Package evaluation of DelayEmbeddings on Julia 1.13.0-DEV.140 (fac1ce7906*) started at 2025-03-02T11:17:10.703 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 7.57s ################################################################################ # Installation # Installing DelayEmbeddings... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [5732040d] + DelayEmbeddings v2.8.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [66dad0bd] + AliasTables v1.1.3 [34da2185] + Compat v4.16.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.20 [5732040d] + DelayEmbeddings v2.8.0 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.117 [ffbed154] + DocStringExtensions v0.9.3 [1a297f60] + FillArrays v1.13.0 [34004b35] + HypergeometricFunctions v0.3.27 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e1d29d7a] + Missings v1.2.0 [b8a86587] + NearestNeighbors v0.4.21 [645ca80c] + Neighborhood v0.2.4 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.32 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [79098fc4] + Rmath v0.8.0 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [40b095a5] + StateSpaceSets v2.4.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.3.2 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.3.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 Installation completed after 3.02s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 244.71s ################################################################################ # Testing # Testing DelayEmbeddings Status `/tmp/jl_2WYXnp/Project.toml` [5732040d] DelayEmbeddings v2.8.0 [8bb1440f] DelimitedFiles v1.9.1 [6e36e845] DynamicalSystemsBase v3.13.2 [f43a241f] Downloads v1.7.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_2WYXnp/Manifest.toml` [47edcb42] ADTypes v1.13.0 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.2.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.18.0 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] CPUSummary v0.2.6 [fb6a15b2] CloseOpenIntervals v0.1.13 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.16.0 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [187b0558] ConstructionBase v1.5.8 [adafc99b] CpuId v0.3.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures 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v0.1.17 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.15 [d125e4d3] ManualMemory v0.1.8 [e1d29d7a] Missings v1.2.0 [2e0e35c7] Moshi v0.3.5 [46d2c3a1] MuladdMacro v0.2.4 [77ba4419] NaNMath v1.1.2 [b8a86587] NearestNeighbors v0.4.21 [645ca80c] Neighborhood v0.2.4 [bac558e1] OrderedCollections v1.8.0 [bbf590c4] OrdinaryDiffEqCore v1.18.1 [b1df2697] OrdinaryDiffEqTsit5 v1.1.0 [90014a1f] PDMats v0.11.32 [d96e819e] Parameters v0.12.3 [f517fe37] Polyester v0.7.16 [1d0040c9] PolyesterWeave v0.2.2 [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v3.31.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.8.0 [f2b01f46] Roots v2.2.6 [7e49a35a] RuntimeGeneratedFunctions v0.5.13 [94e857df] SIMDTypes v0.1.0 [0bca4576] SciMLBase v2.75.1 [c0aeaf25] SciMLOperators v0.3.12 [53ae85a6] SciMLStructures v1.6.1 [efcf1570] Setfield v1.1.2 [ce78b400] SimpleUnPack v1.1.0 [a2af1166] SortingAlgorithms v1.2.1 [276daf66] SpecialFunctions v2.5.0 [40b095a5] StateSpaceSets v2.4.0 [aedffcd0] Static v1.1.1 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 [4c63d2b9] StatsFuns v1.3.2 [7792a7ef] StrideArraysCore v0.5.7 [2efcf032] SymbolicIndexingInterface v0.3.38 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [8290d209] ThreadingUtilities v0.5.2 [781d530d] TruncatedStacktraces v1.4.0 [3a884ed6] UnPack v1.0.2 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.11.