Package evaluation of BSTModelKit on Julia 1.13.0-DEV.140 (fac1ce7906*) started at 2025-03-02T20:33:02.800 ################################################################################ # Set-up # Set-up completed after 0.2s ################################################################################ # Installation # Installing BSTModelKit... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [6cdf8678] + BSTModelKit v0.1.3 Updating `~/.julia/environments/v1.13/Manifest.toml` ⌅ [47edcb42] + ADTypes v0.2.7 [621f4979] + AbstractFFTs v1.5.0 [7d9f7c33] + Accessors v0.1.42 ⌅ [79e6a3ab] + Adapt v3.7.2 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.4.0 [ec485272] + ArnoldiMethod v0.4.0 ⌃ [4fba245c] + ArrayInterface v7.7.1 [4c555306] + ArrayLayouts v1.11.1 ⌃ [13072b0f] + AxisAlgorithms v1.0.1 [6cdf8678] + BSTModelKit v0.1.3 [aae01518] + BandedMatrices v1.9.2 [198e06fe] + BangBang v0.4.4 [9718e550] + Baselet v0.1.1 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 ⌃ [764a87c0] + BoundaryValueDiffEq v5.6.3 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.6 [d360d2e6] + ChainRulesCore v1.25.1 [fb6a15b2] + CloseOpenIntervals v0.1.13 [861a8166] + Combinatorics v1.0.2 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.5.8 ⌅ [ae264745] + Copulas v0.1.13 [adafc99b] + CpuId v0.3.1 [667455a9] + Cubature v1.5.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.20 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 ⌃ [bcd4f6db] + DelayDiffEq v5.44.0 [8bb1440f] + DelimitedFiles v1.9.1 ⌃ [2b5f629d] + DiffEqBase v6.145.2 ⌅ [459566f4] + DiffEqCallbacks v2.35.0 [77a26b50] + DiffEqNoiseProcess v5.24.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 ⌃ [0c46a032] + DifferentialEquations v7.11.0 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.117 [ffbed154] + DocStringExtensions v0.9.3 [4e289a0a] + EnumX v1.0.4 ⌅ [f151be2c] + EnzymeCore v0.6.6 [d4d017d3] + ExponentialUtilities v1.27.0 [e2ba6199] + ExprTools v0.1.10 [7a1cc6ca] + FFTW v1.8.1 [9d29842c] + FastAlmostBandedMatrices v0.1.4 ⌅ [7034ab61] + FastBroadcast v0.2.8 [9aa1b823] + FastClosures v0.3.2 [29a986be] + FastLapackInterface v2.0.4 [5789e2e9] + FileIO v1.17.0 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [f6369f11] + ForwardDiff v0.10.38 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 ⌅ [d9f16b24] + Functors v0.4.12 ⌅ [46192b85] + GPUArraysCore v0.1.5 [92c85e6c] + GSL v1.0.1 [c145ed77] + GenericSchur v0.5.4 ⌃ [af5da776] + GlobalSensitivity v2.4.0 [86223c79] + Graphs v1.12.0 [3e5b6fbb] + HostCPUFeatures v0.1.17 [34004b35] + HypergeometricFunctions v0.3.27 [615f187c] + IfElse v0.1.1 [d25df0c9] + Inflate v0.1.5 [22cec73e] + InitialValues v0.3.1 [18e54dd8] + IntegerMathUtils v0.1.2 ⌅ [a98d9a8b] + Interpolations v0.13.6 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.5.11 [692b3bcd] + JLLWrappers v1.7.0 ⌃ [ccbc3e58] + JumpProcesses v9.10.1 ⌅ [ef3ab10e] + KLU v0.4.1 [5ab0869b] + KernelDensity v0.6.9 [ba0b0d4f] + Krylov v0.9.10 [73f95e8e] + LatticeRules v0.0.1 [10f19ff3] + LayoutPointers v0.1.17 [5078a376] + LazyArrays v2.6.1 [2d8b4e74] + LevyArea v1.0.0 [d3d80556] + LineSearches v7.3.0 ⌅ [7ed4a6bd] + LinearSolve v2.22.