Package evaluation of Express on Julia 1.13.0-DEV.140 (fac1ce7906*) started at 2025-03-02T15:26:41.229 ################################################################################ # Set-up # Set-up completed after 0.22s ################################################################################ # Installation # Installing Express... Resolving package versions... Installed IrrationalConstants ───────── v0.2.4 Installed Crayons ───────────────────── v4.1.1 Installed Rmath ─────────────────────── v0.8.0 Installed DiffRules ─────────────────── v1.15.1 Installed ArnoldiMethod ─────────────── v0.4.0 Installed HypergeometricFunctions ───── v0.3.27 Installed JLD2 ──────────────────────── v0.4.54 Installed Conda ─────────────────────── v1.10.2 Installed StatsFuns ─────────────────── v1.3.2 Installed PrettyTables ──────────────── v2.4.0 Installed JSON ──────────────────────── v0.21.4 Installed PtrArrays ─────────────────── v1.3.0 Installed TableTraits ───────────────── v1.0.1 Installed Preferences ───────────────── v1.4.3 Installed DiffResults ───────────────── v1.1.0 Installed IsURL ─────────────────────── v0.2.0 Installed Inflate ───────────────────── v0.1.5 Installed SentinelArrays ────────────── v1.4.8 Installed Tables ────────────────────── v1.12.0 Installed Parsers ───────────────────── v2.8.1 Installed Unitful ───────────────────── v1.22.0 Installed PyCall ────────────────────── v1.96.4 Installed SpecialFunctions ──────────── v2.5.0 Installed PDMats ────────────────────── v0.11.32 Installed DataAPI ───────────────────── v1.16.0 Installed PooledArrays ──────────────── v1.4.3 Installed PolynomialRoots ───────────── v1.0.0 Installed InlineStrings ─────────────── v1.4.3 Installed StaticArrays ──────────────── v1.9.13 Installed ExproniconLite ────────────── v0.10.14 Installed RecipesBase ───────────────── v1.3.4 Installed StringEncodings ───────────── v0.3.7 Installed Setfield ──────────────────── v0.8.2 Installed JLLWrappers ───────────────── v1.7.0 Installed StaticArraysCore ──────────── v1.4.3 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed NaNMath ───────────────────── v1.1.2 Installed Formatting ────────────────── v0.4.3 Installed ConstructionBase ──────────── v1.5.8 Installed ArrayInterfaceCore ────────── v0.1.29 Installed Roots ─────────────────────── v1.4.1 Installed DataValueInterfaces ───────── v1.0.0 Installed StructHelpers ─────────────── v0.1.5 Installed PrecompileTools ───────────── v1.2.1 Installed OrderedCollections ────────── v1.8.0 Installed VersionParsing ────────────── v1.3.0 Installed AbInitioSoftwareBase ──────── v0.6.5 Installed LaTeXStrings ──────────────── v1.4.0 Installed TranscodingStreams ────────── v0.11.3 Installed PyQHA ─────────────────────── v0.1.1 Installed Pseudopotentials ──────────── v0.8.1 Installed SnoopPrecompile ───────────── v1.0.3 Installed OptimBase ─────────────────── v2.0.2 Installed InvertedIndices ───────────── v1.3.1 Installed NLSolversBase ─────────────── v7.8.3 Installed EquationsOfStateOfSolids ──── v0.4.2 Installed ForwardDiff ───────────────── v0.10.38 Installed FileIO ────────────────────── v1.17.0 Installed FillArrays ────────────────── v1.13.0 Installed Reexport ──────────────────── v1.2.2 Installed QuadGK ────────────────────── v2.11.2 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed Graphs ────────────────────── v1.12.0 Installed DataFrames ────────────────── v1.7.0 Installed Statistics ────────────────── v1.11.1 Installed CommonSubexpressions ──────── v0.3.1 Installed Requires ──────────────────── v1.3.1 Installed LogExpFunctions ───────────── v0.3.29 Installed Polynomials ───────────────── v3.2.13 Installed SimpleWorkflows ───────────── v0.16.2 Installed DataStructures ────────────── v0.18.20 Installed StatsAPI ──────────────────── v1.7.0 Installed AliasTables ───────────────── v1.1.3 Installed EquationsOfState ──────────── v4.0.0 Installed MacroTools ────────────────── v0.5.15 Installed Compat ────────────────────── v4.16.0 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed UnPack ────────────────────── v1.0.2 Installed CommonSolve ───────────────── v0.2.4 Installed Configurations ────────────── v0.17.6 Installed LsqFit ────────────────────── v0.12.1 Installed Distributions ─────────────── v0.25.117 Installed TryCatch ──────────────────── v0.1.1 Installed StringManipulation ────────── v0.4.1 Installed SimpleTraits ──────────────── v0.9.4 Installed Missings ──────────────────── v1.2.0 Installed DocStringExtensions ───────── v0.9.3 Installed SortingAlgorithms ─────────── v1.2.1 Installed YAML ──────────────────────── v0.4.13 Installed StatsBase ─────────────────── v0.33.21 Installed FiniteDiff ────────────────── v2.17.0 Installed Express ───────────────────── v0.9.2 Installing 3 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact Libiconv 1.9 MiB Updating `~/.julia/environments/v1.13/Project.toml` [b12df14e] + Express v0.9.2 Updating `~/.julia/environments/v1.13/Manifest.toml` ⌅ [df5135bc] + AbInitioSoftwareBase v0.6.5 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [30b0a656] + ArrayInterfaceCore v0.1.29 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [8f4d0f93] + Conda v1.10.2 [5218b696] + Configurations v0.17.6 [187b0558] + ConstructionBase v1.5.8 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.20 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [31c24e10] + Distributions v0.25.117 [ffbed154] + DocStringExtensions v0.9.3 [0438fec6] + EquationsOfState v4.0.0 [1eaa2786] + EquationsOfStateOfSolids v0.4.2 [b12df14e] + Express v0.9.2 [55351af7] + ExproniconLite v0.10.14 [5789e2e9] + FileIO v1.17.0 [1a297f60] + FillArrays v1.13.0 ⌃ [6a86dc24] + FiniteDiff v2.17.0 [59287772] + Formatting v0.4.3 [f6369f11] + ForwardDiff v0.10.38 [86223c79] + Graphs v1.12.0 [34004b35] + HypergeometricFunctions v0.3.27 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.3 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [ceb4388c] + IsURL v0.2.0 [82899510] + IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] + JLD2 v0.4.54 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 ⌅ [2fda8390] + LsqFit v0.12.1 [1914dd2f] + MacroTools v0.5.15 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.8.3 [77ba4419] + NaNMath v1.1.2 [87e2bd06] + OptimBase v2.0.2 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.32 [69de0a69] + Parsers v2.8.1 [3a141323] + PolynomialRoots v1.0.0 ⌅ [f27b6e38] + Polynomials v3.2.13 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [1b2dc2e6] + Pseudopotentials v0.8.1 [43287f4e] + PtrArrays v1.3.0 [438e738f] + PyCall v1.96.4 [5a1273f0] + PyQHA v0.1.1 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 ⌅ [f2b01f46] + Roots v1.4.1 [91c51154] + SentinelArrays v1.4.8 ⌅ [efcf1570] + Setfield v0.8.2 [699a6c99] + SimpleTraits v0.9.4 ⌅ [6a97d125] + SimpleWorkflows v0.16.2 [66db9d55] + SnoopPrecompile v1.0.3 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 ⌅ [2913bbd2] + StatsBase v0.33.21 [4c63d2b9] + StatsFuns v1.3.2 [69024149] + StringEncodings v0.3.7 [892a3eda] + StringManipulation v0.4.1 ⌅ [4093c41a] + StructHelpers v0.1.5 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [3bb67fe8] + TranscodingStreams v0.11.3 [0ca489f0] + TryCatch v0.1.1 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.22.0 [81def892] + VersionParsing v1.3.0 [ddb6d928] + YAML v0.4.13 [94ce4f54] + Libiconv_jll v1.18.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log` Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Installation completed after 135.11s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 890.2 ms ✓ LaTeXStrings 716.8 ms ✓ EquationsOfState 720.7 ms ✓ IteratorInterfaceExtensions 892.7 ms ✓ StatsAPI 855.9 ms ✓ TryCatch 844.1 ms ✓ VersionParsing 4553.9 ms ✓ ExproniconLite 750.4 ms ✓ UnPack 4276.0 ms ✓ FillArrays 1144.3 ms ✓ Statistics 743.7 ms ✓ CommonSolve 4203.2 ms ✓ MacroTools 1146.1 ms ✓ OrderedCollections 1036.4 ms ✓ Requires 1423.5 ms ✓ DataValueInterfaces 999.5 ms ✓ Reexport 1376.5 ms ✓ InlineStrings 2074.8 ms ✓ IrrationalConstants 786.2 ms ✓ IsURL 777.2 ms ✓ PtrArrays 1295.8 ms ✓ TranscodingStreams 1021.3 ms ✓ NaNMath 791.0 ms ✓ Pseudopotentials 817.1 ms ✓ InvertedIndices 970.8 ms ✓ Inflate 931.6 ms ✓ ConstructionBase 834.4 ms ✓ DataAPI 1906.9 ms ✓ Crayons 870.5 ms ✓ PolynomialRoots 925.9 ms ✓ StaticArraysCore 1263.1 ms ✓ SuiteSparse 1176.9 ms ✓ Formatting 4183.3 ms ✓ SentinelArrays 34839.3 ms ✓ Unitful 1176.3 ms ✓ Preferences 1080.5 ms ✓ Compat 1274.0 ms ✓ DocStringExtensions 848.3 ms ✓ TableTraits 4905.3 ms ✓ FillArrays → FillArraysSparseArraysExt 1294.7 ms ✓ Statistics → SparseArraysExt 1078.3 ms ✓ FillArrays → FillArraysStatisticsExt 1453.6 ms ✓ CommonSubexpressions 3871.5 ms ✓ SimpleTraits 5025.6 ms ✓ Configurations 11493.2 ms ✓ FileIO 1027.2 ms ✓ AliasTables 989.4 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 1000.4 ms ✓ PooledArrays 984.7 ms ✓ Missings 909.0 ms ✓ DiffResults 1665.1 ms ✓ PDMats 2585.8 ms ✓ Unitful → ConstructionBaseUnitfulExt 1101.0 ms ✓ SnoopPrecompile 1295.8 ms ✓ JLLWrappers 1122.6 ms ✓ PrecompileTools 1041.3 ms ✓ Compat → CompatLinearAlgebraExt 1319.8 ms ✓ LogExpFunctions 1960.0 ms ✓ Tables 2841.7 ms ✓ Setfield 1277.1 ms ✓ StructHelpers 1406.9 ms ✓ FillArrays → FillArraysPDMatsExt 2145.9 ms ✓ ArrayInterfaceCore 1254.7 ms ✓ Rmath_jll 1262.0 ms ✓ Libiconv_jll 1276.0 ms ✓ OpenSpecFun_jll 15819.5 