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2024.12.31 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.0.16+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.64.0+1 Testing Running tests... running test file embedding_tests.jl multivariate: Error During Test at /home/pkgeval/.julia/packages/DelayEmbeddings/mIege/test/embedding_tests.jl:69 Got exception outside of a @test MethodError: Cannot `convert` an object of type Float64 to an object of type SVector{3, Float64} The function `convert` exists, but no method is defined for this combination of argument types. Closest candidates are: (::Type{SA})(::Any...) where SA<:StaticArraysCore.StaticArray @ StaticArrays ~/.julia/packages/StaticArrays/LSPcF/src/convert.jl:173 convert(::Type{T}, !Matched::T) where T @ Base Base_compiler.jl:134 convert(::Type{SA}, !Matched::AbstractArray) where SA<:StaticArraysCore.StaticArray @ StaticArrays ~/.julia/packages/StaticArrays/LSPcF/src/convert.jl:207 ... Stacktrace: [1] macro expansion @ ~/.julia/packages/StaticArraysCore/7xxEJ/src/StaticArraysCore.jl:88 [inlined] [2] convert_ntuple @ ~/.julia/packages/StaticArraysCore/7xxEJ/src/StaticArraysCore.jl:84 [inlined] [3] SVector{3, SVector{3, Float64}}(x::Tuple{Float64, Float64, Float64}) @ StaticArraysCore ~/.julia/packages/StaticArraysCore/7xxEJ/src/StaticArraysCore.jl:120 [4] convert @ ~/.julia/packages/StaticArrays/LSPcF/src/convert.jl:189 [inlined] [5] setindex! @ ./array.jl:985 [inlined] [6] genembed @ ~/.julia/packages/DelayEmbeddings/mIege/src/embeddings/genembed.jl:131 [inlined] [7] genembed(s::StateSpaceSet{3, Float64, SVector{3, Float64}}, τs::Tuple{Int64, Int64, Int64}, js::Tuple{Int64, Int64, Int64}; ws::Nothing) @ DelayEmbeddings ~/.julia/packages/DelayEmbeddings/mIege/src/embeddings/genembed.jl:122 [8] genembed(s::StateSpaceSet{3, Float64, SVector{3, Float64}}, τs::Tuple{Int64, Int64, Int64}, js::Tuple{Int64, Int64, Int64}) @ DelayEmbeddings ~/.julia/packages/DelayEmbeddings/mIege/src/embeddings/genembed.jl:118 [9] top-level scope @ ~/.julia/packages/DelayEmbeddings/mIege/test/embedding_tests.jl:55 [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1771 [inlined] [11] macro expansion @ ~/.julia/packages/DelayEmbeddings/mIege/test/embedding_tests.jl:70 [inlined] [12] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1771 [inlined] [13] macro expansion @ ~/.julia/packages/DelayEmbeddings/mIege/test/embedding_tests.jl:70 [inlined] [14] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [15] IncludeInto @ ./Base.jl:308 [inlined] [16] macro expansion @ ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:6 [inlined] [17] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1771 [inlined] [18] testfile(file::String, testname::String) @ Main ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:6 [19] testfile(file::String) @ Main ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:5 [20] top-level scope @ ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:28 [21] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1771 [inlined] [22] macro expansion @ ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:28 [inlined] [23] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [24] top-level scope @ none:6 [25] eval(m::Module, e::Any) @ Core ./boot.jl:488 [26] exec_options(opts::Base.JLOptions) @ Base ./client.jl:294 [27] _start() @ Base ./client.jl:560 running test file separated/delaytime_test.jl Precompiling packages... 