Package evaluation to test OnlineNMF on Julia 1.12.4 (f5754389fd*) started at 2026-02-02T12:12:42.517 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 5.08s ################################################################################ # Installation # Installing OnlineNMF... Resolving package versions... Installed WebIO ──── v0.8.21 Installed PlotlyJS ─ v0.18.17 Updating `~/.julia/environments/v1.12/Project.toml` [e0c94d91] + OnlineNMF v0.99.6 Updating `~/.julia/environments/v1.12/Manifest.toml` [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [c7e460c6] + ArgParse v1.2.0 [4fba245c] + ArrayInterface v7.22.0 [bf4720bc] + AssetRegistry v0.1.1 [d1d4a3ce] + BitFlags v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [ad839575] + Blink v0.12.9 [2a0fbf3d] + CPUSummary v0.2.7 [336ed68f] + CSV v0.10.15 [fb6a15b2] + CloseOpenIntervals v0.1.13 [944b1d66] + CodecZlib v0.7.8 [6b39b394] + CodecZstd v0.8.7 [35d6a980] + ColorSchemes v3.31.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [f0e56b4a] + ConcurrentUtilities v2.5.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [460bff9d] + ExceptionUnwrapping v0.1.11 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.16.0 [53c48c17] + FixedPointNumbers v0.8.5 [de31a74c] + FunctionalCollections v0.5.0 [38e38edf] + GLM v1.9.2 [f67ccb44] + HDF5 v0.17.2 [cd3eb016] + HTTP v1.10.19 [9fb69e20] + Hiccup v0.2.2 [3e5b6fbb] + HostCPUFeatures v0.1.18 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [97c1335a] + JSExpr v0.5.4 ⌅ [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [50d2b5c4] + Lazy v0.15.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [bdcacae8] + LoopVectorization v0.12.173 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [4d4711f2] + MatrixMarket v0.5.2 [739be429] + MbedTLS v1.1.9 [e1d29d7a] + Missings v1.2.0 [ffc61752] + Mustache v1.0.21 [a975b10e] + Mux v1.0.2 [510215fc] + Observables v0.5.5 [6fe1bfb0] + OffsetArrays v1.17.0 [e0c94d91] + OnlineNMF v0.99.6 [975b03d1] + OnlinePCA v0.3.10 [4d8831e6] + OpenSSL v1.6.1 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [fa939f87] + Pidfile v1.3.0 [a03496cd] + PlotlyBase v0.8.23 [f0f68f2c] + PlotlyJS v0.18.17 [f2990250] + PlotlyKaleido v2.3.1 [1d0040c9] + PolyesterWeave v0.2.2 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.1 [08abe8d2] + PrettyTables v3.1.2 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 [431bcebd] + SciMLPublic v1.0.1 [91c51154] + SentinelArrays v1.4.9 [1277b4bf] + ShiftedArrays v2.0.0 [777ac1f9] + SimpleBufferStream v1.2.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [3eaba693] + StatsModels v0.7.8 [892a3eda] + StringManipulation v0.4.