ms ✓ StaticArrays 2807.9 ms ✓ RecipesBase 3196.6 ms ✓ StringManipulation 27849.6 ms ✓ Parsers 53589.4 ms ✓ JLD2 6514.9 ms ✓ DataStructures 5882.8 ms ✓ Roots 1824.1 ms ✓ Rmath 1279.0 ms ✓ StringEncodings 5209.1 ms ✓ SpecialFunctions 3878.3 ms ✓ ArnoldiMethod 1639.6 ms ✓ StaticArrays → StaticArraysStatisticsExt 1677.9 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 31842.5 ms ✓ Polynomials 29829.2 ms ✓ PrettyTables 4063.6 ms ✓ JSON 1514.0 ms ✓ InlineStrings → ParsersExt 2426.4 ms ✓ SortingAlgorithms 3787.5 ms ✓ QuadGK 2708.3 ms ✓ YAML 2500.5 ms ✓ HypergeometricFunctions 1477.8 ms ✓ DiffRules 13390.6 ms ✓ Graphs 2831.0 ms ✓ FiniteDiff 2407.0 ms ✓ Conda 9860.9 ms ✓ StatsBase 88567.2 ms ✓ DataFrames 4483.9 ms ✓ AbInitioSoftwareBase 3042.3 ms ✓ StatsFuns 10911.6 ms ✓ ForwardDiff 35494.3 ms ✓ PyCall 22403.6 ms ✓ SimpleWorkflows 18969.5 ms ✓ Distributions 4507.2 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 64467.2 ms ✓ PyQHA 5966.2 ms ✓ NLSolversBase 3439.9 ms ✓ OptimBase 8788.5 ms ✓ LsqFit 16150.7 ms ✓ EquationsOfStateOfSolids ✗ Express 104 dependencies successfully precompiled in 723 seconds. 35 already precompiled. 3 dependencies had output during precompilation: ┌ Formatting │ ┌ Warning: DEPRECATION NOTICE │ │ │ │ Formatting.jl has been unmaintained for a while, with some serious │ │ correctness bugs compromising the original purpose of the package. As a result, │ │ it has been deprecated - consider using an alternative, such as │ │ `Format.jl` (https://github.com/JuliaString/Format.jl) or the `Printf` stdlib directly. │ │ │ │ If you are not using Formatting.jl as a direct dependency, please consider │ │ opening an issue on any packages you are using that do use it as a dependency. │ │ From Julia 1.9 onwards, you can query `]why Formatting` to figure out which │ │ package originally brings it in as a dependency. │ └ @ Formatting ~/.julia/packages/Formatting/3VxOt/src/Formatting.jl:12 └ ┌ Polynomials │ WARNING: Constructor for type "Symbol" was extended in `Polynomials` without explicit qualification or import. │ NOTE: Assumed "Symbol" refers to `Base.Symbol`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Symbol end`. │ Hint: To silence the warning, qualify `Symbol` as `Base.Symbol` in the method signature or explicitly `import Base: Symbol`. └ ┌ PyQHA │ [ Info: Running `conda config --set pip_interop_enabled true --file /home/pkgeval/.julia/conda/3/x86_64/condarc-julia.yml` in root environment │ [ Info: Running `pip install git+https://github.com/MineralsCloud/qha.git@v1.0.20` in root environment │ Collecting git+https://github.com/MineralsCloud/qha.git@v1.0.20 │ Cloning https://github.com/MineralsCloud/qha.git (to revision v1.0.20) to /tmp/pip-req-build-35gcemdx │ Running command git clone --filter=blob:none --quiet https://github.com/MineralsCloud/qha.git /tmp/pip-req-build-35gcemdx │ Running command git checkout -q 4f02797c5cb659be6c030a8a4a4c19c5491d1132 │ Resolved https://github.com/MineralsCloud/qha.git to commit 4f02797c5cb659be6c030a8a4a4c19c5491d1132 │ Preparing metadata (setup.py): started │ Preparing metadata (setup.py): finished with status 'done' │ Collecting lazy_property (from qha==1.0.20) │ Downloading lazy_property-0.0.1-py2.py3-none-any.whl.metadata (273 bytes) │ Collecting numba (from qha==1.0.20) │ Downloading numba-0.61.0-cp312-cp312-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.8 kB) │ Collecting mpmath (from qha==1.0.20) │ Downloading mpmath-1.3.0-py3-none-any.whl.metadata (8.6 kB) │ Requirement already satisfied: numpy in ./.julia/conda/3/x86_64/lib/python3.12/site-packages (from qha==1.0.20) (2.2.3) │ Collecting pandas (from qha==1.0.20) │ Downloading pandas-2.2.3-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (89 kB) │ Collecting scientific-string (from qha==1.0.20) │ Downloading scientific_string-0.1.0-py3-none-any.whl.metadata (292 bytes) │ Collecting scipy (from qha==1.0.20) │ 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numba-0.61.0-cp312-cp312-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (3.9 MB) │ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 3.9/3.9 MB 114.9 MB/s eta 0:00:00 │ Downloading numpy-2.1.3-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (16.0 MB) │ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 16.0/16.0 MB 124.0 MB/s eta 0:00:00 │ Downloading pandas-2.2.3-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (12.7 MB) │ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 12.7/12.7 MB 139.5 MB/s eta 0:00:00 │ Downloading PyYAML-6.0.2-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (767 kB) │ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 767.5/767.5 kB 56.8 