Package evaluation of Roentgen on Julia 1.13.0-DEV.140 (fac1ce7906*) started at 2025-03-02T17:25:46.938 ################################################################################ # Set-up # Set-up completed after 0.26s ################################################################################ # Installation # Installing Roentgen... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [b0d14063] + Roentgen v0.13.7 Updating `~/.julia/environments/v1.13/Manifest.toml` [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 ⌅ [79e6a3ab] + Adapt v3.7.2 [66dad0bd] + AliasTables v1.1.3 ⌃ [4fba245c] + ArrayInterface v7.7.1 ⌃ [13072b0f] + AxisAlgorithms v1.0.1 [39de3d68] + AxisArrays v0.4.7 [0e736298] + Bessels v0.2.8 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] + CPUSummary v0.2.6 [d360d2e6] + ChainRulesCore v1.25.1 [7a955b69] + CircularArrays v1.4.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 [944b1d66] + CodecZlib v0.7.8 [3da002f7] + ColorTypes v0.12.0 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.0 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.5.8 [150eb455] + CoordinateTransformations v0.6.4 [adafc99b] + CpuId v0.3.1 ⌅ [a26e6606] + DICOM v0.10.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.20 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.3 [411431e0] + Extents v0.1.5 [5789e2e9] + FileIO v1.17.0 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [53c48c17] + FixedPointNumbers v0.8.5 [f6369f11] + ForwardDiff v0.10.38 [68eda718] + GeoFormatTypes v0.4.4 [cf35fbd7] + GeoInterface v1.4.1 ⌅ [5c1252a2] + GeometryBasics v0.4.11 [c27321d9] + Glob v1.3.1 [615f187c] + IfElse v0.1.1 [2803e5a7] + ImageAxes v0.6.12 [c817782e] + ImageBase v0.1.7 [a09fc81d] + ImageCore v0.10.5 ⌅ [a98d9a8b] + Interpolations v0.14.7 [8197267c] + IntervalSets v0.7.10 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] + JLD2 v0.4.54 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [10f19ff3] + LayoutPointers v0.1.17 [9c8b4983] + LightXML v0.9.1 [d3d80556] + LineSearches v7.3.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.15 [d125e4d3] + ManualMemory v0.1.8 [dbb5928d] + MappedArrays v0.4.2 ⌅ [7269a6da] + MeshIO v0.4.13 ⌅ [eacbb407] + Meshes v0.35.21 [e1d29d7a] + Missings v1.2.0 [e94cdb99] + MosaicViews v0.3.4 [d41bc354] + NLSolversBase v7.8.3 [9bb6cfbd] + NRRD v0.6.5 [77ba4419] + NaNMath v1.1.2 [b8a86587] + NearestNeighbors v0.4.21 [6fe1bfb0] + OffsetArrays v1.15.0 [429524aa] + Optim v1.11.0 [bac558e1] + OrderedCollections v1.8.0 [5432bcbf] + PaddedViews v0.5.12 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.1 [f517fe37] + Polyester v0.7.16 [1d0040c9] + PolyesterWeave v0.2.2 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [92933f4c] + ProgressMeter v1.10.2 [43287f4e] + PtrArrays v1.3.0 [94ee1d12] + Quaternions v0.7.6 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [c1ae055f] + RealDot v0.1.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [b0d14063] + Roentgen v0.13.7 [f2b01f46] + Roots v2.2.6 [6038ab10] + Rotations v1.7.1 [94e857df] + SIMDTypes v0.1.0 [efcf1570] + Setfield v1.1.2 [699a6c99] + SimpleTraits v0.9.4 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [cae243ae] + StackViews v0.1.1 [aedffcd0] + Static v1.1.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [7792a7ef] + StrideArraysCore v0.5.7 ⌅ [09ab397b] + StructArrays v0.6.18 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [62fd8b95] + TensorCore v0.1.1 [8290d209] + ThreadingUtilities v0.5.2 [3bb67fe8] + TranscodingStreams v0.11.3 [28dd2a49] + TransformsBase v1.6.0 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.22.0 [4004b06d] + VTKBase v1.0.1 ⌅ [efce3f68] + WoodburyMatrices v0.5.6 [64499a7a] + WriteVTK v1.21.1 [5ae413db] + EarCut_jll v2.2.4+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [02c8fc9c] + XML2_jll v2.13.6+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 6.56s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 5586.9 ms ✓ NLSolversBase 10654.1 ms ✓ MeshIO 7840.8 ms ✓ LineSearches 37238.9 ms ✓ Optim ✗ Roentgen 4 dependencies successfully precompiled in 213 seconds. 