Package evaluation of StructuralIdentifiability on Julia 1.13.0-DEV.140 (fac1ce7906*) started at 2025-03-02T10:35:31.704 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 7.59s ################################################################################ # Installation # Installing StructuralIdentifiability... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [220ca800] + StructuralIdentifiability v0.5.13 Updating `~/.julia/environments/v1.13/Manifest.toml` [c3fe647b] + AbstractAlgebra v0.44.8 [a9b6321e] + Atomix v1.1.1 [861a8166] + Combinatorics v1.0.2 [34da2185] + Compat v4.16.0 [864edb3b] + DataStructures v0.18.20 [e2ba6199] + ExprTools v0.1.10 ⌅ [0b43b601] + Groebner v0.8.3 [18e54dd8] + IntegerMathUtils v0.1.2 [c8e1da08] + IterTools v1.10.0 [692b3bcd] + JLLWrappers v1.7.0 [1914dd2f] + MacroTools v0.5.15 ⌅ [2edaba10] + Nemo v0.48.4 [bac558e1] + OrderedCollections v1.8.0 [3e851597] + ParamPunPam v0.5.2 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [27ebfcd6] + Primes v0.5.6 [92933f4c] + ProgressMeter v1.10.2 [fb686558] + RandomExtensions v0.4.4 [220ca800] + StructuralIdentifiability v0.5.13 [a759f4b9] + TimerOutputs v0.5.28 [013be700] + UnsafeAtomics v0.3.0 [e134572f] + FLINT_jll v300.100.301+0 [656ef2d0] + OpenBLAS32_jll v0.3.29+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [781609d7] + GMP_jll v6.3.0+2 [3a97d323] + MPFR_jll v4.2.1+2 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.45s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 173.46s ################################################################################ # Testing # Testing StructuralIdentifiability Status `/tmp/jl_lS6fLm/Project.toml` [c3fe647b] AbstractAlgebra v0.44.8 [4c88cf16] Aqua v0.8.11 [2a0fbf3d] CPUSummary v0.2.6 [861a8166] Combinatorics v1.0.2 [864edb3b] DataStructures v0.18.20 ⌅ [0b43b601] Groebner v0.8.3 [c8e1da08] IterTools v1.10.0 [1914dd2f] MacroTools v0.5.15 ⌅ [2edaba10] Nemo v0.48.4 [3e851597] ParamPunPam v0.5.2 [aea7be01] PrecompileTools v1.2.1 [27ebfcd6] Primes v0.5.6 [276daf66] SpecialFunctions v2.5.0 [220ca800] StructuralIdentifiability v0.5.13 ⌅ [98d24dd4] TestSetExtensions v2.0.0 [a759f4b9] TimerOutputs v0.5.28 [ade2ca70] Dates v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [44cfe95a] Pkg v1.12.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_lS6fLm/Manifest.toml` [c3fe647b] AbstractAlgebra v0.44.8 [4c88cf16] Aqua v0.8.11 [a9b6321e] Atomix v1.1.1 [2a0fbf3d] CPUSummary v0.2.6 [861a8166] Combinatorics v1.0.2 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.16.0 [adafc99b] CpuId v0.3.1 [864edb3b] DataStructures v0.18.20 [ab62b9b5] DeepDiffs v1.2.0 [ffbed154] DocStringExtensions v0.9.3 [e2ba6199] ExprTools v0.1.10 ⌅ [0b43b601] Groebner v0.8.3 [615f187c] IfElse v0.1.1 [18e54dd8] IntegerMathUtils v0.1.2 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [692b3bcd] JLLWrappers v1.7.0 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.15 ⌅ [2edaba10] Nemo v0.48.4 [bac558e1] OrderedCollections v1.8.0 [3e851597] ParamPunPam v0.5.2 [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [27ebfcd6] Primes v0.5.6 [92933f4c] ProgressMeter v1.10.2 [fb686558] RandomExtensions v0.4.4 [276daf66] SpecialFunctions v2.5.0 [aedffcd0] Static v1.1.1 [220ca800] StructuralIdentifiability v0.5.13 ⌅ [98d24dd4] TestSetExtensions v2.0.0 [a759f4b9] TimerOutputs v0.5.28 [013be700] UnsafeAtomics v0.3.0 [e134572f] FLINT_jll v300.100.301+0 [656ef2d0] OpenBLAS32_jll v0.3.29+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [781609d7] GMP_jll v6.3.0+2 [deac9b47] LibCURL_jll v8.11.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [3a97d323] MPFR_jll v4.2.1+2 [14a3606d] MozillaCACerts_jll v2024.12.31 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.0.16+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Resolving package versions... Updating `/tmp/jl_lS6fLm/Project.toml` [961ee093] + ModelingToolkit v9.64.3 Updating `/tmp/jl_lS6fLm/Manifest.toml` [47edcb42] + ADTypes v1.13.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.2.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.18.0 [4c555306] + ArrayLayouts v1.11.1 [e2ed5e7c] + Bijections v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] + BlockArrays v1.4.0 [70df07ce] + BracketingNonlinearSolve v1.1.0 [00ebfdb7] + CSTParser v3.4.3 [d360d2e6] + ChainRulesCore v1.25.1 [fb6a15b2] + CloseOpenIntervals v0.1.13 [a80b9123] + CommonMark v0.8.15 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [b152e2b5] + CompositeTypes v0.1.4 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.5.8 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [2b5f629d] + DiffEqBase v6.164.1 [459566f4] + DiffEqCallbacks v4.3.0 [77a26b50] + DiffEqNoiseProcess v5.24.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.6.42 [8d63f2c5] + DispatchDoctor v0.4.19 [31c24e10] + Distributions v0.25.117 [5b8099bc] + DomainSets v0.7.15 [7c1d4256] + DynamicPolynomials v0.6.1 [06fc5a27] + DynamicQuantities v1.4.0 [4e289a0a] + EnumX v1.0.4 [f151be2c] + EnzymeCore v0.8.8 ⌅ [6b7a57c9] + Expronicon v0.8.5 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.1.1 [1a297f60] + FillArrays v1.13.0 [64ca27bc] + FindFirstFunctions v1.4.1 [6a86dc24] + FiniteDiff v2.27.0 [1fa38f19] + Format v1.3.7 [f6369f11] + ForwardDiff v0.10.38 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [d9f16b24] + Functors v0.5.2 [46192b85] + GPUArraysCore v0.2.0 [c27321d9] + Glob v1.3.1 [86223c79] + Graphs v1.12.0 [34004b35] + HypergeometricFunctions v0.3.27 [d25df0c9] + Inflate v0.1.5 [8197267c] + IntervalSets v0.7.10 [3587e190] + InverseFunctions v0.1.17 [82899510] + IteratorInterfaceExtensions v1.0.0 [ae98c720] + Jieko v0.2.1 [98e50ef6] + JuliaFormatter v1.0.62 [ccbc3e58] + JumpProcesses v9.14.2 [ba0b0d4f] + Krylov v0.9.10 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.6 [10f19ff3] + LayoutPointers v0.1.17 [5078a376] + LazyArrays v2.6.1 [87fe0de2] + LineSearch v0.1.4 [d3d80556] + LineSearches v7.3.0 [7ed4a6bd] + LinearSolve v3.4.0 [d8e11817] + MLStyle v0.4.17 [d125e4d3] + ManualMemory v0.1.8 [bb5d69b7] + MaybeInplace v0.1.4 [e1d29d7a] + Missings v1.2.0 [961ee093] + ModelingToolkit v9.64.3 [2e0e35c7] + Moshi v0.3.5 [46d2c3a1] + MuladdMacro v0.2.4 [102ac46a] + MultivariatePolynomials v0.5.7 [d8a4904e] + MutableArithmetics v1.6.4 [d41bc354] + NLSolversBase v7.8.3 [77ba4419] + NaNMath v1.1.2 [8913a72c] + NonlinearSolve v4.4.0 [be0214bd] + NonlinearSolveBase v1.5.0 [5959db7a] + NonlinearSolveFirstOrder v1.3.0 [9a2c21bd] + NonlinearSolveQuasiNewton v1.2.0 [26075421] + NonlinearSolveSpectralMethods v1.1.0 [6fe1bfb0] + OffsetArrays v1.15.0 [429524aa] + Optim v1.11.0 [90014a1f] + PDMats v0.11.32 [d96e819e] + Parameters v0.12.3 [e409e4f3] + PoissonRandom v0.4.4 [f517fe37] + Polyester v0.7.16 [1d0040c9] + PolyesterWeave v0.2.2 [85a6dd25] + PositiveFactorizations v0.2.4 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [74087812] + Random123 v1.7.0 [e6cf234a] + RandomNumbers v1.6.0 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.31.