MB/s eta 0:00:00 │ Downloading scientific_string-0.1.0-py3-none-any.whl (4.0 kB) │ Downloading scipy-1.15.2-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (37.3 MB) │ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 136.7 MB/s eta 0:00:00 │ Downloading seaborn-0.13.2-py3-none-any.whl (294 kB) │ Downloading contourpy-1.3.1-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (323 kB) │ Downloading cycler-0.12.1-py3-none-any.whl (8.3 kB) │ Downloading fonttools-4.56.0-cp312-cp312-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (4.9 MB) │ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.9/4.9 MB 121.8 MB/s eta 0:00:00 │ Downloading kiwisolver-1.4.8-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (1.5 MB) │ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.5/1.5 MB 78.3 MB/s eta 0:00:00 │ Downloading llvmlite-0.44.0-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (42.4 MB) │ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 42.4/42.4 MB 120.0 MB/s eta 0:00:00 │ Downloading pillow-11.1.0-cp312-cp312-manylinux_2_28_x86_64.whl (4.5 MB) │ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.5/4.5 MB 114.8 MB/s eta 0:00:00 │ Downloading pyparsing-3.2.1-py3-none-any.whl (107 kB) │ Downloading python_dateutil-2.9.0.post0-py2.py3-none-any.whl (229 kB) │ Downloading pytz-2025.1-py2.py3-none-any.whl (507 kB) │ Downloading tzdata-2025.1-py2.py3-none-any.whl (346 kB) │ Downloading six-1.17.0-py2.py3-none-any.whl (11 kB) │ Building wheels for collected packages: qha, text-stream │ Building wheel for qha (setup.py): started │ Building wheel for qha (setup.py): finished with status 'done' │ Created wheel for qha: filename=qha-1.0.20-py3-none-any.whl size=57117 sha256=1c8b4845fe7262e00016c3c533ea6424a8d7f9192e50ecd6f56144780edb0a4b │ Stored in directory: /tmp/pip-ephem-wheel-cache-dl2mzdd_/wheels/a4/27/cc/373477d94235056992d8c6b9be80cd77bd6b507c84b1657ce1 │ Building wheel for text-stream (setup.py): started │ Building wheel for text-stream (setup.py): finished with status 'done' │ Created wheel for text-stream: filename=text_stream-0.2.0-py3-none-any.whl size=4099 sha256=ac58b1a225de7951772672a745cf91ab40247d57e133ad57103cb3d72401be7a │ Stored in directory: /home/pkgeval/.cache/pip/wheels/13/5a/ee/2701513b92267f7da734705913d5bd744dd7582a075167db3f │ Successfully built qha text-stream │ Installing collected packages: text-stream, scientific-string, pytz, mpmath, lazy_property, tzdata, six, pyyaml, pyparsing, pillow, numpy, llvmlite, kiwisolver, fonttools, cycler, scipy, python-dateutil, numba, contourpy, pandas, matplotlib, seaborn, qha │ Attempting uninstall: numpy │ Found existing installation: numpy 2.2.3 │ Uninstalling numpy-2.2.3: │ Successfully uninstalled numpy-2.2.3 │ Successfully installed contourpy-1.3.1 cycler-0.12.1 fonttools-4.56.0 kiwisolver-1.4.8 lazy_property-0.0.1 llvmlite-0.44.0 matplotlib-3.10.1 mpmath-1.3.0 numba-0.61.0 numpy-2.1.3 pandas-2.2.3 pillow-11.1.0 pyparsing-3.2.1 python-dateutil-2.9.0.post0 pytz-2025.1 pyyaml-6.0.2 qha-1.0.20 scientific-string-0.1.0 scipy-1.15.2 seaborn-0.13.2 six-1.17.0 text-stream-0.2.0 tzdata-2025.1 └ ERROR: LoadError: The following 1 direct dependency failed to precompile: Express Failed to precompile Express [b12df14e-adf7-11e9-0606-d5813a258349] to "/home/pkgeval/.julia/compiled/v1.13/Express/jl_OxeRWK" (ProcessExited(1)). ERROR: LoadError: InitError: PyError (PyImport_ImportModule) TypingError('Failed in nopython mode pipeline (step: nopython frontend)\n\x1b[1m\x1b[1mUntyped global name \'ho_free_energy\':\x1b[0m \x1b[1m\x1b[1mCannot determine Numba type of \x1b[0m\n\x1b[1m\nFile ".julia/conda/3/x86_64/lib/python3.12/site-packages/qha/single_configuration.py", line 45:\x1b[0m\n\x1b[1mdef free_energy(temperature: Scalar, q_weights: Vector, static_energies: Vector, frequencies: Array3D,\n \n scaled_q_weights: Vector = q_weights / np.sum(q_weights)\n\x1b[1m vibrational_energies: Vector = np.dot(ho_free_energy(temperature, frequencies).sum(axis=2), scaled_q_weights)\n\x1b[0m \x1b[1m^\x1b[0m\x1b[0m\n\x1b[0m\n\x1b[0m\x1b[1mDuring: Pass nopython_type_inference\x1b[0m') File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/qha/calculator.py", line 20, in import qha.multi_configurations.different_phonon_dos as different_phonon_dos File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/qha/multi_configurations/different_phonon_dos.py", line 17, in from qha.single_configuration import free_energy File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/qha/single_configuration.py", line 20, in @jit(float64[:](float64, float64[:], float64[:], float64[:, :, :], boolean), cache=True) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/decorators.py", line 