17941.8 ms ✓ StaticArrayInterface 3666.9 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 3721.6 ms ✓ CloseOpenIntervals 3386.7 ms ✓ LayoutPointers 4289.9 ms ✓ StrideArraysCore 3312.9 ms ✓ Polyester 3537.2 ms ✓ FastBroadcast 3253.7 ms ✓ RecursiveArrayTools → RecursiveArrayToolsFastBroadcastExt 16343.0 ms ✓ DiffEqBase 7945.1 ms ✓ DiffEqBase → DiffEqBaseForwardDiffExt 4986.3 ms ✓ DiffEqBase → DiffEqBaseSparseArraysExt 13598.8 ms ✓ OrdinaryDiffEqCore 4929.5 ms ✓ OrdinaryDiffEqCore → OrdinaryDiffEqCoreEnzymeCoreExt 16157.9 ms ✓ OrdinaryDiffEqTsit5 Info Given DynamicalSystemsBase was explicitly requested, output will be shown live  WARNING: llvmcall with integer pointers is deprecated. Use actual pointers instead, replacing i32 or i64 with i8* or ptr in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl 11582.3 ms ✓ DynamicalSystemsBase 15 dependencies successfully precompiled in 120 seconds. 131 already precompiled. 11 dependencies had output during precompilation: ┌ OrdinaryDiffEqTsit5 │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ DiffEqBase │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ OrdinaryDiffEqCore │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ DiffEqBase → DiffEqBaseSparseArraysExt │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ DynamicalSystemsBase │ [Output was shown above] └ ┌ OrdinaryDiffEqCore → OrdinaryDiffEqCoreEnzymeCoreExt │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ Polyester │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ StrideArraysCore │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ FastBroadcast │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ RecursiveArrayTools → RecursiveArrayToolsFastBroadcastExt │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ ┌ DiffEqBase → DiffEqBaseForwardDiffExt │ WARNING: llvmcall with integer pointers is deprecated. │ Use actual pointers instead, replacing i32 or i64 with i8* or ptr │ in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl └ WARNING: llvmcall with integer pointers is deprecated. Use actual pointers instead, replacing i32 or i64 with i8* or ptr in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl Precompiling packages... 2912.8 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 1 dependency successfully precompiled in 3 seconds. 26 already precompiled. Precompiling packages... Info Given DiffEqBaseDistributionsExt was explicitly requested, output will be shown live  WARNING: llvmcall with integer pointers is deprecated. Use actual pointers instead, replacing i32 or i64 with i8* or ptr in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl 6266.1 ms ✓ DiffEqBase → DiffEqBaseDistributionsExt 1 dependency successfully precompiled in 7 seconds. 131 already precompiled. 1 dependency had output during precompilation: ┌ DiffEqBase → DiffEqBaseDistributionsExt │ [Output was shown above] └ ┌ Warning: Did not encounter a minimum, returning last `τ`. └ @ DelayEmbeddings ~/.julia/packages/DelayEmbeddings/mIege/src/separated_de/estimate_delay.jl:82 running test file separated/embedding_dimension_test.jl Algorithm stopped due to convergence of E₁-statistic. Valid embedding achieved ✓. Algorithm stopped due to convergence of E₁-statistic. Valid embedding achieved ✓. Algorithm stopped due to convergence of E₁-statistic. Valid embedding achieved ✓. Stochastic signal, valid embedding NOT achieved ⨉. Algorithm stopped due to sufficiently small FNNs. Valid embedding achieved ✓. Algorithm stopped due to sufficiently small FNNs. Valid embedding achieved ✓. Algorithm stopped due to increasing FNNs. Double-check the FNN-statistic. Algorithm stopped due to sufficiently small FNNs. Valid embedding achieved ✓. Algorithm stopped due to sufficiently small FNNs. Valid embedding achieved ✓. Algorithm stopped due to sufficiently small FNNs. Valid embedding achieved ✓. Algorithm stopped due to increasing FNNs. Double-check the FNN-statistic. running test file unified/test_pecora.jl Pecora multivariate: Error During Test at /home/pkgeval/.julia/packages/DelayEmbeddings/mIege/test/unified/test_pecora.jl:58 Got exception outside of a @test MethodError: Cannot `convert` an object of type Float64 to an object of type SVector{3, Float64} The