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [ae5879a3] + ResettableStacks v1.1.1 [79098fc4] + Rmath v0.8.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.13 [9dfe8606] + SCCNonlinearSolve v1.0.0 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.75.1 [19f34311] + SciMLJacobianOperators v0.1.1 [c0aeaf25] + SciMLOperators v0.3.12 [53ae85a6] + SciMLStructures v1.6.1 [efcf1570] + Setfield v1.1.2 [727e6d20] + SimpleNonlinearSolve v2.1.0 [699a6c99] + SimpleTraits v0.9.4 [a2af1166] + SortingAlgorithms v1.2.1 [0a514795] + SparseMatrixColorings v0.4.13 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.3.2 [7792a7ef] + StrideArraysCore v0.5.7 [2efcf032] + SymbolicIndexingInterface v0.3.38 [19f23fe9] + SymbolicLimits v0.2.2 [d1185830] + SymbolicUtils v3.16.0 [0c5d862f] + Symbolics v6.29.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [8ea1fca8] + TermInterface v2.0.0 [1c621080] + TestItems v1.0.0 [8290d209] + ThreadingUtilities v0.5.2 [0796e94c] + Tokenize v0.5.29 [410a4b4d] + Tricks v0.1.10 [781d530d] + TruncatedStacktraces v1.4.0 [5c2747f8] + URIs v1.5.1 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.22.0 [a7c27f48] + Unityper v0.1.6 [897b6980] + WeakValueDicts v0.1.0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [856f044c] + MKL_jll v2025.0.1+1 [f50d1b31] + Rmath_jll v0.5.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [9fa8497b] + Future v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [a63ad114] + Mmap v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [4607b0f0] + SuiteSparse Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Resolving package versions... Updating `/tmp/jl_lS6fLm/Project.toml` [0c5d862f] + Symbolics v6.29.2 No packages added to or removed from `/tmp/jl_lS6fLm/Manifest.toml` Precompiling packages... 5845.4 ms ✓ TruncatedStacktraces 3056.5 ms ✓ DispatchDoctor 1261.3 ms ✓ Functors 1183.4 ms ✓ ResettableStacks 1196.4 ms ✓ DifferentiationInterface → DifferentiationInterfaceStaticArraysExt 2461.9 ms ✓ LazyArrays → LazyArraysStaticArraysExt 33135.9 ms ✓ JuliaFormatter 4084.8 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 13584.0 ms ✓ Graphs 14138.7 ms ✓ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt 5256.4 ms ✓ SciMLBase → SciMLBaseMLStyleExt 3920.5 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 63277.6 ms ✓ SciMLJacobianOperators 3773.3 ms ✓ SCCNonlinearSolve 3752.8 ms ✓ FastPower → FastPowerForwardDiffExt 2337.6 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 4536.6 ms ✓ NLSolversBase 4301.9 ms ✓ StrideArraysCore 3839.9 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 14720.1 ms ✓ Distributions 7713.0 ms ✓ DynamicQuantities 814.5 ms ✓ DispatchDoctor → DispatchDoctorEnzymeCoreExt 1230.2 ms ✓ DispatchDoctor → DispatchDoctorChainRulesCoreExt 39585.9 ms ✓ SymbolicUtils 23863.4 ms ✓ LinearSolve 13615.7 ms ✓ NonlinearSolveBase 8314.0 ms ✓ LineSearch 4881.7 ms ✓ LineSearches 2463.1 ms ✓ Polyester 3303.6 ms ✓ Distributions → DistributionsTestExt 3314.6 ms ✓ Distributions → DistributionsChainRulesCoreExt 3036.7 ms ✓ DynamicQuantities → DynamicQuantitiesUnitfulExt 1307.0 ms ✓ DynamicQuantities → DynamicQuantitiesLinearAlgebraExt 6931.0 ms ✓ SymbolicLimits 3888.5 ms ✓ LinearSolve → LinearSolveEnzymeExt 6974.8 ms ✓ LinearSolve → LinearSolveSparseArraysExt 3147.9 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseMatrixColoringsExt 4661.5 ms ✓ NonlinearSolveBase → NonlinearSolveBaseForwardDiffExt 2783.1 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseArraysExt 3726.7 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLinearSolveExt 6606.8 ms ✓ BracketingNonlinearSolve 2645.9 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLineSearchExt 11318.4 ms ✓ Optim 62190.4 ms ✓ LineSearch → LineSearchLineSearchesExt 3471.8 ms ✓ FastBroadcast 201116.2 ms ✓ Symbolics 33834.1 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveForwardDiffExt 15053.7 ms ✓ RecursiveArrayTools → RecursiveArrayToolsFastBroadcastExt 14756.2 ms ✓ Symbolics → SymbolicsForwardDiffExt 12921.3 ms ✓ DifferentiationInterface → DifferentiationInterfaceSymbolicsExt 42271.5 ms ✓ SimpleNonlinearSolve 15703.7 ms ✓ DiffEqBase 5467.4 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveChainRulesCoreExt 5213.6 ms ✓ DiffEqBase → DiffEqBaseChainRulesCoreExt 7638.5 ms ✓ DiffEqBase → DiffEqBaseUnitfulExt 7449.4 ms ✓ DiffEqBase → DiffEqBaseForwardDiffExt 5743.8 ms ✓ DiffEqBase → DiffEqBaseDistributionsExt 4529.7 ms ✓ DiffEqBase → DiffEqBaseSparseArraysExt 10250.1 ms ✓ DiffEqCallbacks 4181.0 ms ✓ NonlinearSolveBase → NonlinearSolveBaseDiffEqBaseExt 5631.5 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveDiffEqBaseExt 26179.5 ms ✓ JumpProcesses 34936.8 ms ✓ DiffEqNoiseProcess 17735.1 ms ✓ NonlinearSolveSpectralMethods 80444.7 ms ✓ NonlinearSolveQuasiNewton 49704.7 ms ✓ NonlinearSolveFirstOrder 6172.5 ms ✓ NonlinearSolveSpectralMethods → NonlinearSolveSpectralMethodsForwardDiffExt 8299.5 ms ✓ NonlinearSolveQuasiNewton → NonlinearSolveQuasiNewtonForwardDiffExt 46829.0 ms ✓ NonlinearSolve Info Given ModelingToolkit was explicitly requested, output will be shown live  WARNING: llvmcall with integer pointers is deprecated. Use actual pointers instead, replacing i32 or i64 with i8* or ptr in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl WARNING: Detected access to binding `ModelingToolkit.SystemStructure` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. WARNING: Detected access to binding `ModelingToolkit.SparseMatrixCLIL` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. WARNING: Detected access to binding `BipartiteGraphs.BipartiteGraph` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. WARNING: Detected access to binding `ModelingToolkit.ODESystem` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. WARNING: Detected access to binding `ModelingToolkit.TearingState` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. WARNING: Detected access to binding `ModelingToolkit.ClockInference` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. WARNING: llvmcall with integer pointers is deprecated. Use actual pointers instead, replacing i32 or i64 with i8* or ptr in var"#bareiss_update_virtual_colswap_mtk!