232, in wrapper disp.compile(sig) File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/dispatcher.py", line 904, in compile cres = self._compiler.compile(args, return_type) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/dispatcher.py", line 84, in compile raise retval File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/dispatcher.py", line 94, in _compile_cached retval = self._compile_core(args, return_type) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/dispatcher.py", line 107, in _compile_core cres = compiler.compile_extra(self.targetdescr.typing_context, ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler.py", line 739, in compile_extra return pipeline.compile_extra(func) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler.py", line 439, in compile_extra return self._compile_bytecode() ^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler.py", line 505, in _compile_bytecode return self._compile_core() ^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler.py", line 484, in _compile_core raise e File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler.py", line 473, in _compile_core pm.run(self.state) File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler_machinery.py", line 367, in run raise patched_exception File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler_machinery.py", line 356, in run self._runPass(idx, pass_inst, state) File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler_lock.py", line 35, in _acquire_compile_lock return func(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler_machinery.py", line 311, in _runPass mutated |= check(pss.run_pass, internal_state) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler_machinery.py", line 272, in check mangled = func(compiler_state) ^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typed_passes.py", line 112, in run_pass typemap, return_type, calltypes, errs = type_inference_stage( ^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typed_passes.py", line 91, in type_inference_stage infer.build_constraint() File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typeinfer.py", line 1027, in build_constraint self.constrain_statement(inst) File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typeinfer.py", line 1389, in constrain_statement self.typeof_assign(inst) File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typeinfer.py", line 1464, in typeof_assign self.typeof_global(inst, inst.target, value) File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typeinfer.py", line 1564, in typeof_global typ = self.resolve_value_type(inst, gvar.value) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typeinfer.py", line 1485, in resolve_value_type raise TypingError(msg, loc=inst.loc) Stacktrace: [1] pyimport(name::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:558 [2] __init__() @ PyQHA ~/.julia/packages/PyQHA/S6CTK/src/PyQHA.jl:22 [3] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1424 [4] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1412 [5] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool) @ Base ./loading.jl:1300 [6] _include_from_serialized (repeats 2 times) @ ./loading.jl:1246 [inlined] [7] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2126 [8] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2630 [9] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2493 [10] macro expansion @ ./loading.jl:2421 [inlined] [11] macro expansion @ ./lock.jl:376 [inlined] [12] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [13] #invoke_in_world#2 @ ./essentials.jl:1125 [inlined] [14] invoke_in_world @ ./essentials.jl:1121 [inlined] [15] require(into::Module, mod::Symbol) @ Base ./loading.jl:2366 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [17] top-level scope @ ~/.julia/packages/Express/G2zCJ/src/QuasiHarmonicApproxWorkflow/QuasiHarmonicApproxWorkflow.jl:11 [18] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [19] top-level scope @ ~/.julia/packages/Express/G2zCJ/src/Express.jl:41 [20] include(mod::Module, _path::String) @ Base ./Base.jl:306 [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3004 [22] top-level scope @ stdin:6 [23] eval(m::Module, e::Any) @ Core ./boot.jl:488 [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2855 [25] include_string @ ./loading.jl:2865 [inlined] [26] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [27] _start() @ Base ./client.jl:560 during initialization of module PyQHA in expression starting at /home/pkgeval/.julia/packages/Express/G2zCJ/src/QuasiHarmonicApproxWorkflow/actions.jl:2 in expression starting at /home/pkgeval/.julia/packages/Express/G2zCJ/src/QuasiHarmonicApproxWorkflow/QuasiHarmonicApproxWorkflow.jl:1 in expression starting at /home/pkgeval/.julia/packages/Express/G2zCJ/src/Express.