0.9.6 [a2af1166] + SortingAlgorithms v1.2.3 [276daf66] + SpecialFunctions v2.8.0 [860ef19b] + StableRNGs v1.0.4 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [a19d573c] + StatisticalMeasures v0.3.6 [c062fc1d] + StatisticalMeasuresBase v0.1.4 [64bff920] + StatisticalTraits v3.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.12 [4c63d2b9] + StatsFuns v2.2.0 [892a3eda] + StringManipulation v0.4.4 [ec057cc2] + StructUtils v2.8.2 [ab02a1b2] + TableOperations v1.2.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [013be700] + UnsafeAtomics v0.3.1 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.6+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 6.69s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 8099.5 ms ✓ PrettyPrinting 980.0 ms ✓ ChunkCodecCore 5021.7 ms ✓ BSON 4870.2 ms ✓ PartialFunctions 856.5 ms ✓ EnzymeCore → AdaptExt 1076.6 ms ✓ ProgressLogging 1189.9 ms ✓ EarlyStopping 1188.2 ms ✓ RelocatableFolders 1298.0 ms ✓ TableOperations 1510.7 ms ✓ Arpack_jll 943.0 ms ✓ LinearMaps → LinearMapsChainRulesCoreExt 5907.7 ms ✓ Optimisers 1915.1 ms ✓ MLDataDevices 31456.2 ms ✓ GeometryBasics 2599.5 ms ✓ BitBasis 6118.2 ms ✓ ARFFFiles 1145.1 ms ✓ CategoricalArrays → CategoricalArraysSentinelArraysExt 2285.7 ms ✓ MLJWrappers 118534.9 ms ✓ Zygote 16510.7 ms ✓ Clustering 12530.2 ms ✓ NearestNeighborModels 2813.7 ms ✓ KernelAbstractions → EnzymeExt 17313.4 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 4810.1 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 3272.5 ms ✓ NNlib → NNlibEnzymeCoreExt 60750.7 ms ✓ NNlib → NNlibForwardDiffExt 3652.8 ms ✓ OneHotArrays 280134.6 ms ✓ MLJBase 11694.0 ms ✓ MLJEnsembles 1383.6 ms ✓ ChunkCodecLibZstd 1081.7 ms ✓ ChunkCodecLibZlib 3874.7 ms ✓ IterationControl 22159.1 ms ✓ MLJModels 1437.0 ms ✓ Arpack 1031.9 ms ✓ Optimisers → OptimisersEnzymeCoreExt 1115.4 ms ✓ Optimisers → OptimisersAdaptExt 8759.1 ms ✓ MLDataDevices → ChainRulesCoreExt 3961.4 ms ✓ MLDataDevices → MLUtilsExt 1102.8 ms ✓ MLDataDevices → FillArraysExt 1629.8 ms ✓ MLDataDevices → SparseArraysExt 2345.7 ms ✓ MLDataDevices → ChainRulesExt 8060.0 ms ✓ NetworkLayout 21539.5 ms ✓ OpenML 21167.7 ms ✓ MLJTransforms 16177.2 ms ✓ Zygote → ZygoteDistancesExt 119975.1 ms ✓ DifferentiationInterface → DifferentiationInterfaceZygoteExt 106004.0 ms ✓ MLDataDevices → ZygoteExt 36725.6 ms ✓ MLJClusteringInterface 7158.4 ms ✓ NLSolversBase 38906.8 ms ✓ MLDataDevices → OneHotArraysExt 276134.4 ms ✓ MLJBalancing 24663.5 ms ✓ MLJTestInterface 60177.0 ms ✓ MLJBase → DefaultMeasuresExt 19278.6 ms ✓ MLJTuning 60173.4 ms ✓ JLD2 22971.6 ms ✓ MLJIteration 7016.5 ms ✓ MultivariateStats 34000.6 ms ✓ MLDataDevices → GPUArraysSparseArraysExt 52815.6 ms ✓ EvoTrees 7331.6 ms ✓ LineSearches 343386.6 ms ✓ Flux 5316.2 ms ✓ JLD2 → UnPackExt 67861.2 ms ✓ GPUArrays → JLD2Ext 495137.6 ms ✓ MLJ 14132.6 ms ✓ MLJMultivariateStatsInterface 6890.4 ms ✓ Optim ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 7 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #653 at ./asyncevent.jl:359 jfptr_YY.653_19580.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007bcca4e7c4c0 Total snapshots: 649. Utilization: 0% ╎649 @Base/asyncevent.jl:359 (::Base.var"#653#654"{FileWatching.Pidfile.var… ╎ 649 @Base/asyncevent.jl:185 _trywait(t::Timer) ╎ 649 @Base/condition.jl:136 wait ╎ 649 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.S… ╎ 649 @Base/task.jl:1228 wait() 648╎ 649 @Base/task.jl:1216 poptask(W::Base.IntrusiveLinkedListSynchronize… ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 task_done_hook at ./task.jl:868 jfptr_task_done_hook_44780.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] jl_finish_task at /source/src/task.c:342 start_task at /source/src/task.c:1264 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007c7a6fdc8970 Total snapshots: 641. Utilization: 0% ╎641 @Base/task.jl:868 task_done_hook(t::Task) ╎ 641 @Base/task.jl:1228 wait() 640╎ 641 @Base/task.jl:1216 poptask(W::Base.IntrusiveLinkedListSynchronized{T… [7] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:34 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #653 at ./asyncevent.jl:359 jfptr_YY.653_19580.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 11101112 (Pool: 11100290; Big: 822); GC: 11 PkgEval terminated after 2751.67s: test duration exceeded the time limit