function `convert` exists, but no method is defined for this combination of argument types. Closest candidates are: (::Type{SA})(::Any...) where SA<:StaticArraysCore.StaticArray @ StaticArrays ~/.julia/packages/StaticArrays/LSPcF/src/convert.jl:173 convert(::Type{T}, !Matched::T) where T @ Base Base_compiler.jl:134 convert(::Type{SA}, !Matched::AbstractArray) where SA<:StaticArraysCore.StaticArray @ StaticArrays ~/.julia/packages/StaticArrays/LSPcF/src/convert.jl:207 ... Stacktrace: [1] macro expansion @ ~/.julia/packages/StaticArraysCore/7xxEJ/src/StaticArraysCore.jl:88 [inlined] [2] convert_ntuple @ ~/.julia/packages/StaticArraysCore/7xxEJ/src/StaticArraysCore.jl:84 [inlined] [3] SVector{1, SVector{3, Float64}}(x::Tuple{Float64}) @ StaticArraysCore ~/.julia/packages/StaticArraysCore/7xxEJ/src/StaticArraysCore.jl:120 [4] convert @ ~/.julia/packages/StaticArrays/LSPcF/src/convert.jl:189 [inlined] [5] setindex! @ ./array.jl:985 [inlined] [6] genembed @ ~/.julia/packages/DelayEmbeddings/mIege/src/embeddings/genembed.jl:131 [inlined] [7] #genembed#25 @ ~/.julia/packages/DelayEmbeddings/mIege/src/embeddings/genembed.jl:122 [inlined] [8] genembed @ ~/.julia/packages/DelayEmbeddings/mIege/src/embeddings/genembed.jl:118 [inlined] [9] pecora(s::StateSpaceSet{3, Float64, SVector{3, Float64}}, τs::Tuple{Int64}, js::Tuple{Int64}; delays::UnitRange{Int64}, J::UnitRange{Int64}, samplesize::Float64, K::Int64, w::Int64, db::Int64, undersampling::Bool, metric::Chebyshev, α::Float64, p::Float64) @ DelayEmbeddings ~/.julia/packages/DelayEmbeddings/mIege/src/unified_de/pecora.jl:216 [10] top-level scope @ ~/.julia/packages/DelayEmbeddings/mIege/test/unified/test_pecora.jl:8 [11] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1771 [inlined] [12] macro expansion @ ~/.julia/packages/DelayEmbeddings/mIege/test/unified/test_pecora.jl:60 [inlined] [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1771 [inlined] [14] macro expansion @ ~/.julia/packages/DelayEmbeddings/mIege/test/unified/test_pecora.jl:71 [inlined] [15] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [16] IncludeInto @ ./Base.jl:308 [inlined] [17] macro expansion @ ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:6 [inlined] [18] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1771 [inlined] [19] testfile(file::String, testname::String) @ Main ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:6 [20] testfile(file::String) @ Main ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:5 [21] top-level scope @ ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:28 [22] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1771 [inlined] [23] macro expansion @ ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:34 [inlined] [24] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [25] top-level scope @ none:6 [26] eval(m::Module, e::Any) @ Core ./boot.jl:488 [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:294 [28] _start() @ Base ./client.jl:560 running test file unified/uzal_cost_test.jl Testing uzal_cost.jl... running test file unified/test_pecuzal_embedding.jl Testing pecuzal_method.jl... Initializing PECUZAL algorithm for univariate input... Starting 1-th embedding cycle... Starting 2-th embedding cycle... Starting 3-th embedding cycle... Starting 4-th embedding cycle... Algorithm stopped due to increasing L-values. VALID embedding achieved ✓. 33.248023 seconds (43.91 M allocations: 3.570 GiB, 5.26% gc time, 69.34% compilation time) Initializing PECUZAL algorithm for univariate input... Starting 1-th embedding cycle... Starting 2-th embedding cycle... Starting 3-th embedding cycle... Starting 4-th embedding cycle... Algorithm stopped due to increasing L-values. VALID embedding achieved ✓. 