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 715.04s ################################################################################ # Loading # Loading Express... Precompiling packages... Info Given Express was explicitly requested, output will be shown live  ERROR: LoadError: InitError: PyError (PyImport_ImportModule) TypingError('Failed in nopython mode pipeline (step: nopython frontend)\n\x1b[1m\x1b[1mUntyped global name \'ho_free_energy\':\x1b[0m \x1b[1m\x1b[1mCannot determine Numba type of \x1b[0m\n\x1b[1m\nFile ".julia/conda/3/x86_64/lib/python3.12/site-packages/qha/single_configuration.py", line 45:\x1b[0m\n\x1b[1mdef free_energy(temperature: Scalar, q_weights: Vector, static_energies: Vector, frequencies: Array3D,\n \n scaled_q_weights: Vector = q_weights / np.sum(q_weights)\n\x1b[1m vibrational_energies: Vector = np.dot(ho_free_energy(temperature, frequencies).sum(axis=2), scaled_q_weights)\n\x1b[0m \x1b[1m^\x1b[0m\x1b[0m\n\x1b[0m\n\x1b[0m\x1b[1mDuring: Pass nopython_type_inference\x1b[0m')  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/qha/calculator.py", line 20, in  import qha.multi_configurations.different_phonon_dos as different_phonon_dos  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/qha/multi_configurations/different_phonon_dos.py", line 17, in  from qha.single_configuration import free_energy  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/qha/single_configuration.py", line 20, in  @jit(float64[:](float64, float64[:], float64[:], float64[:, :, :], boolean), cache=True)  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/decorators.py", line 232, in wrapper  disp.compile(sig)  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/dispatcher.py", line 904, in compile  cres = self._compiler.compile(args, return_type)  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/dispatcher.py", line 84, in compile  raise retval  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/dispatcher.py", line 94, in _compile_cached  retval = self._compile_core(args, return_type)  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/dispatcher.py", line 107, in _compile_core  cres = compiler.compile_extra(self.targetdescr.typing_context,  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler.py", line 739, in compile_extra  return pipeline.compile_extra(func)  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler.py", line 439, in compile_extra  return self._compile_bytecode()  ^^^^^^^^^^^^^^^^^^^^^^^^  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler.py", line 505, in _compile_bytecode  return self._compile_core()  ^^^^^^^^^^^^^^^^^^^^  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler.py", line 484, in _compile_core  raise e  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler.py", line 473, in _compile_core  pm.run(self.state)  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler_machinery.py", line 367, in run  raise patched_exception  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler_machinery.py", line 356, in run  self._runPass(idx, pass_inst, state)  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler_lock.py", line 35, in _acquire_compile_lock  return func(*args, **kwargs)  ^^^^^^^^^^^^^^^^^^^^^  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler_machinery.py", line 311, in _runPass  mutated |= check(pss.run_pass, internal_state)  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler_machinery.py", line 272, in check  mangled = func(compiler_state)  ^^^^^^^^^^^^^^^^^^^^  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typed_passes.py", line 112, in run_pass  typemap, return_type, calltypes, errs = type_inference_stage(  ^^^^^^^^^^^^^^^^^^^^^  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typed_passes.py", line 91, in type_inference_stage  infer.build_constraint()  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typeinfer.py", line 1027, in build_constraint  self.constrain_statement(inst)  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typeinfer.py", line 1389, in constrain_statement  self.typeof_assign(inst)  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typeinfer.py", line 1464, in typeof_assign  self.typeof_global(inst, inst.target, value)  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typeinfer.py", line 1564, in typeof_global  typ = self.resolve_value_type(inst, gvar.value)  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typeinfer.py", line 1485, in