#1499"(Any, ModelingToolkit.var"#bareiss_update_virtual_colswap_mtk!", Any, ModelingToolkit.SparseMatrixCLIL{T, Ti} where Ti<:Integer where T, Any, Any, Any, Any) at /home/pkgeval/.julia/packages/ModelingToolkit/8S2W1/src/systems/sparsematrixclil.jl WARNING: Detected access to binding `ModelingToolkit.NonlinearSystem` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. WARNING: Detected access to binding `ModelingToolkit.InitializationSystemMetadata` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. 309703.5 ms ✓ ModelingToolkit 51538.2 ms ✓ ModelingToolkit → MTKChainRulesCoreExt 71 dependencies successfully precompiled in 1448 seconds. 226 already precompiled. 25 dependencies had output during precompilation: ┌ NonlinearSolveBase → NonlinearSolveBaseDiffEqBaseExt │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ DiffEqBase → DiffEqBaseDistributionsExt │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ DynamicQuantities │ WARNING: Constructor for type "Rational" was extended in `DynamicQuantities` without explicit qualification or import. │ NOTE: Assumed "Rational" refers to `Base.Rational`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Rational end`. │ Hint: To silence the warning, qualify `Rational` as `Base.Rational` in the method signature or explicitly `import Base: Rational`. │ WARNING: Constructor for type "Bool" was extended in `DynamicQuantities` without explicit qualification or import. │ NOTE: Assumed "Bool" refers to `Base.Bool`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Bool end`. │ Hint: To silence the warning, qualify `Bool` as `Base.Bool` in the method signature or explicitly `import Base: Bool`. │ WARNING: Constructor for type "Complex" was extended in `DynamicQuantities` without explicit qualification or import. │ NOTE: Assumed "Complex" refers to `Base.Complex`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Complex end`. │ Hint: To silence the warning, qualify `Complex` as `Base.Complex` in the method signature or explicitly `import Base: Complex`. └ ┌ DiffEqBase │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ ModelingToolkit → MTKChainRulesCoreExt │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ DiffEqBase → DiffEqBaseSparseArraysExt │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ NonlinearSolve │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ DiffEqNoiseProcess │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ SimpleNonlinearSolve → SimpleNonlinearSolveDiffEqBaseExt │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ NonlinearSolveSpectralMethods → NonlinearSolveSpectralMethodsForwardDiffExt │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ ModelingToolkit │ [Output was shown above] └ ┌ NonlinearSolveQuasiNewton │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ DiffEqBase → DiffEqBaseUnitfulExt │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ DiffEqCallbacks │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ DiffEqBase → DiffEqBaseChainRulesCoreExt │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ NonlinearSolveFirstOrder │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl │ WARNING: Detected access to binding `NonlinearSolveFirstOrder.GeneralizedFirstOrderAlgorithm` in a world prior to its definition world. │ Julia 1.12 has introduced more strict world age semantics for global bindings. │ !!! This code may malfunction under Revise. │ !!! This code will error in future versions of Julia. │ Hint: Add an appropriate `invokelatest` around the access to this binding. └ ┌ NonlinearSolveQuasiNewton → NonlinearSolveQuasiNewtonForwardDiffExt │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ Polyester │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ StrideArraysCore │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ NonlinearSolveSpectralMethods │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ FastBroadcast │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ RecursiveArrayTools → RecursiveArrayToolsFastBroadcastExt │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ SimpleNonlinearSolve │ WARNING: Detected access to binding `SimpleNonlinearSolve.SimpleNewtonRaphson` in a world prior to its definition world. │ Julia 1.12 has introduced more strict world age semantics for global bindings. │ !!! This code may malfunction under Revise. │ !!! This code will error in future versions of Julia. │ Hint: Add an appropriate `invokelatest` around the access to this binding. └ ┌ JumpProcesses │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ DiffEqBase → DiffEqBaseForwardDiffExt │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ WARNING: llvmcall with integer pointers is deprecated. Use actual pointers instead, replacing i32 or i64 with i8* or ptr in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl Precompiling packages... 25832.3 ms ✓ Groebner → GroebnerDynamicPolynomialsExt 1 dependency successfully precompiled in 26 seconds. 45 already precompiled. Precompiling packages... Info Given SymbolicsNemoExt was explicitly requested, output will be shown live  [ Info: Assuming ((1//128)*(√((5120//1)*(a^4)) - (80//1)*(a^2))) != 0 [ Info: Assuming ((1//128)*(√((5120//1)*(a^4)) - (80//1)*(a^2))) != 0 116957.9 ms ✓ Symbolics → SymbolicsNemoExt 1 dependency successfully precompiled in 118 seconds. 161 already precompiled. 