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [b718987f] + TextWrap v1.0.2 [8290d209] + ThreadingUtilities v0.5.5 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [3d5dd08c] + VectorizationBase v0.21.72 [ea10d353] + WeakRefStrings v1.4.2 [0f1e0344] + WebIO v0.8.21 [104b5d7c] + WebSockets v1.6.0 [cc8bc4a8] + Widgets v0.6.7 [76eceee3] + WorkerUtilities v1.6.1 ⌅ [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [f7e6163d] + Kaleido_jll v0.2.1+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.9+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [3161d3a3] + Zstd_jll v1.5.7+1 [477f73a3] + libaec_jll v1.1.5+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building WebIO ───→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/0eef0765186f7452e52236fa42ca8c9b3c11c6e3/build.log` Building PlotlyJS → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/287e092914da6c91f002aafcf82a2ec065bf94a3/build.log` Installation completed after 49.98s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 2687.8 ms ✓ TestEnv 1 dependency successfully precompiled in 3 seconds. 26 already precompiled. Precompiling package dependencies... Precompiling packages... 681.6 ms ✓ LaTeXStrings 536.2 ms ✓ IteratorInterfaceExtensions 626.3 ms ✓ TensorCore 768.2 ms ✓ WorkerUtilities 631.9 ms ✓ StatsAPI 1160.7 ms ✓ OffsetArrays 581.5 ms ✓ UnPack 1321.6 ms ✓ FillArrays 796.7 ms ✓ Statistics 5018.8 ms ✓ MacroTools 1487.8 ms ✓ ManualMemory 1107.6 ms ✓ ShiftedArrays 2532.4 ms ✓ OrderedCollections 2562.8 ms ✓ Observables 981.0 ms ✓ TextWrap 932.7 ms ✓ Requires 607.7 ms ✓ DataValueInterfaces 571.7 ms ✓ Reexport 546.7 ms ✓ SIMDTypes 793.6 ms ✓ DocStringExtensions 1236.4 ms ✓ InlineStrings 3354.0 ms ✓ IrrationalConstants 907.0 ms ✓ URIs 558.6 ms ✓ SimpleBufferStream 578.3 ms ✓ PtrArrays 883.0 ms ✓ TranscodingStreams 689.7 ms ✓ DelimitedFiles 620.3 ms ✓ InvertedIndices 566.0 ms ✓ IfElse 571.3 ms ✓ CommonWorldInvalidations 592.7 ms ✓ DataAPI 3094.1 ms ✓ Crayons 644.4 ms ✓ BitFlags 649.3 ms ✓ SciMLPublic 1334.8 ms ✓ ConcurrentUtilities 1299.6 ms ✓ ProgressMeter 1224.0 ms ✓ PDMats 1389.3 ms ✓ SentinelArrays 771.3 ms ✓ LoggingExtras 1269.0 ms ✓ CpuId 795.4 ms ✓ Preferences 2548.5 ms ✓ Compat 704.7 ms ✓ Pidfile 1037.6 ms ✓ ExceptionUnwrapping 933.4 ms ✓ FunctionalCollections 551.5 ms ✓ TableTraits 986.1 ms ✓ FillArrays → FillArraysSparseArraysExt 4578.3 ms ✓ FixedPointNumbers 885.8 ms ✓ Statistics → SparseArraysExt 610.2 ms ✓ FillArrays → FillArraysStatisticsExt 4288.5 ms ✓ Lazy 997.1 ms ✓ Hiccup 3231.3 ms ✓ ThreadingUtilities 2377.7 ms ✓ DataStructures 682.4 ms ✓ Parameters 1318.6 ms ✓ ArgParse 673.7 ms ✓ Adapt 977.7 ms ✓ LogExpFunctions 691.8 ms ✓ AliasTables 661.0 ms ✓ CodecZlib 725.8 ms ✓ PooledArrays 2377.4 ms ✓ Missings 2980.9 ms ✓ OpenSSL 904.4 ms ✓ FillArrays → FillArraysPDMatsExt 788.2 ms ✓ JLLWrappers 1042.3 ms ✓ MPIPreferences 611.7 ms ✓ PrecompileTools 620.2 ms ✓ Compat → CompatLinearAlgebraExt 2884.2 ms ✓ Tables 3379.5 ms ✓ ColorTypes 769.2 ms ✓ SortingAlgorithms 3262.4 ms ✓ QuadGK 826.5 ms ✓ Adapt → AdaptSparseArraysExt 2619.6 ms ✓ ArrayInterface 618.0 ms ✓ OffsetArrays → OffsetArraysAdaptExt 884.4 ms ✓ MatrixMarket 970.0 ms ✓ Kaleido_jll 948.3 ms ✓ Xorg_libpciaccess_jll 976.1 ms ✓ libaec_jll 986.3 ms ✓ Rmath_jll 965.1 ms ✓ MbedTLS_jll 975.5 ms ✓ Zstd_jll 