200 already precompiled. ERROR: LoadError: The following 1 direct dependency failed to precompile: Roentgen Failed to precompile Roentgen [b0d14063-c48a-4081-83d5-5a5ab48cb495] to "/home/pkgeval/.julia/compiled/v1.13/Roentgen/jl_AwsdY8" (ProcessExited(1)). ERROR: LoadError: ArgumentError: invalid type for argument i in method definition for setindex at /home/pkgeval/.julia/packages/Roentgen/DUYwn/src/BeamLimitingDevices/MultiLeafCollimatorSequence.jl:64 Stacktrace: [1] top-level scope @ ~/.julia/packages/Roentgen/DUYwn/src/BeamLimitingDevices/MultiLeafCollimatorSequence.jl:64 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [3] top-level scope @ ~/.julia/packages/Roentgen/DUYwn/src/BeamLimitingDevices/BeamLimitingDevices.jl:14 [4] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [5] top-level scope @ ~/.julia/packages/Roentgen/DUYwn/src/Roentgen.jl:42 [6] include(mod::Module, _path::String) @ Base ./Base.jl:306 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3004 [8] top-level scope @ stdin:6 [9] eval(m::Module, e::Any) @ Core ./boot.jl:488 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2855 [11] include_string @ ./loading.jl:2865 [inlined] [12] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [13] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/Roentgen/DUYwn/src/BeamLimitingDevices/MultiLeafCollimatorSequence.jl:64 in expression starting at /home/pkgeval/.julia/packages/Roentgen/DUYwn/src/BeamLimitingDevices/BeamLimitingDevices.jl:14 in expression starting at /home/pkgeval/.julia/packages/Roentgen/DUYwn/src/Roentgen.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 220.72s ################################################################################ # Loading # Loading Roentgen... Precompiling packages... Info Given Roentgen was explicitly requested, output will be shown live  ERROR: LoadError: ArgumentError: invalid type for argument i in method definition for setindex at /home/pkgeval/.julia/packages/Roentgen/DUYwn/src/BeamLimitingDevices/MultiLeafCollimatorSequence.jl:64 Stacktrace:  [1] top-level scope  @ ~/.julia/packages/Roentgen/DUYwn/src/BeamLimitingDevices/MultiLeafCollimatorSequence.jl:64  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:307  [3] top-level scope  @ ~/.julia/packages/Roentgen/DUYwn/src/BeamLimitingDevices/BeamLimitingDevices.jl:14  [4] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:307  [5] top-level scope  @ ~/.julia/packages/Roentgen/DUYwn/src/Roentgen.jl:42  [6] include(mod::Module, _path::String)  @ Base ./Base.jl:306  [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3004  [8] top-level scope  @ stdin:6  [9] eval(m::Module, e::Any)  @ Core ./boot.jl:488  [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2855  [11] include_string  @ ./loading.jl:2865 [inlined]  [12] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:326  [13] _start()  @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/Roentgen/DUYwn/src/BeamLimitingDevices/MultiLeafCollimatorSequence.jl:64 in expression starting at /home/pkgeval/.julia/packages/Roentgen/DUYwn/src/BeamLimitingDevices/BeamLimitingDevices.jl:14 in expression starting at /home/pkgeval/.julia/packages/Roentgen/DUYwn/src/Roentgen.jl:1 in expression starting at stdin:6 ✗ Roentgen 0 dependencies successfully precompiled in 29 seconds. 204 already precompiled. ERROR: The following 1 direct dependency failed to precompile: Roentgen Failed to precompile Roentgen [b0d14063-c48a-4081-83d5-5a5ab48cb495] to "/home/pkgeval/.julia/compiled/v1.13/Roentgen/jl_X7O752" (ProcessExited(1)). ERROR: LoadError: ArgumentError: invalid type for argument i in method definition for setindex at /home/pkgeval/.julia/packages/Roentgen/DUYwn/src/BeamLimitingDevices/MultiLeafCollimatorSequence.jl:64 Stacktrace: [1] top-level scope @ ~/.julia/packages/Roentgen/DUYwn/src/BeamLimitingDevices/MultiLeafCollimatorSequence.jl:64 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [3] top-level scope @ ~/.julia/packages/Roentgen/DUYwn/src/BeamLimitingDevices/BeamLimitingDevices.jl:14 [4] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [5] top-level scope @ ~/.julia/packages/Roentgen/DUYwn/src/Roentgen.jl:42 [6] include(mod::Module, _path::String) @ Base ./Base.jl:306 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3004 [8] top-level scope @ stdin:6 [9] eval(m::Module, e::Any) @ Core ./boot.jl:488 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2855 [11] include_string @ ./loading.jl:2865 [inlined] [12] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [13] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/Roentgen/DUYwn/src/BeamLimitingDevices/MultiLeafCollimatorSequence.jl:64 in expression starting at /home/pkgeval/.julia/packages/Roentgen/DUYwn/src/BeamLimitingDevices/BeamLimitingDevices.jl:14 in expression starting at /home/pkgeval/.julia/packages/Roentgen/DUYwn/src/Roentgen.jl:1 in expression starting at stdin: Loading failed after 30.4s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using Roentgen'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:598 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:513 [3] run(::Cmd) @ Base ./process.jl:510 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:306 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [7] _start() @ Base ./client.jl:560 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 282.8s: package fails to precompile