1 dependency had output during precompilation: ┌ Symbolics → SymbolicsNemoExt │ [Output was shown above] └ Precompiling packages... 27456.5 ms ✓ Symbolics → SymbolicsGroebnerExt 1 dependency successfully precompiled in 29 seconds. 166 already precompiled. Precompiling packages... Info Given MTKDeepDiffsExt was explicitly requested, output will be shown live  WARNING: llvmcall with integer pointers is deprecated. Use actual pointers instead, replacing i32 or i64 with i8* or ptr in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl 51540.5 ms ✓ ModelingToolkit → MTKDeepDiffsExt 1 dependency successfully precompiled in 53 seconds. 298 already precompiled. 1 dependency had output during precompilation: ┌ ModelingToolkit → MTKDeepDiffsExt │ [Output was shown above] └ Precompiling packages... Info Given ModelingToolkitSIExt was explicitly requested, output will be shown live  WARNING: llvmcall with integer pointers is deprecated. Use actual pointers instead, replacing i32 or i64 with i8* or ptr in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl 76202.1 ms ✓ StructuralIdentifiability → ModelingToolkitSIExt 1 dependency successfully precompiled in 78 seconds. 315 already precompiled. 1 dependency had output during precompilation: ┌ StructuralIdentifiability → ModelingToolkitSIExt │ [Output was shown above] └ [ Info: Testing started [ Info: Summary of the model: [ Info: State variables: x1, x2 [ Info: Parameters: a [ Info: Inputs: [ Info: Outputs: y ┌ Warning: New variable c, treating as a scalar parameter └ @ StructuralIdentifiability ~/.julia/packages/StructuralIdentifiability/tZdGp/src/pb_representation.jl:94 [ Info: Summary of the model: [ Info: State variables: x1, x2, x3 [ Info: Parameters: a [ Info: Inputs: u [ Info: Outputs: y1, y2 [ Info: Summary of the model: [ Info: State variables: a [ Info: Parameters: b [ Info: Inputs: c [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: a, b [ Info: Parameters: k1, k2 [ Info: Inputs: c [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: x [ Info: Parameters: a [ Info: Inputs: [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: x [ Info: Parameters: a [ Info: Inputs: [ Info: Outputs: y1, y2 [ Info: Summary of the model: [ Info: State variables: x, y [ Info: Parameters: a, b [ Info: Inputs: [ Info: Outputs: y1, y2 [ Info: Summary of the model: [ Info: State variables: x, y [ Info: Parameters: a, b [ Info: Inputs: [ Info: Outputs: y1, y2 [ Info: Summary of the model: [ Info: State variables: x, y [ Info: Parameters: a, b [ Info: Inputs: [ Info: Outputs: y1, y2 [ Info: Summary of the model: [ Info: State variables: x, y [ Info: Parameters: a, b [ Info: Inputs: [ Info: Outputs: y1, y2 [ Info: Summary of the model: [ Info: State variables: x [ Info: Parameters: a [ Info: Inputs: u [ Info: Outputs: y 2.050132 seconds (854.92 k allocations: 44.847 MiB, 99.49% compilation time) 0.002023 seconds (7.31 k allocations: 330.398 KiB) 0.001888 seconds (11.00 k allocations: 496.281 KiB) 0.001841 seconds (10.96 k allocations: 490.719 KiB) 0.002449 seconds (14.71 k allocations: 645.789 KiB) 0.001229 seconds (8.13 k allocations: 370.938 KiB) 0.000897 seconds (7.52 k allocations: 304.117 KiB) 15.373816 seconds (6.35 M allocations: 334.333 MiB, 2.30% gc time, 99.78% compilation time) [ Info: Summary of the model: [ Info: State variables: x [ Info: Parameters: a [ Info: Inputs: [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: x1, x2 [ Info: Parameters: [ Info: Inputs: u [ Info: Outputs: y 0.329735 seconds (97.75 k allocations: 5.307 MiB, 98.30% compilation time) [ Info: Summary of the model: [ Info: State variables: x1, x2 [ Info: Parameters: [ Info: Inputs: u [ Info: Outputs: y 0.011983 seconds (9.57 k allocations: 536.789 KiB, 90.36% compilation time) [ Info: Summary of the model: [ Info: State variables: x [ Info: Parameters: a, b [ Info: Inputs: u [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: x1, x2, x3 [ Info: Parameters: a [ Info: Inputs: u [ Info: Outputs: y1, y2 IOEQS: Dict{QQMPolyRingElem, QQMPolyRingElem}(y1(t)_2 => -y1(t)_0 + y1(t)_2, y2(t)_1 => -a*y2(t)_0 + a*u(t)_0 + y2(t)_1 - u(t)_1) [ Info: Summary of the model: [ Info: State variables: x0, x1 [ Info: Parameters: a01, a12, a21 [ Info: Inputs: [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: x1, x2 [ Info: Parameters: [ Info: Inputs: [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: x0, x1 [ Info: Parameters: a, b, c, d [ Info: Inputs: u [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: S, I, W, R [ Info: Parameters: a, bi, bw, gam, k, mu, xi [ Info: Inputs: [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: x1, x2, x3, x4 [ Info: Parameters: alpha, b, beta, c, delta, gama, sigma [ Info: Inputs: [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: x1, x2 [ Info: Parameters: b [ Info: Inputs: [ Info: Outputs: y1, y2 [ Info: Summary of the model: [ Info: State variables: x1, x2 [ Info: Parameters: a1, a2, a21 [ Info: Inputs: [ Info: Outputs: y1 [ Info: Summary of the model: [ Info: State variables: x1, x2 [ Info: Parameters: a1, a2, a21 [ Info: Inputs: u [ Info: Outputs: y1 [ Info: Summary of the model: [ Info: State variables: x1, x2, x3 [ Info: Parameters: a01, a12, a13, a21, a31 [ Info: Inputs: u [ Info: Outputs: y [ Info: Summary of the model: [ Info: State variables: S, E, In [ Info: Parameters: N, a, b, nu [ Info: Inputs: [ Info: Outputs: y1, y2 [ Info: Assessing local identifiability [ Info: Assessing global identifiability [ Info: Computing IO-equations [ Info: Computed IO-equations in 0.002788654 seconds [ Info: Computing Wronskians [ Info: Computed Wronskians in 6.516215859 seconds [ Info: Dimensions of the Wronskians [3] [ Info: Ranks of the Wronskians computed in 0.061043234 seconds [ Info: Global identifiability assessed in 7.384551434 seconds [ Info: Assessing local identifiability [ Info: Assessing global identifiability [ Info: Functions to check involve states [ Info: Computing IO-equations [ Info: Computed IO-equations in 0.002428087 seconds [ Info: No parameters, so Wronskian computation is not needed [ Info: Global identifiability assessed in 0.792684548 seconds [ Info: Assessing local