772.5 ms ✓ MicrosoftMPI_jll 971.9 ms ✓ Libiconv_jll 982.3 ms ✓ OpenSpecFun_jll 2694.9 ms ✓ MPItrampoline_jll 2325.6 ms ✓ StringManipulation 14304.0 ms ✓ Parsers 5074.7 ms ✓ Static 1532.7 ms ✓ FilePathsBase 2670.4 ms ✓ Mustache 4226.0 ms ✓ ColorVectorSpace 797.2 ms ✓ ColorTypes → StyledStringsExt 6147.8 ms ✓ Colors 4704.1 ms ✓ StatsBase 839.9 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 1078.6 ms ✓ Rmath 1425.5 ms ✓ MbedTLS 1360.6 ms ✓ CodecZstd 1002.9 ms ✓ XML2_jll 3798.4 ms ✓ SpecialFunctions 29795.1 ms ✓ PrettyTables 2681.6 ms ✓ JSON 675.6 ms ✓ InlineStrings → ParsersExt 631.8 ms ✓ BitTwiddlingConvenienceFunctions 1708.9 ms ✓ CPUSummary 6090.6 ms ✓ StaticArrayInterface 926.5 ms ✓ FilePathsBase → FilePathsBaseMmapExt 2136.5 ms ✓ FilePathsBase → FilePathsBaseTestExt 1141.4 ms ✓ Widgets 5703.5 ms ✓ ColorSchemes 945.0 ms ✓ PDMats → StatsBaseExt 20974.4 ms ✓ HTTP 1001.6 ms ✓ Hwloc_jll 1455.0 ms ✓ HypergeometricFunctions 864.5 ms ✓ ColorVectorSpace → SpecialFunctionsExt 59890.5 ms ✓ DataFrames 672.7 ms ✓ AssetRegistry 952.2 ms ✓ PlotlyKaleido 1487.3 ms ✓ WeakRefStrings 1298.5 ms ✓ HostCPUFeatures 1167.2 ms ✓ PolyesterWeave 743.5 ms ✓ StaticArrayInterface → StaticArrayInterfaceOffsetArraysExt 771.0 ms ✓ CloseOpenIntervals 885.0 ms ✓ LayoutPointers 7763.6 ms ✓ PlotlyBase 3024.3 ms ✓ WebSockets 2663.7 ms ✓ OpenMPI_jll 2934.4 ms ✓ MPICH_jll 3644.4 ms ✓ StatsFuns 5046.9 ms ✓ Mux 20817.7 ms ✓ CSV 13143.8 ms ✓ VectorizationBase 7665.1 ms ✓ PlotlyBase → DataFramesExt 6745.0 ms ✓ WebIO 3374.4 ms ✓ HDF5_jll 3057.9 ms ✓ StatsModels 6229.9 ms ✓ Distributions 3653.4 ms ✓ SLEEFPirates 4842.6 ms ✓ JSExpr 10932.6 ms ✓ HDF5 2112.0 ms ✓ Distributions → DistributionsTestExt 3521.4 ms ✓ GLM 4342.4 ms ✓ PlotlyBase → DistributionsExt 33693.0 ms ✓ LoopVectorization 8808.0 ms ✓ Blink 3235.1 ms ✓ LoopVectorization → SpecialFunctionsExt 11240.4 ms ✓ PlotlyJS 7691.5 ms ✓ PlotlyJS → CSVExt 10925.5 ms ✓ PlotlyJS → DataFramesExt 9464.6 ms ✓ OnlinePCA 10734.8 ms ✓ OnlineNMF 152 dependencies successfully precompiled in 520 seconds. 39 already precompiled. 1 dependency had output during precompilation: ┌ WebSockets │ WARNING: Imported binding Logging.termlength was undeclared at import time during import to WebSockets. │ WARNING: Imported binding Logging.showvalue was undeclared at import time during import to WebSockets. └ Precompilation completed after 535.77s ################################################################################ # Testing # Testing OnlineNMF Status `/tmp/jl_J4z3uz/Project.toml` [c7e460c6] ArgParse v1.2.0 [6b39b394] CodecZstd v0.8.7 [a93c6f00] DataFrames v1.8.1 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.123 [bdcacae8] LoopVectorization v0.12.173 [4d4711f2] MatrixMarket v0.5.2 [e0c94d91] OnlineNMF v0.99.6 [975b03d1] OnlinePCA v0.3.10 [f0f68f2c] PlotlyJS v0.18.17 [92933f4c] ProgressMeter v1.11.0 [10745b16] Statistics v1.11.1 [37e2e46d] LinearAlgebra v1.12.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.12.