resolve_value_type  raise TypingError(msg, loc=inst.loc)  Stacktrace:  [1] pyimport(name::String)  @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:558  [2] __init__()  @ PyQHA ~/.julia/packages/PyQHA/S6CTK/src/PyQHA.jl:22  [3] run_module_init(mod::Module, i::Int64)  @ Base ./loading.jl:1424  [4] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)  @ Base ./loading.jl:1412  [5] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool)  @ Base ./loading.jl:1300  [6] _include_from_serialized (repeats 2 times)  @ ./loading.jl:1246 [inlined]  [7] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})  @ Base ./loading.jl:2126  [8] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2630  [9] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2493  [10] macro expansion  @ ./loading.jl:2421 [inlined]  [11] macro expansion  @ ./lock.jl:376 [inlined]  [12] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2386  [13] #invoke_in_world#2  @ ./essentials.jl:1125 [inlined]  [14] invoke_in_world  @ ./essentials.jl:1121 [inlined]  [15] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2366  [16] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:307  [17] top-level scope  @ ~/.julia/packages/Express/G2zCJ/src/QuasiHarmonicApproxWorkflow/QuasiHarmonicApproxWorkflow.jl:11  [18] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:307  [19] top-level scope  @ ~/.julia/packages/Express/G2zCJ/src/Express.jl:41  [20] include(mod::Module, _path::String)  @ Base ./Base.jl:306  [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3004  [22] top-level scope  @ stdin:6  [23] eval(m::Module, e::Any)  @ Core ./boot.jl:488  [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2855  [25] include_string  @ ./loading.jl:2865 [inlined]  [26] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:326  [27] _start()  @ Base ./client.jl:560 during initialization of module PyQHA in expression starting at /home/pkgeval/.julia/packages/Express/G2zCJ/src/QuasiHarmonicApproxWorkflow/actions.jl:2 in expression starting at /home/pkgeval/.julia/packages/Express/G2zCJ/src/QuasiHarmonicApproxWorkflow/QuasiHarmonicApproxWorkflow.jl:1 in expression starting at /home/pkgeval/.julia/packages/Express/G2zCJ/src/Express.jl:1 in expression starting at stdin:6 ✗ Express 0 dependencies successfully precompiled in 51 seconds. 139 already precompiled. ERROR: The following 1 direct dependency failed to precompile: Express Failed to precompile Express [b12df14e-adf7-11e9-0606-d5813a258349] to "/home/pkgeval/.julia/compiled/v1.13/Express/jl_GdnWh9" (ProcessExited(1)). ERROR: LoadError: InitError: PyError (PyImport_ImportModule) TypingError('Failed in nopython mode pipeline (step: nopython frontend)\n\x1b[1m\x1b[1mUntyped global name \'ho_free_energy\':\x1b[0m \x1b[1m\x1b[1mCannot determine Numba type of \x1b[0m\n\x1b[1m\nFile ".julia/conda/3/x86_64/lib/python3.12/site-packages/qha/single_configuration.py", line 45:\x1b[0m\n\x1b[1mdef free_energy(temperature: Scalar, q_weights: Vector, static_energies: Vector, frequencies: Array3D,\n \n scaled_q_weights: Vector = q_weights / np.sum(q_weights)\n\x1b[1m vibrational_energies: Vector = np.dot(ho_free_energy(temperature, frequencies).sum(axis=2), scaled_q_weights)\n\x1b[0m \x1b[1m^\x1b[0m\x1b[0m\n\x1b[0m\n\x1b[0m\x1b[1mDuring: Pass nopython_type_inference\x1b[0m') File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/qha/calculator.py", line 20, in import qha.multi_configurations.different_phonon_dos as different_phonon_dos File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/qha/multi_configurations/different_phonon_dos.py", line 17, in from qha.single_configuration import free_energy File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/qha/single_configuration.py", line 20, in @jit(float64[:](float64, float64[:], float64[:], float64[:, :, :], boolean), cache=True) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/decorators.py", line 232, in wrapper disp.compile(sig) File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/dispatcher.py", line 904, in compile cres = self._compiler.compile(args, return_type) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/dispatcher.py", line 84, in compile raise retval File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/dispatcher.py", line 94, in _compile_cached retval = self._compile_core(args, return_type) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/dispatcher.py", line 107, in _compile_core cres = compiler.compile_extra(self.targetdescr.typing_context, ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler.py", line 739, in compile_extra return pipeline.compile_extra(func) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler.py", line 