identifiability [ Info: Assessing global identifiability [ Info: Global identifiability assessed in 4.507e-5 seconds [ Info: Assessing local identifiability [ Info: Assessing global identifiability [ Info: Functions to check involve states [ Info: Computing IO-equations [ Info: Computed IO-equations in 0.03287224 seconds [ Info: Computing Wronskians [ Info: Computed Wronskians in 0.319107868 seconds [ Info: Dimensions of the Wronskians [5] [ Info: Ranks of the Wronskians computed in 5.0069e-5 seconds [ Info: Simplifying generating set. Simplification level: standard ⌜ # Computing specializations.. Time: 0:00:13 ✓ # Computing specializations.. Time: 0:00:15 [ Info: Computing normal forms of degree 2 in 4 variables [ Info: Used 4 specializations in 15.49778806 seconds, found 3 relations [ Info: Computing 5 Groebner bases for degrees (3, 3) for block orderings ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 29 running 1 of 2 signal (10): User defined signal 1 unknown function (ip: 0x791708241f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#400 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:332 #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_59880.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2290 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) _ZN4llvm12PatternMatch12MaxMin_matchINS_8ICmpInstENS0_7bind_tyINS_5ValueEEES5_NS0_12smin_pred_tyELb0EE5matchIS4_EEbPT_ at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) unknown function (ip: 0x1f) at (unknown file) _ZL16simplifyICmpInstjPN4llvm5ValueES1_RKNS_13SimplifyQueryEj at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZL31simplifyInstructionWithOperandsPN4llvm11InstructionENS_8ArrayRefIPNS_5ValueEEERKNS_13SimplifyQueryEj at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZN4llvm19simplifyInstructionEPNS_11InstructionERKNS_13SimplifyQueryE at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZN12_GLOBAL__N_18EarlyCSE11processNodeEPN4llvm15DomTreeNodeBaseINS1_10BasicBlockEEE.isra.0 at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZN12_GLOBAL__N_18EarlyCSE3runEv at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZN4llvm12EarlyCSEPass3runERNS_8FunctionERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:90 _ZN4llvm11PassManagerINS_8FunctionENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:90 _ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:90 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) run at /source/src/pipeline.cpp:777 operator() at /source/src/jitlayers.cpp:1581 withModuleDo<(anonymous namespace)::sizedOptimizerT::operator()(llvm::orc::ThreadSafeModule) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1542 [inlined] operator() at /source/src/jitlayers.cpp:1694 [inlined] addModule at /source/src/jitlayers.cpp:2153 jl_compile_codeinst_now at /source/src/jitlayers.cpp:626 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:946 jl_compile_method_internal at /source/src/gf.c:2985 _jl_invoke at /source/src/gf.c:3467 [inlined] ijl_apply_generic at /source/src/gf.c:3675 #generating_sets_fan#324 at ./none (unknown line) generating_sets_fan at ./none (unknown line) unknown function (ip: 0x7916d66a7a60) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 #simplified_generating_set#326 at ./none (unknown line) simplified_generating_set at ./none (unknown line) unknown function (ip: 0x7916d6ba0561) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 #initial_identifiable_functions#333 at ./none (unknown line) initial_identifiable_functions at ./none (unknown line) [inlined] #check_identifiability#349 at ./none (unknown line) check_identifiability at ./none (unknown line) [inlined] #assess_global_identifiability#364 at ./none (unknown line) assess_global_identifiability at ./none (unknown line) [inlined] macro expansion at ./timing.jl:461 [inlined] #_assess_identifiability#538 at /home/pkgeval/.julia/packages/StructuralIdentifiability/tZdGp/src/StructuralIdentifiability.jl:168 _assess_identifiability at /home/pkgeval/.julia/packages/StructuralIdentifiability/tZdGp/src/StructuralIdentifiability.jl:134 [inlined] #534 at /home/pkgeval/.julia/packages/StructuralIdentifiability/tZdGp/src/StructuralIdentifiability.jl:115 with_logstate at ./logging/logging.jl:534 with_logger at ./logging/logging.jl:644 [inlined] #assess_identifiability#531 at /home/pkgeval/.julia/packages/StructuralIdentifiability/tZdGp/src/StructuralIdentifiability.jl:113 [inlined] assess_identifiability at /home/pkgeval/.julia/packages/StructuralIdentifiability/tZdGp/src/StructuralIdentifiability.jl:104 unknown function (ip: 0x7916d6b8b1c6) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2290 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_body at /source/src/interpreter.c:580 eval_body at /source/src/interpreter.c:557 eval_body at /source/src/interpreter.c:557 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897 jl_toplevel_eval_flex at /source/src/toplevel.c:1032 jl_toplevel_eval_flex at /source/src/toplevel.c:972 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 eval at ./boot.jl:488 include_string at ./loading.jl:2855 _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 _include at ./loading.jl:2915 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_117145.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 macro expansion at /home/pkgeval/.julia/packages/StructuralIdentifiability/tZdGp/test/runtests.jl:151 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:1771 [inlined] macro expansion at /home/pkgeval/.julia/packages/StructuralIdentifiability/tZdGp/test/runtests.jl:150 [inlined] macro expansion at ./timing.jl:621 [inlined] top-level scope at /home/pkgeval/.julia/packages/StructuralIdentifiability/tZdGp/test/runtests.jl:353 _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_invoke at /source/src/gf.c:3482 jl_toplevel_eval_flex at /source/src/toplevel.c:1021 jl_toplevel_eval_flex at /source/src/toplevel.c:972 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 eval at ./boot.jl:488 include_string at ./loading.jl:2855 _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 _include at ./loading.jl:2915 include at ./Base.jl:307 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_117145.