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_J4z3uz/Manifest.toml` [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [c7e460c6] ArgParse v1.2.0 [4fba245c] ArrayInterface v7.22.0 [bf4720bc] AssetRegistry v0.1.1 [d1d4a3ce] BitFlags v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [ad839575] Blink v0.12.9 [2a0fbf3d] CPUSummary v0.2.7 [336ed68f] CSV v0.10.15 [fb6a15b2] CloseOpenIntervals v0.1.13 [944b1d66] CodecZlib v0.7.8 [6b39b394] CodecZstd v0.8.7 [35d6a980] ColorSchemes v3.31.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [f0e56b4a] ConcurrentUtilities v2.5.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [460bff9d] ExceptionUnwrapping v0.1.11 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.16.0 [53c48c17] FixedPointNumbers v0.8.5 [de31a74c] FunctionalCollections v0.5.0 [38e38edf] GLM v1.9.2 [f67ccb44] HDF5 v0.17.2 [cd3eb016] HTTP v1.10.19 [9fb69e20] Hiccup v0.2.2 [3e5b6fbb] HostCPUFeatures v0.1.18 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [842dd82b] InlineStrings v1.4.5 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [97c1335a] JSExpr v0.5.4 ⌅ [682c06a0] JSON v0.21.4 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 [50d2b5c4] Lazy v0.15.1 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [bdcacae8] LoopVectorization v0.12.173 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [4d4711f2] MatrixMarket v0.5.2 [739be429] MbedTLS v1.1.9 [e1d29d7a] Missings v1.2.0 [ffc61752] Mustache v1.0.21 [a975b10e] Mux v1.0.2 [510215fc] Observables v0.5.5 [6fe1bfb0] OffsetArrays v1.17.0 [e0c94d91] OnlineNMF v0.99.6 [975b03d1] OnlinePCA v0.3.10 [4d8831e6] OpenSSL v1.6.1 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.37 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [fa939f87] Pidfile v1.3.0 [a03496cd] PlotlyBase v0.8.23 [f0f68f2c] PlotlyJS v0.18.17 [f2990250] PlotlyKaleido v2.3.1 [1d0040c9] PolyesterWeave v0.2.2 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.1 [08abe8d2] PrettyTables v3.1.2 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [94e857df] SIMDTypes v0.1.0 [476501e8] SLEEFPirates v0.6.43 [431bcebd] SciMLPublic v1.0.1 [91c51154] SentinelArrays v1.4.9 [1277b4bf] ShiftedArrays v2.0.0 [777ac1f9] SimpleBufferStream v1.2.0 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [aedffcd0] Static v1.3.1 [0d7ed370] StaticArrayInterface v1.8.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 [4c63d2b9] StatsFuns v1.5.2 [3eaba693] StatsModels v0.7.8 [892a3eda] StringManipulation v0.4.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [62fd8b95] TensorCore v0.1.1 [b718987f] TextWrap v1.0.2 [8290d209] ThreadingUtilities v0.5.5 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.6.1 [3a884ed6] UnPack v1.0.2 [3d5dd08c] VectorizationBase v0.21.72 [ea10d353] WeakRefStrings v1.4.2 [0f1e0344] WebIO v0.8.21 [104b5d7c] WebSockets v1.6.0 [cc8bc4a8] Widgets v0.6.7 [76eceee3] WorkerUtilities v1.6.1 ⌅ [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.2+0 [f7e6163d] Kaleido_jll v0.2.1+0 [94ce4f54] Libiconv_jll v1.18.0+0 [7cb0a576] MPICH_jll v4.3.2+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [c8ffd9c3] MbedTLS_jll v2.28.1010+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.9+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0 [3161d3a3] Zstd_jll v1.5.7+1 [477f73a3] libaec_jll v1.1.5+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.1 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 Running all tests... ####### NMF (Alpha, Julia API) ####### ####### NMF (Beta, Julia API) ####### ####### NMF (Alpha, Command line) ####### Precompiling packages... 919.3 ms ✓ LaTeXStrings 672.9 ms ✓ IteratorInterfaceExtensions 765.2 ms ✓ TensorCore 801.8 ms ✓ WorkerUtilities 631.2 ms ✓ StatsAPI 1612.7 ms ✓ OffsetArrays 594.7 ms ✓ UnPack 1332.1 ms ✓ FillArrays 849.0 ms ✓ Statistics 6849.6 ms ✓ MacroTools 724.3 ms ✓ ManualMemory 748.2 ms ✓ ShiftedArrays 2736.8 ms ✓ OrderedCollections 2437.8 ms ✓ Observables 641.1 ms ✓ TextWrap 1430.6 ms ✓ Requires 577.2 ms ✓ DataValueInterfaces 595.6 ms ✓ Reexport 583.1 ms ✓ SIMDTypes 921.2 ms ✓ DocStringExtensions 1192.4 ms ✓ InlineStrings 4150.1 ms ✓ IrrationalConstants 930.7 ms ✓ URIs 572.7 ms ✓ SimpleBufferStream 623.7 ms ✓ PtrArrays 901.7 ms ✓ TranscodingStreams 712.6 ms ✓ DelimitedFiles 632.2 ms ✓ InvertedIndices 578.6 ms ✓ IfElse 585.0 ms ✓ CommonWorldInvalidations 630.2 ms ✓ DataAPI 3681.2 ms ✓ Crayons 659.1 ms ✓ BitFlags 795.1 ms ✓ SciMLPublic 1343.3 ms ✓ ConcurrentUtilities 1355.0 ms ✓ ProgressMeter 1260.2 ms ✓ PDMats 2473.4 ms ✓ SentinelArrays 768.5 ms ✓ LoggingExtras 1293.0 ms ✓ CpuId 1044.2 ms ✓ Preferences 2426.3 ms ✓ Compat 733.7 ms ✓ Pidfile 1109.0 ms ✓ ExceptionUnwrapping 957.3 ms ✓ FunctionalCollections 571.2 ms ✓ TableTraits 998.1 ms ✓ FillArrays → FillArraysSparseArraysExt 7121.6 ms ✓ FixedPointNumbers 1065.3 ms ✓ Statistics → SparseArraysExt 647.2 ms ✓ FillArrays → FillArraysStatisticsExt 4086.9 ms ✓ Lazy 1041.3 ms ✓ Hiccup 3259.8 ms ✓ ThreadingUtilities 2431.8 ms ✓ DataStructures 711.1 ms ✓ Parameters 1535.1 ms ✓ ArgParse 706.7 ms ✓ Adapt 977.6 ms ✓ LogExpFunctions 714.4 ms ✓ AliasTables 704.0 ms ✓ CodecZlib 746.5 ms ✓ PooledArrays 2327.1 ms ✓ Missings 3471.1 ms ✓ OpenSSL 936.9 ms ✓ FillArrays → FillArraysPDMatsExt 827.4 ms ✓ JLLWrappers 958.4 ms ✓ MPIPreferences 641.5 ms ✓ PrecompileTools 673.3 ms ✓ Compat → CompatLinearAlgebraExt 2884.5 ms ✓ Tables 3572.8 ms ✓ ColorTypes 804.4 ms ✓ SortingAlgorithms 3121.8 ms ✓ QuadGK 859.3 ms ✓ Adapt → AdaptSparseArraysExt 2480.7 ms ✓ ArrayInterface 650.8 ms ✓ OffsetArrays → OffsetArraysAdaptExt 919.0 ms ✓ MatrixMarket 1027.2 ms ✓ Kaleido_jll 1064.2 ms ✓ Xorg_libpciaccess_jll 1150.1 ms ✓ libaec_jll 1038.2 ms ✓ Rmath_jll 1189.8 ms ✓ MbedTLS_jll 1114.8 ms ✓ Zstd_jll 851.4 ms ✓ MicrosoftMPI_jll 1107.5 ms ✓ Libiconv_jll 1066.7 ms ✓ OpenSpecFun_jll 2836.3 ms ✓ MPItrampoline_jll 3769.8 ms ✓ StringManipulation 31604.4 ms ✓ Parsers 6855.7 ms ✓ Static 1561.5 ms ✓ FilePathsBase 2624.5 ms ✓ Mustache 5738.8 ms ✓ ColorVectorSpace 833.2 ms ✓ ColorTypes → StyledStringsExt 9859.0 ms ✓ Colors 4943.1 ms ✓ StatsBase 875.7 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 1140.8 ms ✓ Rmath 1762.0 ms ✓ MbedTLS 1424.1 ms ✓ CodecZstd 1155.6 ms ✓ XML2_jll 4179.4 ms ✓ SpecialFunctions 75966.5 ms ✓ PrettyTables 3085.9 ms ✓ JSON 1230.1 ms ✓ InlineStrings → ParsersExt 1122.8 ms ✓ BitTwiddlingConvenienceFunctions 1976.4 ms ✓ CPUSummary 31299.9 ms ✓ StaticArrayInterface 794.5 ms ✓ FilePathsBase → FilePathsBaseMmapExt 2058.6 ms ✓ FilePathsBase → FilePathsBaseTestExt 1181.0 ms ✓ Widgets 5837.0 ms ✓ ColorSchemes 1022.3 ms ✓ PDMats → StatsBaseExt 42071.7 ms ✓ HTTP 1075.4 ms ✓ Hwloc_jll 1466.0 ms ✓ HypergeometricFunctions 877.4 ms ✓ ColorVectorSpace → SpecialFunctionsExt 123441.2 ms ✓ DataFrames 722.6 ms ✓ AssetRegistry 1080.9 ms ✓ PlotlyKaleido 1432.7 ms ✓ WeakRefStrings 1581.3 ms ✓ HostCPUFeatures 1157.3 ms ✓ PolyesterWeave 772.1 ms ✓ StaticArrayInterface → StaticArrayInterfaceOffsetArraysExt 768.1 ms ✓ CloseOpenIntervals 900.9 ms ✓ LayoutPointers 7657.7 ms ✓ PlotlyBase 2637.5 ms ✓ WebSockets 2976.3 ms ✓ OpenMPI_jll 3137.5 ms ✓ MPICH_jll 4352.0 ms ✓ StatsFuns 4770.5 ms ✓ Mux 39612.7 ms ✓ CSV 17016.4 ms ✓ VectorizationBase 8415.2 ms ✓ PlotlyBase → DataFramesExt 6919.1 ms ✓ WebIO 4540.6 ms ✓ HDF5_jll 3025.5 ms ✓ StatsModels 6616.1 ms ✓ Distributions 3150.7 ms ✓ SLEEFPirates 4543.8 ms ✓ JSExpr 16218.8 ms ✓ HDF5 2209.6 ms ✓ Distributions → DistributionsTestExt 3209.3 ms ✓ GLM 5029.1 ms ✓ PlotlyBase → DistributionsExt 68909.7 ms ✓ LoopVectorization 8116.0 ms ✓ Blink 1719.7 ms ✓ LoopVectorization → SpecialFunctionsExt 10631.3 ms ✓ PlotlyJS 6715.3 ms ✓ PlotlyJS → CSVExt 9680.3 ms ✓ PlotlyJS → DataFramesExt 8702.6 ms ✓ OnlinePCA 2987.4 ms ✓ OnlineNMF 152 dependencies successfully precompiled in 768 seconds. 39 already precompiled. 1 dependency had output during precompilation: ┌ WebSockets │ WARNING: Imported binding Logging.termlength was undeclared at import time during import to WebSockets. │ WARNING: Imported binding Logging.showvalue was undeclared at import time during import to WebSockets. └ Parsed args: logdir => "/tmp/jl_SDhdaF" upper => 1.0f38 l1u => 1.1920929f-7 outdir => "/tmp/jl_SDhdaF" lower => 0 initV => nothing initL => nothing l1v => 1.1920929f-7 alpha => "1" l2v => 1.1920929f-7 algorithm => "alpha" input => "/tmp/jl_SDhdaF/Data.zst" l2u => 1.1920929f-7 numepoch => 5 beta => 2 initU => nothing graphv => 1.1920929f-7 dim => "3" chunksize => "51" Progress: 40%|████████████████▍ | ETA: 0:00:01 Progress: 60%|████████████████████████▋ | ETA: 0:00:01 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 ####### NMF (Beta, Command line) ####### Parsed args: logdir => "/tmp/jl_SDhdaF" upper => 1.0f38 l1u => 1.1920929f-7 outdir => "/tmp/jl_SDhdaF" lower => 0 initV => nothing initL => nothing l1v => 1.1920929f-7 alpha => 1 l2v => 1.1920929f-7 algorithm => "beta" input => "/tmp/jl_SDhdaF/Data.zst" l2u => 1.1920929f-7 numepoch => 