439, in compile_extra return self._compile_bytecode() ^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler.py", line 505, in _compile_bytecode return self._compile_core() ^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler.py", line 484, in _compile_core raise e File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler.py", line 473, in _compile_core pm.run(self.state) File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler_machinery.py", line 367, in run raise patched_exception File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler_machinery.py", line 356, in run self._runPass(idx, pass_inst, state) File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler_lock.py", line 35, in _acquire_compile_lock return func(*args, **kwargs) ^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler_machinery.py", line 311, in _runPass mutated |= check(pss.run_pass, internal_state) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/compiler_machinery.py", line 272, in check mangled = func(compiler_state) ^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typed_passes.py", line 112, in run_pass typemap, return_type, calltypes, errs = type_inference_stage( ^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typed_passes.py", line 91, in type_inference_stage infer.build_constraint() File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typeinfer.py", line 1027, in build_constraint self.constrain_statement(inst) File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typeinfer.py", line 1389, in constrain_statement self.typeof_assign(inst) File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typeinfer.py", line 1464, in typeof_assign self.typeof_global(inst, inst.target, value) File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typeinfer.py", line 1564, in typeof_global typ = self.resolve_value_type(inst, gvar.value) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/numba/core/typeinfer.py", line 1485, in resolve_value_type raise TypingError(msg, loc=inst.loc) Stacktrace: [1] pyimport(name::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:558 [2] __init__() @ PyQHA ~/.julia/packages/PyQHA/S6CTK/src/PyQHA.jl:22 [3] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1424 [4] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1412 [5] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}, ignore_native::Nothing; register::Bool) @ Base ./loading.jl:1300 [6] _include_from_serialized (repeats 2 times) @ ./loading.jl:1246 [inlined] [7] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2126 [8] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2630 [9] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2493 [10] macro expansion @ ./loading.jl:2421 [inlined] [11] macro expansion @ ./lock.jl:376 [inlined] [12] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [13] #invoke_in_world#2 @ ./essentials.jl:1125 [inlined] [14] invoke_in_world @ ./essentials.jl:1121 [inlined] [15] require(into::Module, mod::Symbol) @ Base ./loading.jl:2366 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [17] top-level scope @ ~/.julia/packages/Express/G2zCJ/src/QuasiHarmonicApproxWorkflow/QuasiHarmonicApproxWorkflow.jl:11 [18] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [19] top-level scope @ ~/.julia/packages/Express/G2zCJ/src/Express.jl:41 [20] include(mod::Module, _path::String) @ Base ./Base.jl:306 [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3004 [22] top-level scope @ stdin:6 [23] eval(m::Module, e::Any) @ Core ./boot.jl:488 [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2855 [25] include_string @ ./loading.jl:2865 [inlined] [26] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [27] _start() @ Base ./client.jl:560 during initialization of module PyQHA in expression starting at /home/pkgeval/.julia/packages/Express/G2zCJ/src/QuasiHarmonicApproxWorkflow/actions.jl:2 in expression starting at /home/pkgeval/.julia/packages/Express/G2zCJ/src/QuasiHarmonicApproxWorkflow/QuasiHarmonicApproxWorkflow.jl:1 in expression starting at /home/pkgeval/.julia/packages/Express/G2zCJ/src/Express.jl:1 in expression starting at stdin: Loading failed after 54.16s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using Express'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:598 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:513 [3] run(::Cmd) @ Base ./process.jl:510 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:306 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [7] _start() @ Base ./client.jl:560 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 952.84s: package fails to precompile