13.660169 seconds (19.14 M allocations: 1.625 GiB, 2.44% gc time, 65.63% compilation time) Initializing PECUZAL algorithm for univariate input... Starting 1-th embedding cycle... Starting 2-th embedding cycle... Starting 3-th embedding cycle... Algorithm stopped due to increasing L-values. VALID embedding achieved ✓. 12.403193 seconds (48.98 M allocations: 4.339 GiB, 8.92% gc time, 0.39% compilation time) Initializing PECUZAL algorithm for multivariate input... Starting 1-th embedding cycle... Multivariate example: Error During Test at /home/pkgeval/.julia/packages/DelayEmbeddings/mIege/test/unified/test_pecuzal_embedding.jl:69 Got exception outside of a @test MethodError: Cannot `convert` an object of type Float64 to an object of type SVector{3, Float64} The function `convert` exists, but no method is defined for this combination of argument types. Closest candidates are: (::Type{SA})(::Any...) where SA<:StaticArraysCore.StaticArray @ StaticArrays ~/.julia/packages/StaticArrays/LSPcF/src/convert.jl:173 convert(::Type{T}, !Matched::T) where T @ Base Base_compiler.jl:134 convert(::Type{SA}, !Matched::AbstractArray) where SA<:StaticArraysCore.StaticArray @ StaticArrays ~/.julia/packages/StaticArrays/LSPcF/src/convert.jl:207 ... Stacktrace: [1] macro expansion @ ~/.julia/packages/StaticArraysCore/7xxEJ/src/StaticArraysCore.jl:88 [inlined] [2] convert_ntuple @ ~/.julia/packages/StaticArraysCore/7xxEJ/src/StaticArraysCore.jl:84 [inlined] [3] SVector{1, SVector{3, Float64}}(x::Tuple{Float64}) @ StaticArraysCore ~/.julia/packages/StaticArraysCore/7xxEJ/src/StaticArraysCore.jl:120 [4] convert @ ~/.julia/packages/StaticArrays/LSPcF/src/convert.jl:189 [inlined] [5] setindex! @ ./array.jl:985 [inlined] [6] genembed @ ~/.julia/packages/DelayEmbeddings/mIege/src/embeddings/genembed.jl:131 [inlined] [7] #genembed#25 @ ~/.julia/packages/DelayEmbeddings/mIege/src/embeddings/genembed.jl:122 [inlined] [8] genembed @ ~/.julia/packages/DelayEmbeddings/mIege/src/embeddings/genembed.jl:118 [inlined] [9] pecora(s::StateSpaceSet{3, Float64, SVector{3, Float64}}, τs::Tuple{Int64}, js::Tuple{Int64}; delays::UnitRange{Int64}, J::UnitRange{Int64}, samplesize::Int64, K::Int64, w::Int64, db::Int64, undersampling::Bool, metric::Euclidean, α::Float64, p::Float64) @ DelayEmbeddings ~/.julia/packages/DelayEmbeddings/mIege/src/unified_de/pecora.jl:216 [10] first_embedding_cycle_pecuzal!(Ys::StateSpaceSet{3, Float64, SVector{3, Float64}}, M::Int64, τs::UnitRange{Int64}, w::Int64, samplesize::Int64, K::Int64, metric::Euclidean, α::Float64, p::Float64, KNN::Int64, τ_vals::Vector{Int64}, ts_vals::Vector{Int64}, Ls::Vector{Float64}, ε★s::Matrix{Matrix{Float64}}, econ::Bool) @ DelayEmbeddings ~/.julia/packages/DelayEmbeddings/mIege/src/unified_de/pecuzal.jl:257 [11] pecuzal_multivariate_embedding_cycle! @ ~/.julia/packages/DelayEmbeddings/mIege/src/unified_de/pecuzal.jl:230 [inlined] [12] pecuzal_embedding(Y::StateSpaceSet{3, Float64, SVector{3, Float64}}; τs::UnitRange{Int64}, w::Int64, samplesize::Int64, K::Int64, KNN::Int64, L_threshold::Int64, α::Float64, p::Float64, max_cycles::Int64, econ::Bool, verbose::Bool) @ DelayEmbeddings ~/.julia/packages/DelayEmbeddings/mIege/src/unified_de/pecuzal.jl:170 [13] macro expansion @ ./timing.jl:621 [inlined] [14] macro expansion @ ~/.julia/packages/DelayEmbeddings/mIege/test/unified/test_pecuzal_embedding.jl:78 [inlined] [15] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1771 [inlined] [16] macro expansion @ ~/.julia/packages/DelayEmbeddings/mIege/test/unified/test_pecuzal_embedding.jl:72 [inlined] [17] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1771 [inlined] [18] top-level scope @ ~/.julia/packages/DelayEmbeddings/mIege/test/unified/test_pecuzal_embedding.jl:18 [19] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [20] IncludeInto @ ./Base.jl:308 [inlined] [21] macro expansion @ ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:6 [inlined] [22] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1771 [inlined] [23] testfile(file::String, testname::String) @ Main ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:6 [24] testfile(file::String) @ Main ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:5 [25] top-level scope @ ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:28 [26] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1771 [inlined] [27] macro expansion @ ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:36 [inlined] [28] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [29] top-level scope @ none:6 [30] eval(m::Module, e::Any) @ Core ./boot.jl:488 [31] exec_options(opts::Base.JLOptions) @ Base ./client.jl:294 [32] _start() @ Base ./client.jl:560 Initializing PECUZAL algorithm for multivariate input... Starting 1-th embedding cycle... Dummy example: Error During Test at /home/pkgeval/.julia/packages/DelayEmbeddings/mIege/test/unified/test_pecuzal_embedding.jl:117 Got exception outside of a @test MethodError: Cannot `convert` an object of type Float64 to an object of type SVector{2, Float64} The function `convert` exists, but no method is defined for this combination of argument types. Closest candidates are: (::Type{SA})(::Any...) where SA<:StaticArraysCore.StaticArray @ StaticArrays ~/.julia/packages/StaticArrays/LSPcF/src/convert.jl:173 convert(::Type{T}, !Matched::T) where T @ Base Base_compiler.jl:134 convert(::Type{SA}, !Matched::AbstractArray) where SA<:StaticArraysCore.StaticArray @ StaticArrays ~/.julia/packages/StaticArrays/LSPcF/src/convert.jl:207 ... Stacktrace: [1] macro expansion @ ~/.julia/packages/StaticArraysCore/7xxEJ/src/StaticArraysCore.jl:88 [inlined] [2] convert_ntuple @ ~/.julia/packages/StaticArraysCore/7xxEJ/src/StaticArraysCore.jl:84 [inlined] [3] SVector{1, SVector{2, Float64}}(x::Tuple{Float64}) @ StaticArraysCore ~/.julia/packages/StaticArraysCore/7xxEJ/src/StaticArraysCore.jl:120 [4] convert @ ~/.julia/packages/StaticArrays/LSPcF/src/convert.jl:189 [inlined] [5] setindex! @ ./array.jl:985 [inlined] [6] genembed @ ~/.julia/packages/DelayEmbeddings/mIege/src/embeddings/genembed.jl:131 [inlined] [7] #genembed#25 @ ~/.julia/packages/DelayEmbeddings/mIege/src/embeddings/genembed.jl:122 [inlined] [8] genembed @ ~/.julia/packages/DelayEmbeddings/mIege/src/embeddings/genembed.jl:118 [inlined] [9] pecora(s::StateSpaceSet{2, Float64, SVector{2, Float64}}, τs::Tuple{Int64}, js::Tuple{Int64}; delays::UnitRange{Int64}, J::UnitRange{Int64}, samplesize::Int64, K::Int64, w::Int64, db::Int64, undersampling::Bool, metric::Euclidean, α::Float64, p::Float64) @ DelayEmbeddings ~/.julia/packages/DelayEmbeddings/mIege/src/unified_de/pecora.jl:216 [10] first_embedding_cycle_pecuzal!(Ys::StateSpaceSet{2, Float64, SVector{2, Float64}}, M::Int64, τs::UnitRange{Int64}, w::Int64, samplesize::Int64, K::Int64, metric::Euclidean, α::Float64, p::Float64, KNN::Int64, τ_vals::Vector{Int64}, ts_vals::Vector{Int64}, Ls::Vector{Float64}, ε★s::Matrix{Matrix{Float64}}, econ::Bool) @ DelayEmbeddings ~/.julia/packages/DelayEmbeddings/mIege/src/unified_de/pecuzal.jl:257 [11] pecuzal_multivariate_embedding_cycle! @ ~/.julia/packages/DelayEmbeddings/mIege/src/unified_de/pecuzal.jl:230 [inlined] [12] pecuzal_embedding(Y::StateSpaceSet{2, Float64, SVector{2, Float64}}; τs::UnitRange{Int64}, w::Int64, samplesize::Int64, K::Int64, KNN::Int64, L_threshold::Int64, α::Float64, p::Float64, max_cycles::Int64, econ::Bool, verbose::Bool) @ DelayEmbeddings ~/.julia/packages/DelayEmbeddings/mIege/src/unified_de/pecuzal.jl:170 [13] macro expansion @ ./timing.jl:621 [inlined] [14] macro expansion @ ~/.julia/packages/DelayEmbeddings/mIege/test/unified/test_pecuzal_embedding.jl:129 [inlined] [15] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1771 [inlined] [16] macro expansion @ ~/.julia/packages/DelayEmbeddings/mIege/test/unified/test_pecuzal_embedding.jl:119 [inlined] [17] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1771 [inlined] [18] top-level scope @ ~/.julia/packages/DelayEmbeddings/mIege/test/unified/test_pecuzal_embedding.jl:18 [19] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [20] IncludeInto @ ./Base.jl:308 [inlined] [21] macro expansion @ ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:6 [inlined] [22] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1771 [inlined] [23] testfile(file::String, testname::String) @ Main ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:6 [24] testfile(file::String) @ Main ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:5 [25] top-level scope @ ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:28 [26] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1771 [inlined] [27] macro expansion @ ~/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:36 [inlined] [28] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:307 [29] top-level scope @ none:6 [30] eval(m::Module, e::Any) @ Core ./boot.jl:488 [31] exec_options(opts::Base.JLOptions) @ Base ./client.jl:294 [32] _start() @ Base ./client.jl:560 running test file unified/test_garcia.jl Testing garcia_almeida.jl... Algorithm stopped due to rising FNNs. Valid embedding achieved ✓. Algorithm stopped due to rising FNNs. Valid embedding achieved ✓. Algorithm stopped due to sufficiently small FNNs. Valid embedding achieved ✓. Algorithm stopped due to rising FNNs. Valid embedding achieved ✓. Algorithm stopped due to rising FNNs. Valid embedding achieved ✓. running test file unified/mdop_tests.jl Testing mdop_embedding.jl... Algorithm stopped due to sufficiently small FNNs. Valid embedding achieved ✓. Algorithm stopped due to sufficiently small FNNs. Valid embedding achieved ✓. Algorithm stopped due to rising FNNs. Valid embedding achieved ✓. Algorithm stopped due to sufficiently small FNNs. Valid embedding achieved ✓. Test Summary: | Pass Error Total Time DelayEmbeddings tests | 167 4 171 10m22.7s Embedding tests | 48 1 49 15.4s embed | 38 38 3.9s genembed | 10 1 11 8.6s univariate | 4 4 0.5s multivariate | 1 1 6.2s weighted | 3 3 0.7s weighted integer | 3 3 0.7s Delaytime test | 12 12 2m49.2s Embedding dimension test | 12 12 1m49.2s Test pecora | 7 1 8 38.9s Pecora | 7 1 8 38.8s Pecora univariate | 7 7 24.8s Pecora multivariate | 1 1 7.6s Uzal cost test | 21 21 21.3s Test pecuzal embedding | 21 2 23 1m09.3s PECUZAL | 21 2 23 1m06.4s Univariate example | 21 21 1m00.5s Multivariate example | 1 1 3.0s Dummy example | 1 1 2.8s Test garcia | 25 25 2m12.2s Mdop tests | 21 21 1m05.5s RNG of the outermost testset: Xoshiro(0x4be6c2b813825ad5, 0x362becb367b34d6c, 0xa05cff0af92c7c46, 0x328ec9f6b04702d9, 0x722309c7fa6bc466) ERROR: LoadError: Some tests did not pass: 167 passed, 0 failed, 4 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/DelayEmbeddings/mIege/test/runtests.jl:27 Testing failed after 639.69s ERROR: LoadError: Package DelayEmbeddings errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2386 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2241 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:486 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:164 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [7] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:151 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:306 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [12] _start() @ Base ./client.jl:560 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 955.78s: package tests unexpectedly errored