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2290 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:692 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897 jl_toplevel_eval_flex at /source/src/toplevel.c:1032 jl_toplevel_eval_flex at /source/src/toplevel.c:972 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 eval at ./boot.jl:488 exec_options at ./client.jl:294 _start at ./client.jl:560 jfptr__start_63965.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2290 [inlined] true_main at /source/src/jlapi.c:964 jl_repl_entrypoint at /source/src/jlapi.c:1124 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7917081e3249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 2 signal (10): User defined signal 1 unknown function (ip: 0x7aa618c34f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#400 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:332 #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_59880.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2290 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#400 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 jfptr_wait_79915.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 subprocess_handler at /source/usr/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2404 unknown function (ip: 0x7aa60f28e463) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 #203 at /source/usr/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2344 withenv at ./env.jl:265 #188 at /source/usr/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2165 with_temp_env at /source/usr/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2023 #184 at /source/usr/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2132 #mktempdir#21 at ./file.jl:899 unknown function (ip: 0x7aa60f28395c) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 mktempdir at ./file.jl:895 mktempdir at ./file.jl:895 #sandbox#180 at /source/usr/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2079 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2071 unknown function (ip: 0x7aa60f27a3b9) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 #test#191 at /source/usr/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2329 test at /source/usr/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2241 [inlined] #test#170 at /source/usr/share/julia/stdlib/v1.13/Pkg/src/API.jl:486 test at /source/usr/share/julia/stdlib/v1.13/Pkg/src/API.jl:465 unknown function (ip: 0x7aa60f27a021) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 #test#84 at /source/usr/share/julia/stdlib/v1.13/Pkg/src/API.jl:164 unknown function (ip: 0x7aa60f26fc98) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 test at /source/usr/share/julia/stdlib/v1.13/Pkg/src/API.jl:153 #test#82 at /source/usr/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 test at /source/usr/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.13/Pkg/src/API.jl:151 [inlined] test at /source/usr/share/julia/stdlib/v1.13/Pkg/src/API.jl:151 unknown function (ip: 0x7aa60f26f18f) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2290 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:692 eval_body at /source/src/interpreter.c:557 eval_body at /source/src/interpreter.c:557 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897 jl_toplevel_eval_flex at /source/src/toplevel.c:1032 jl_toplevel_eval_flex at /source/src/toplevel.c:972 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 eval at ./boot.jl:488 include_string at ./loading.jl:2855 _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 _include at ./loading.jl:2915 include at ./Base.jl:306 exec_options at ./client.jl:328 _start at ./client.jl:560 jfptr__start_63965.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2290 [inlined] true_main at /source/src/jlapi.c:964 jl_repl_entrypoint at /source/src/jlapi.c:1124 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7aa618bd6249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (interactive) Task 0x00007aa60ac00010 Total snapshots: 1. Utilization: 0% ╎1 @Base/client.jl:560 _start() ╎ 1 @Base/client.jl:328 exec_options(opts::Base.JLOptions) ╎ 1 @Base/Base.jl:306 include(mod::Module, _path::String) ╎ 1 @Base/loading.jl:2915 _include(mapexpr::Function, mod::Module, _path::S… ╎ 1 @Base/loading.jl:2855 include_string(mapexpr::typeof(identity), mod::M… ╎ 1 @Base/boot.jl:488 eval(m::Module, e::Any) ╎ ╎ 1 @Pkg/src/API.jl:151 kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(… ╎ ╎ 1 @Pkg/src/API.jl:151 #test#81 ╎ ╎ 1 @Pkg/src/API.jl:152 test ╎ ╎ 1 @Pkg/src/API.jl:152 test(pkgs::Vector{String}; kwargs::Base.Pairs… ╎ ╎ 1 @Pkg/src/API.jl:153 kwcall(::@NamedTuple{julia_args::Cmd}, ::typ… ╎ ╎ ╎ 1 @Pkg/src/API.jl:164 test(pkgs::Vector{Pkg.Types.PackageSpec}; i… ╎ ╎ ╎ 1 @Pkg/src/API.jl:465 kwcall(::@NamedTuple{julia_args::Cmd, io::… ╎ ╎ ╎ 1 @Pkg/src/API.jl:486 test(ctx::Pkg.Types.Context, pkgs::Vector… ╎ ╎ ╎ 1 @Pkg/…Operations.jl:2241 test ╎ ╎ ╎ 1 @Pkg/…perations.jl:2329 test(ctx::Pkg.Types.Context, pkgs::… ╎ ╎ ╎ ╎ 1 @Pkg/…perations.jl:2071 kwcall(::@NamedTuple{preferences::… ╎ ╎ ╎ ╎ 1 @Pkg/…perations.jl:2079 #sandbox#180 ╎ ╎ ╎ ╎ 1 @Base/file.jl:895 mktempdir(fn::Function) ╎ ╎ ╎ ╎ 1 @Base/file.jl:895 mktempdir(fn::Function, parent::Strin… ╎ ╎ ╎ ╎ 1 @Base/file.jl:899 mktempdir(fn::Pkg.Operations.var"#18… ╎ ╎ ╎ ╎ ╎ 1 @Pkg/…rations.jl:2132 (::Pkg.Operations.var"#184#185"… ╎ ╎ ╎ ╎ ╎ 1 @Pkg/…rations.jl:2023 with_temp_env(fn::Pkg.Operatio… ╎ ╎ ╎ ╎ ╎ 1 @Pkg/…ations.jl:2165 (::Pkg.Operations.var"#188#189… ╎ ╎ ╎ ╎ ╎ 1 @Base/env.jl:265 withenv(::Pkg.Operations.var"#203… ╎ ╎ ╎ ╎ ╎ 1 @Pkg/…tions.jl:2344 (::Pkg.Operations.var"#203#20… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Pkg/…tions.jl:2404 subprocess_handler(cmd::Cmd,… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…cess.jl:687 wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…cess.jl:694 wait(x::Base.Process, syncd… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ion.jl:136 wait ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ion.jl:141 wait(c::Base.GenericCondit… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…sk.jl:1199 