Package evaluation of NamedTrajectories on Julia 1.13.0-DEV.140 (fac1ce7906*) started at 2025-03-02T09:10:03.339 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 7.8s ################################################################################ # Installation # Installing NamedTrajectories... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [538bc3a1] + NamedTrajectories v0.3.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [5789e2e9] + FileIO v1.17.0 [033835bb] + JLD2 v0.5.11 [1914dd2f] + MacroTools v0.5.15 [538bc3a1] + NamedTrajectories v0.3.1 [bac558e1] + OrderedCollections v1.8.0 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [f8b46487] + TestItemRunner v1.1.0 [1c621080] + TestItems v1.0.0 [3bb67fe8] + TranscodingStreams v0.11.3 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [458c3c95] + OpenSSL_jll v3.0.16+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Installation completed after 3.3s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 919.3s ################################################################################ # Testing # Testing NamedTrajectories Status `/tmp/jl_FN6V37/Project.toml` [13f3f980] CairoMakie v0.13.2 [033835bb] JLD2 v0.5.11 [538bc3a1] NamedTrajectories v0.3.1 [bac558e1] OrderedCollections v1.8.0 [189a3867] Reexport v1.2.2 [f8b46487] TestItemRunner v1.1.0 [1c621080] TestItems v1.0.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_FN6V37/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.2.0 [35492f91] AdaptivePredicates v1.2.0 [66dad0bd] AliasTables v1.1.3 [27a7e980] Animations v0.4.2 [67c07d97] Automa v1.1.0 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.7 [fa961155] CEnum v0.5.0 [159f3aea] Cairo v1.1.1 [13f3f980] CairoMakie v0.13.2 [d360d2e6] ChainRulesCore v1.25.1 [a2cac450] ColorBrewer v0.4.1 [35d6a980] ColorSchemes v3.29.0 [3da002f7] ColorTypes v0.12.0 [c3611d14] ColorVectorSpace 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[1082639a] Xorg_libXext_jll v1.3.6+3 [ea2f1a96] Xorg_libXrender_jll v0.9.11+1 [14d82f49] Xorg_libpthread_stubs_jll v0.1.2+0 [c7cfdc94] Xorg_libxcb_jll v1.17.0+3 [c5fb5394] Xorg_xtrans_jll v1.5.1+0 [3161d3a3] Zstd_jll v1.5.7+1 [9a68df92] isoband_jll v0.2.3+0 [a4ae2306] libaom_jll v3.11.0+0 [0ac62f75] libass_jll v0.15.2+0 [f638f0a6] libfdk_aac_jll v2.0.3+0 [b53b4c65] libpng_jll v1.6.46+0 [075b6546] libsixel_jll v1.10.5+0 [f27f6e37] libvorbis_jll v1.3.7+2 [c5f90fcd] libwebp_jll v1.5.0+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [1270edf5] x264_jll v10164.0.1+0 ⌅ [dfaa095f] x265_jll v3.6.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [8bf52ea8] CRC32c v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.11.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2024.12.31 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.0.16+0 [efcefdf7] PCRE2_jll v10.44.0+1 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... 4987.6 ms ✓ Imath_jll 1294.9 ms ✓ Giflib_jll 1291.8 ms ✓ LERC_jll 1349.7 ms ✓ JpegTurbo_jll 1348.5 ms ✓ XZ_jll 1334.7 ms ✓ oneTBB_jll 1289.8 ms ✓ Libgpg_error_jll 124553.1 ms ✓ TiffImages 7134.6 ms ✓ IntelOpenMP_jll 8323.9 ms ✓ ImageAxes 4644.9 ms ✓ Distributions → DistributionsTestExt 1544.2 ms ✓ OpenEXR_jll 1527.7 ms ✓ libsixel_jll 13080.7 ms ✓ JpegTurbo 1578.9 ms ✓ Libtiff_jll 1518.4 ms ✓ Libgcrypt_jll 7347.1 ms ✓ MKL_jll 7584.2 ms ✓ ImageMetadata 8137.3 ms ✓ OpenEXR 13547.8 ms ✓ Sixel 1555.4 ms ✓ XSLT_jll 12168.7 ms ✓ Netpbm 1553.6 ms ✓ Libglvnd_jll 1694.9 ms ✓ Pango_jll 1760.9 ms ✓ libwebp_jll 2913.2 ms ✓ Cairo 12148.1 ms ✓ WebP 239312.9 ms ✓ CairoMakie 28 dependencies successfully precompiled in 489 seconds. 