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [bdcacae8] + LoopVectorization v0.12.171 [1914dd2f] + MacroTools v0.5.15 [d125e4d3] + ManualMemory v0.1.8 [a3b82374] + MatrixFactorizations v3.0.1 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [46d2c3a1] + MuladdMacro v0.2.4 [37188c8d] + MvNormalCDF v0.3.2 [d41bc354] + NLSolversBase v7.8.3 [2774e3e8] + NLsolve v4.5.1 [77ba4419] + NaNMath v1.1.2 ⌅ [8913a72c] + NonlinearSolve v2.8.2 [e7bfaba1] + NumericalIntegration v0.3.3 [6fe1bfb0] + OffsetArrays v1.15.0 [429524aa] + Optim v1.11.0 [bac558e1] + OrderedCollections v1.8.0 ⌃ [1dea7af3] + OrdinaryDiffEq v6.59.3 [90014a1f] + PDMats v0.11.32 [65ce6f38] + PackageExtensionCompat v1.0.2 [d96e819e] + Parameters v0.12.3 [e409e4f3] + PoissonRandom v0.4.4 [f517fe37] + Polyester v0.7.16 [1d0040c9] + PolyesterWeave v0.2.2 [85a6dd25] + PositiveFactorizations v0.2.4 ⌃ [d236fae5] + PreallocationTools v0.4.24 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [27ebfcd6] + Primes v0.5.6 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [8a4e6c94] + QuasiMonteCarlo v0.3.3 [74087812] + Random123 v1.7.0 [e6cf234a] + RandomNumbers v1.6.0 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 ⌅ [731186ca] + RecursiveArrayTools v2.38.10 [f2c3362d] + RecursiveFactorization v0.2.23 [189a3867] + Reexport v1.2.2 [42d2dcc6] + Referenceables v0.1.3 [ae029012] + Requires v1.3.1 [ae5879a3] + ResettableStacks v1.1.1 [79098fc4] + Rmath v0.8.0 [f2b01f46] + Roots v2.2.6 [7e49a35a] + RuntimeGeneratedFunctions v0.5.13 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 ⌃ [0bca4576] + SciMLBase v2.10.0 [e9a6253c] + SciMLNLSolve v0.1.9 [c0aeaf25] + SciMLOperators v0.3.12 [efcf1570] + Setfield v1.1.2 ⌅ [727e6d20] + SimpleNonlinearSolve v0.1.25 [699a6c99] + SimpleTraits v0.9.4 [ce78b400] + SimpleUnPack v1.1.0 [ed01d8cd] + Sobol v1.5.0 [a2af1166] + SortingAlgorithms v1.2.1 ⌃ [47a9eef4] + SparseDiffTools v2.18.0 [e56a9233] + Sparspak v0.3.9 [276daf66] + SpecialFunctions v2.5.0 [171d559e] + SplittablesBase v0.1.15 ⌅ [aedffcd0] + Static v0.8.10 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.3.2 ⌅ [9672c7b4] + SteadyStateDiffEq v1.16.1 ⌃ [789caeaf] + StochasticDiffEq v6.65.1 [7792a7ef] + StrideArraysCore v0.5.7 ⌃ [c3572dad] + Sundials v4.24.0 ⌅ [2efcf032] + SymbolicIndexingInterface v0.2.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [6aa5eb33] + TaylorSeries v0.18.3 [8290d209] + ThreadingUtilities v0.5.2 [ac1d9e8a] + ThreadsX v0.1.12 [3bb67fe8] + TranscodingStreams v0.11.3 [28d57a85] + Transducers v0.4.84 [592b5752] + Trapz v2.0.3 [d5829a12] + TriangularSolve v0.2.1 [410a4b4d] + Tricks v0.1.10 [781d530d] + TruncatedStacktraces v1.4.0 [3a884ed6] + UnPack v1.0.2 [3d5dd08c] + VectorizationBase v0.21.71 [19fa3120] + VertexSafeGraphs v0.2.0 ⌅ [efce3f68] + WoodburyMatrices v0.5.6 [7bc98958] + Cubature_jll v1.0.5+0 [f5851436] + FFTW_jll v3.3.10+3 [1b77fbbe] + GSL_jll v2.8.0+0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [856f044c] + MKL_jll v2025.0.1+1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 ⌅ [fb77eaff] + Sundials_jll v5.2.3+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 7.36s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 5445.8 ms ✓ ArrayInterface → ArrayInterfaceBandedMatricesExt 5264.6 ms ✓ FiniteDiff → FiniteDiffBandedMatricesExt 2991.3 ms ✓ Transducers → TransducersReferenceablesExt 3073.2 ms ✓ TaylorSeries → TaylorSeriesRATExt 138247.2 ms ✓ LoopVectorization → SpecialFunctionsExt 26788.9 ms ✓ SciMLBase 15100.0 ms ✓ KernelDensity 19991.1 ms ✓ Copulas 12911.3 ms ✓ Optim 36445.9 ms ✓ SparseDiffTools → SparseDiffToolsPolyesterExt 23632.2 ms ✓ FastAlmostBandedMatrices 10055.1 ms ✓ ThreadsX 3858.5 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 76817.5 ms ✓ DiffEqBase 126396.9 ms ✓ LinearSolve 117288.6 ms ✓ GlobalSensitivity 8079.9 ms ✓ DiffEqBase → DiffEqBaseChainRulesCoreExt 83867.8 ms ✓ DiffEqBase → DiffEqBaseDistributionsExt 144923.3 ms ✓ SciMLNLSolve 13880.7 ms ✓ SimpleNonlinearSolve 9359.3 ms ✓ DiffEqCallbacks 27335.5 ms ✓ Sundials 21620.6 ms ✓ JumpProcesses 309883.2 ms ✓ LinearSolve → LinearSolveFastAlmostBandedMatricesExt 14732.6 ms ✓ LinearSolve → LinearSolveRecursiveArrayToolsExt 16783.6 ms ✓ LinearSolve → LinearSolveBandedMatricesExt 130710.8 ms ✓ DiffEqNoiseProcess 26224.9 ms ✓ SteadyStateDiffEq 38784.6 ms ✓ JumpProcesses → JumpProcessFastBroadcastExt 208854.3 ms ✓ NonlinearSolve 29915.4 ms ✓ NonlinearSolve → NonlinearSolveBandedMatricesExt ✗ OrdinaryDiffEq 299499.5 ms ✓ BoundaryValueDiffEq ✗ DelayDiffEq ✗ StochasticDiffEq ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 8 running 0 of 2 signal (10): User defined signal 1 unknown function (ip: 0x7e191c1f5f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#400 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:332 #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_59880.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2290 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#400 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #633 at ./asyncevent.jl:359 jfptr_YY.633_74077.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2290 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (interactive) Task 0x00007e18e43883d0 Total snapshots: 1. Utilization: 0% ╎1 @Base/asyncevent.jl:359 (::Base.var"#633#634"{FileWatching.Pidfile.var"#4#… ╎ 1 @Base/asyncevent.jl:185 _trywait(t::Timer) ╎ 1 @Base/condition.jl:136 wait ╎ 1 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.SpinL… ╎ 1 @Base/task.jl:1199 wait() ╎ 1 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSynchronized{Ta… Thread 2 (default) Task 0x00007e190e200100 Total snapshots: 1. Utilization: 0% ╎1 @Base/Base.jl:352 (::Base.var"#start_profile_listener##0#start_profile_lis… ╎ 1 @Base/Base.jl:332 profile_printing_listener(cond::Base.AsyncCondition) ╎ 1 @Base/asyncevent.jl:185 _trywait(t::Base.AsyncCondition) ╎ 1 @Base/condition.jl:136 wait ╎ 1 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.Spin… ╎ 1 @Base/task.jl:1199 wait() ╎ ╎ 1 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSynchronized{T… ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 2 signal (10): User defined signal 1 unknown function (ip: 0x740c2cf1cf14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#400 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:332 #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_59880.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2290 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 poptask at ./task.jl:1187 wait at ./task.jl:1199 task_done_hook at ./task.jl:839 jfptr_task_done_hook_74867.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2290 [inlined] jl_finish_task at /source/src/task.c:345 start_task at /source/src/task.c:1260 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (interactive) Task 0x0000740c22c71e10 Total snapshots: 1. Utilization: 0% ╎1 @Base/task.jl:839 task_done_hook(t::Task) ╎ 1 @Base/task.jl:1199 wait() ╎ 1 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSynchronized{Task}) Thread 2 (default) Task 0x0000740c1ee00100 Total snapshots: 1. Utilization: 0% ╎1 @Base/Base.jl:352 (::Base.var"#start_profile_listener##0#start_profile_lis… ╎ 1 @Base/Base.jl:332 profile_printing_listener(cond::Base.AsyncCondition) ╎ 1 @Base/asyncevent.jl:185 _trywait(t::Base.AsyncCondition) ╎ 1 @Base/condition.jl:136 wait ╎ 1 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.Spin… ╎ 1 @Base/task.jl:1199 wait() ╎ ╎ 1 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSynchronized{T… [8] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:37 unknown function (ip: 0x7e191c1f5f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 poptask at ./task.jl:1187 wait at ./task.jl:1199 PkgEval terminated after 2745.51s: test duration exceeded the time limit