wait() ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…sk.jl:1187 poptask(W::Base.Intrusiv… Thread 2 (default) Task 0x00007aa60ac00100 Total snapshots: 1. Utilization: 0% ╎1 @Base/Base.jl:352 (::Base.var"#start_profile_listener##0#start_profile_lis… ╎ 1 @Base/Base.jl:332 profile_printing_listener(cond::Base.AsyncCondition) ╎ 1 @Base/asyncevent.jl:185 _trywait(t::Base.AsyncCondition) ╎ 1 @Base/condition.jl:136 wait ╎ 1 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.Spin… ╎ 1 @Base/task.jl:1199 wait() ╎ ╎ 1 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSynchronized{T… [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 unknown function (ip: 0x7aa618c34f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 [29] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/StructuralIdentifiability/tZdGp/test/identifiability.jl:1 unknown function (ip: 0x791708241f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 poptask at ./task.jl:1187 poptask at ./task.jl:1187 wait at ./task.jl:1199 wait at ./task.jl:1199 #wait#400 at ./condition.jl:141 #wait#400 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:332 profile_printing_listener at ./Base.jl:332 #start_profile_listener##0 at ./Base.jl:352 #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_59880.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2290 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 jfptr_YY.start_profile_listenerYY.YY.0_59880.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2290 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) poptask at ./task.jl:1187 _ZN4llvm12DemandedBits15performAnalysisEv.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZN4llvm12DemandedBits15getDemandedBitsEPNS_11InstructionE at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZN4llvm13slpvectorizer7BoUpSLP24computeMinimumValueSizesEv at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZN4llvm17SLPVectorizerPass18tryToVectorizeListENS_8ArrayRefIPNS_5ValueEEERNS_13slpvectorizer7BoUpSLPEb at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZN4llvm17SLPVectorizerPass14tryToVectorizeEPNS_11InstructionERNS_13slpvectorizer7BoUpSLPE at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZN4llvm17SLPVectorizerPass14tryToVectorizeENS_8ArrayRefINS_14WeakTrackingVHEEERNS_13slpvectorizer7BoUpSLPE at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) wait at ./task.jl:1199 _ZN4llvm17SLPVectorizerPass24vectorizeRootInstructionEPNS_7PHINodeEPNS_11InstructionEPNS_10BasicBlockERNS_13slpvectorizer7BoUpSLPEPNS_19TargetTransformInfoE.constprop.0 at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZN4llvm17SLPVectorizerPass22vectorizeChainsInBlockEPNS_10BasicBlockERNS_13slpvectorizer7BoUpSLPE at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) #wait#400 at ./condition.jl:141 _ZN4llvm17SLPVectorizerPass7runImplERNS_8FunctionEPNS_15ScalarEvolutionEPNS_19TargetTransformInfoEPNS_17TargetLibraryInfoEPNS_9AAResultsEPNS_8LoopInfoEPNS_13DominatorTreeEPNS_15AssumptionCacheEPNS_12DemandedBitsEPNS_25OptimizationRemarkEmitterE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZN4llvm17SLPVectorizerPass3runERNS_8FunctionERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:90 _ZN4llvm11PassManagerINS_8FunctionENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:90 _ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:90 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) run at /source/src/pipeline.cpp:777 operator() at /source/src/jitlayers.cpp:1581 wait at ./condition.jl:136 [inlined] wait at ./process.jl:694 withModuleDo<(anonymous namespace)::sizedOptimizerT::operator()(llvm::orc::ThreadSafeModule) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1542 [inlined] operator() at /source/src/jitlayers.cpp:1694 [inlined] addModule at /source/src/jitlayers.cpp:2153 jl_compile_codeinst_now at /source/src/jitlayers.cpp:626 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:946 jl_compile_method_internal at /source/src/gf.c:2985 _jl_invoke at /source/src/gf.c:3467 [inlined] ijl_apply_generic at /source/src/gf.c:3675 __groebner_learn1 at /home/pkgeval/.julia/packages/Groebner/kmkwE/src/groebner/learn_apply.jl:61 _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 _groebner_learn1 at /home/pkgeval/.julia/packages/Groebner/kmkwE/src/groebner/learn_apply.jl:37 _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 groebner_learn0 at /home/pkgeval/.julia/packages/Groebner/kmkwE/src/groebner/learn_apply.jl:13 #groebner_learn#163 at /home/pkgeval/.julia/packages/Groebner/kmkwE/src/interface.jl:317 [inlined] groebner_learn at /home/pkgeval/.julia/packages/Groebner/kmkwE/src/interface.jl:315 unknown function (ip: 0x7916d66e1cda) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 #discover_shape!#60 at /home/pkgeval/.julia/packages/ParamPunPam/wEEQO/src/groebner/paramgb.jl:187 discover_shape! at /home/pkgeval/.julia/packages/ParamPunPam/wEEQO/src/groebner/paramgb.jl:169 [inlined] _paramgb at /home/pkgeval/.julia/packages/ParamPunPam/wEEQO/src/groebner/paramgb.jl:129 #paramgb#56 at /home/pkgeval/.julia/packages/ParamPunPam/wEEQO/src/groebner/paramgb.jl:103 paramgb at /home/pkgeval/.julia/packages/ParamPunPam/wEEQO/src/groebner/paramgb.jl:60 [inlined] #groebner_basis_coeffs#323 at ./none (unknown line) groebner_basis_coeffs at ./none (unknown line) unknown function (ip: 0x7916d66d2a9f) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 #generating_sets_fan#324 at ./none (unknown line) generating_sets_fan at ./none (unknown line) unknown function (ip: 0x7916d66a7a60) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 #simplified_generating_set#326 at ./none (unknown line) simplified_generating_set at ./none (unknown line) unknown function (ip: 0x7916d6ba0561) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 #initial_identifiable_functions#333 at ./none (unknown line) initial_identifiable_functions at ./none (unknown line) [inlined] #check_identifiability#349 at ./none (unknown line) check_identifiability at ./none (unknown line) [inlined] #assess_global_identifiability#364 at ./none (unknown line) assess_global_identifiability at ./none (unknown line) [inlined] macro