244 already precompiled. ┌ Error: Exception while generating log record in module Main.var"##302" at /home/pkgeval/.julia/packages/NamedTrajectories/XvQDL/src/methods_named_trajectory.jl:1114 │ exception = │ Key collision detected: [:x] │ Stacktrace: │ [1] error(::String, ::Vector{Symbol}) │ @ Base ./error.jl:54 │ [2] merge_outer(nt1::@NamedTuple{x::Matrix{Float64}, x1::Matrix{Float64}}, nt2::@NamedTuple{x::Matrix{Float64}, x2::Matrix{Float64}}) │ @ NamedTrajectories.MethodsNamedTrajectory ~/.julia/packages/NamedTrajectories/XvQDL/src/methods_named_trajectory.jl:807 │ [3] _mapreduce(f::typeof(identity), op::typeof(NamedTrajectories.MethodsNamedTrajectory.merge_outer), ::IndexLinear, A::Vector{NamedTuple{names, Tuple{Matrix{Float64}, Matrix{Float64}}} where names}) │ @ Base ./reduce.jl:429 │ [4] _mapreduce_dim │ @ ./reducedim.jl:334 [inlined] │ [5] mapreduce │ @ ./reducedim.jl:326 [inlined] │ [6] reduce │ @ ./reducedim.jl:375 [inlined] │ [7] merge_outer(objs::Vector{NamedTuple{names, Tuple{Matrix{Float64}, Matrix{Float64}}} where names}) │ @ NamedTrajectories.MethodsNamedTrajectory ~/.julia/packages/NamedTrajectories/XvQDL/src/methods_named_trajectory.jl:783 │ [8] merge(trajs::Vector{NamedTrajectories.StructNamedTrajectory.NamedTrajectory{Float64}}; free_time::Bool, merge_names::@NamedTuple{}, timestep_name::Symbol, timestep_index::Int64) │ @ NamedTrajectories.MethodsNamedTrajectory ~/.julia/packages/NamedTrajectories/XvQDL/src/methods_named_trajectory.jl:688 │ [9] merge │ @ ~/.julia/packages/NamedTrajectories/XvQDL/src/methods_named_trajectory.jl:655 [inlined] │ [10] #merge#77 │ @ ~/.julia/packages/NamedTrajectories/XvQDL/src/methods_named_trajectory.jl:652 [inlined] │ [11] merge(traj1::NamedTrajectories.StructNamedTrajectory.NamedTrajectory{Float64}, traj2::NamedTrajectories.StructNamedTrajectory.NamedTrajectory{Float64}) │ @ NamedTrajectories.MethodsNamedTrajectory ~/.julia/packages/NamedTrajectories/XvQDL/src/methods_named_trajectory.jl:651 │ [12] top-level scope │ @ ~/.julia/packages/NamedTrajectories/XvQDL/src/methods_named_trajectory.jl:393 │ [13] macro expansion │ @ logging/logging.jl:383 [inlined] │ [14] eval(m::Module, e::Any) │ @ Core ./boot.jl:488 │ [15] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:2855 │ [16] include_string(m::Module, txt::String, fname::String) │ @ Base ./loading.jl:2865 │ [17] #invokelatest#1 │ @ ./essentials.jl:1090 [inlined] │ [18] invokelatest │ @ ./essentials.jl:1086 [inlined] │ [19] #run_testitem##6 │ @ ~/.julia/packages/TestItemRunner/Q6zqe/src/TestItemRunner.jl:118 [inlined] │ [20] withpath(f::TestItemRunner.var"#run_testitem##6#run_testitem##7"{String, String, Module}, path::String) │ @ TestItemRunner ~/.julia/packages/TestItemRunner/Q6zqe/src/vendored_code.jl:7 │ [21] #run_testitem##4 │ @ ~/.julia/packages/TestItemRunner/Q6zqe/src/TestItemRunner.jl:117 [inlined] │ [22] cd(f::TestItemRunner.var"#run_testitem##4#run_testitem##5"{String, String, Module}, dir::String) │ @ Base.Filesystem ./file.jl:112 │ [23] run_testitem(filepath::String, use_default_usings::Bool, setups::Vector{Symbol}, package_name::String, original_code::String, line::Int64, column::Int64, test_setup_module_set::TestItemRunner.TestSetupModuleSet, testsetups::Dict{Symbol, Any}) │ @ TestItemRunner ~/.julia/packages/TestItemRunner/Q6zqe/src/TestItemRunner.jl:116 │ [24] run_tests(path::String; filter::Nothing, verbose::Bool) │ @ TestItemRunner ~/.julia/packages/TestItemRunner/Q6zqe/src/TestItemRunner.jl:221 │ [25] run_tests(path::String) │ @ TestItemRunner ~/.julia/packages/TestItemRunner/Q6zqe/src/TestItemRunner.jl:133 │ [26] top-level scope │ @ ~/.julia/packages/NamedTrajectories/XvQDL/test/runtests.jl:5 │ [27] include(mapexpr::Function, mod::Module, _path::String) │ @ Base ./Base.jl:307 │ [28] top-level scope │ @ none:6 │ [29] eval(m::Module, e::Any) │ @ Core ./boot.jl:488 │ [30] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:294 │ [31] _start() │ @ Base ./client.jl:560 └ @ Main.var"##302" ~/.julia/packages/NamedTrajectories/XvQDL/src/methods_named_trajectory.jl:1114 ┌ Warning: Automatically merging trajectories with different timesteps. │ To avoid this warning, specify the timestep index in merge_names. └ @ NamedTrajectories.MethodsNamedTrajectory ~/.julia/packages/NamedTrajectories/XvQDL/src/methods_named_trajectory.jl:712 ┌ Error: Exception while generating log record in module Main.var"##310" at /home/pkgeval/.julia/packages/NamedTrajectories/XvQDL/src/methods_named_trajectory.jl:1248 │ exception = │ Suffix '_new' not found at the end of 'a' │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] remove_suffix │ @ ~/.julia/packages/NamedTrajectories/XvQDL/src/methods_named_trajectory.jl:527 [inlined] │ [3] remove_suffix(symb::Symbol, suffix::String) │ @ NamedTrajectories.MethodsNamedTrajectory ~/.julia/packages/NamedTrajectories/XvQDL/src/methods_named_trajectory.jl:531 │ [4] top-level scope │ @ ~/.julia/packages/NamedTrajectories/XvQDL/src/methods_named_trajectory.jl:393 │ [5] macro expansion │ @ logging/logging.jl:383 [inlined] │ [6] eval(m::Module, e::Any) │ @ Core ./boot.jl:488 │ [7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:2855 │ [8] include_string(m::Module, txt::String, fname::String) │ @ Base ./loading.jl:2865 │ [9] #invokelatest#1 │ @ ./essentials.jl:1090 [inlined] │ [10] invokelatest │ @ ./essentials.jl:1086 [inlined] │ [11] #run_testitem##6 │ @ ~/.julia/packages/TestItemRunner/Q6zqe/src/TestItemRunner.jl:118 [inlined] │ [12] withpath(f::TestItemRunner.var"#run_testitem##6#run_testitem##7"{String, String, Module}, path::String) │ @ TestItemRunner ~/.julia/packages/TestItemRunner/Q6zqe/src/vendored_code.jl:7 │ [13] #run_testitem##4 │ @ ~/.julia/packages/TestItemRunner/Q6zqe/src/TestItemRunner.jl:117 [inlined] │ [14] cd(f::TestItemRunner.var"#run_testitem##4#run_testitem##5"{String, String, Module}, dir::String) │ @ Base.Filesystem ./file.jl:112 │ [15] run_testitem(filepath::String, use_default_usings::Bool, setups::Vector{Symbol}, package_name::String, original_code::String, line::Int64, column::Int64, test_setup_module_set::TestItemRunner.TestSetupModuleSet, testsetups::Dict{Symbol, Any}) │ @ TestItemRunner ~/.julia/packages/TestItemRunner/Q6zqe/src/TestItemRunner.jl:116 │ [16] run_tests(path::String; filter::Nothing, verbose::Bool) │ @ TestItemRunner ~/.julia/packages/TestItemRunner/Q6zqe/src/TestItemRunner.jl:221 │ [17] run_tests(path::String) │ @ TestItemRunner ~/.julia/packages/TestItemRunner/Q6zqe/src/TestItemRunner.jl:133 │ [18] top-level scope │ @ ~/.julia/packages/NamedTrajectories/XvQDL/test/runtests.jl:5 │ [19] include(mapexpr::Function, mod::Module, _path::String) │ @ Base ./Base.jl:307 │ [20] top-level scope │ @ none:6 │ [21] eval(m::Module, e::Any) │ @ Core ./boot.jl:488 │ [22] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:294 │ [23] _start() │ @ Base ./client.jl:560 └ @ Main.var"##310" ~/.julia/packages/NamedTrajectories/XvQDL/src/methods_named_trajectory.jl:1248 Test Summary: | Pass Total Time Package | 171 171 14m06.1s Testing NamedTrajectories tests passed Testing completed after 900.97s PkgEval succeeded after 1846.9s