expansion at ./timing.jl:461 [inlined] #_assess_identifiability#538 at /home/pkgeval/.julia/packages/StructuralIdentifiability/tZdGp/src/StructuralIdentifiability.jl:168 _assess_identifiability at /home/pkgeval/.julia/packages/StructuralIdentifiability/tZdGp/src/StructuralIdentifiability.jl:134 [inlined] #534 at /home/pkgeval/.julia/packages/StructuralIdentifiability/tZdGp/src/StructuralIdentifiability.jl:115 with_logstate at ./logging/logging.jl:534 with_logger at ./logging/logging.jl:644 [inlined] #assess_identifiability#531 at /home/pkgeval/.julia/packages/StructuralIdentifiability/tZdGp/src/StructuralIdentifiability.jl:113 [inlined] assess_identifiability at /home/pkgeval/.julia/packages/StructuralIdentifiability/tZdGp/src/StructuralIdentifiability.jl:104 unknown function (ip: 0x7916d6b8b1c6) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2290 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_body at /source/src/interpreter.c:580 eval_body at /source/src/interpreter.c:557 eval_body at /source/src/interpreter.c:557 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897 jl_toplevel_eval_flex at /source/src/toplevel.c:1032 jl_toplevel_eval_flex at /source/src/toplevel.c:972 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 wait at ./process.jl:687 eval at ./boot.jl:488 jfptr_wait_79915.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 subprocess_handler at /source/usr/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2404 unknown function (ip: 0x7aa60f28e463) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 #203 at /source/usr/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2344 withenv at ./env.jl:265 #188 at /source/usr/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2165 with_temp_env at /source/usr/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2023 #184 at /source/usr/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2132 #mktempdir#21 at ./file.jl:899 unknown function (ip: 0x7aa60f28395c) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 include_string at ./loading.jl:2855 _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 mktempdir at ./file.jl:895 _include at ./loading.jl:2915 mktempdir at ./file.jl:895 #sandbox#180 at /source/usr/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2079 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2071 unknown function (ip: 0x7aa60f27a3b9) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 #test#191 at /source/usr/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2329 test at /source/usr/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2241 [inlined] #test#170 at /source/usr/share/julia/stdlib/v1.13/Pkg/src/API.jl:486 test at /source/usr/share/julia/stdlib/v1.13/Pkg/src/API.jl:465 unknown function (ip: 0x7aa60f27a021) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 #test#84 at /source/usr/share/julia/stdlib/v1.13/Pkg/src/API.jl:164 unknown function (ip: 0x7aa60f26fc98) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 test at /source/usr/share/julia/stdlib/v1.13/Pkg/src/API.jl:153 #test#82 at /source/usr/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 test at /source/usr/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.13/Pkg/src/API.jl:151 [inlined] test at /source/usr/share/julia/stdlib/v1.13/Pkg/src/API.jl:151 unknown function (ip: 0x7aa60f26f18f) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2290 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:692 eval_body at /source/src/interpreter.c:557 eval_body at /source/src/interpreter.c:557 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897 jl_toplevel_eval_flex at /source/src/toplevel.c:1032 jl_toplevel_eval_flex at /source/src/toplevel.c:972 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 include at ./Base.jl:307 eval at ./boot.jl:488 IncludeInto at ./Base.jl:308 include_string at ./loading.jl:2855 _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jfptr_IncludeInto_117145.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 macro expansion at /home/pkgeval/.julia/packages/StructuralIdentifiability/tZdGp/test/runtests.jl:151 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:1771 [inlined] macro expansion at /home/pkgeval/.julia/packages/StructuralIdentifiability/tZdGp/test/runtests.jl:150 [inlined] macro expansion at ./timing.jl:621 [inlined] top-level scope at /home/pkgeval/.julia/packages/StructuralIdentifiability/tZdGp/test/runtests.jl:353 _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_invoke at /source/src/gf.c:3482 jl_toplevel_eval_flex at /source/src/toplevel.c:1021 jl_toplevel_eval_flex at /source/src/toplevel.c:972 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 _include at ./loading.jl:2915 eval at ./boot.jl:488 include at ./Base.jl:306 include_string at ./loading.jl:2855 _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 exec_options at ./client.jl:328 _include at ./loading.jl:2915 _start at ./client.jl:560 include at ./Base.jl:307 jfptr__start_63965.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2290 [inlined] true_main at /source/src/jlapi.c:964 jl_repl_entrypoint at /source/src/jlapi.c:1124 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7aa618bd6249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 21462738 (Pool: 21462195; Big: 543); GC: 21 IncludeInto at ./Base.jl:308 jfptr_IncludeInto_117145.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2290 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:692 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897 jl_toplevel_eval_flex at /source/src/toplevel.c:1032 jl_toplevel_eval_flex at /source/src/toplevel.c:972 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 eval at ./boot.jl:488 exec_options at ./client.jl:294 _start at ./client.jl:560 jfptr__start_63965.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2290 [inlined] true_main at /source/src/jlapi.c:964 jl_repl_entrypoint at /source/src/jlapi.c:1124 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7917081e3249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 299131501 (Pool: 299127714; Big: 3787); GC: 98 PkgEval terminated after 2725.09s: test duration exceeded the time limit