5 beta => "2" initU => nothing graphv => 1.1920929f-7 dim => "3" chunksize => "51" Progress: 40%|████████████████▍ | ETA: 0:00:01 Progress: 60%|████████████████████████▋ | ETA: 0:00:01 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 ####### DNMF (Julia API) ####### ####### DNMF (Command line) ####### Parsed args: chunksize => "51" terv => 1.1920929f-7 binu => 1.1920929f-7 logdir => "/tmp/jl_SDhdaF" upper => 1.0f38 l1u => 1.1920929f-7 binv => 1.1920929f-7 outdir => "/tmp/jl_SDhdaF" lower => 0 initV => nothing initL => nothing l1v => 1.1920929f-7 l2v => 1.1920929f-7 input => "/tmp/jl_SDhdaF/Data.zst" l2u => 1.1920929f-7 numepoch => 5 beta => "2" initU => nothing graphv => 1.1920929f-7 dim => "3" teru => 1.1920929f-7 Progress: 40%|████████████████▍ | ETA: 0:00:01 Progress: 60%|████████████████████████▋ | ETA: 0:00:01 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 ####### Sparse-NMF (Alpha, Julia API) ####### Progress: 40%|████████████████▍ | ETA: 0:00:01 Progress: 60%|████████████████████████▋ | ETA: 0:00:01 Progress: 100%|█████████████████████████████████████████| Time: 0:00:00 ####### Sparse-NMF (Beta, Julia API) ####### ####### Sparse-NMF (Alpha, Command line) ####### Parsed args: logdir => "/tmp/jl_SDhdaF" upper => 1.0f38 l1u => 1.1920929f-7 outdir => "/tmp/jl_SDhdaF" lower => 0 initV => nothing initL => nothing l1v => 1.1920929f-7 alpha => "1" l2v => 1.1920929f-7 algorithm => "alpha" input => "/tmp/jl_SDhdaF/Data.mtx.zst" l2u => 1.1920929f-7 numepoch => 5 beta => 2 initU => nothing graphv => 1.1920929f-7 dim => "3" chunksize => "51" Progress: 40%|████████████████▍ | ETA: 0:00:01 Progress: 60%|████████████████████████▋ | ETA: 0:00:01 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 ####### Sparse-NMF (Beta, Command line) ####### Parsed args: logdir => "/tmp/jl_SDhdaF" upper => 1.0f38 l1u => 1.1920929f-7 outdir => "/tmp/jl_SDhdaF" lower => 0 initV => nothing initL => nothing l1v => 1.1920929f-7 alpha => 1 l2v => 1.1920929f-7 algorithm => "beta" input => "/tmp/jl_SDhdaF/Data.mtx.zst" l2u => 1.1920929f-7 numepoch => 5 beta => "2" initU => nothing graphv => 1.1920929f-7 dim => "3" chunksize => "51" Progress: 40%|████████████████▍ | ETA: 0:00:01 Progress: 60%|████████████████████████▋ | ETA: 0:00:01 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 ####### Sparse-DNMF (Julia API) ####### ####### Sparse-DNMF (Command line) ####### Parsed args: chunksize => "51" terv => 1.1920929f-7 binu => 1.1920929f-7 logdir => "/tmp/jl_SDhdaF" upper => 1.0f38 l1u => 1.1920929f-7 binv => 1.1920929f-7 outdir => "/tmp/jl_SDhdaF" lower => 0 initV => nothing initL => nothing l1v => 1.1920929f-7 l2v => 1.1920929f-7 input => "/tmp/jl_SDhdaF/Data.mtx.zst" l2u => 1.1920929f-7 numepoch => 5 beta => "2" initU => nothing graphv => 1.1920929f-7 dim => "3" teru => 1.1920929f-7 Progress: 40%|████████████████▍ | ETA: 0:00:02 Progress: 60%|████████████████████████▋ | ETA: 0:00:01 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 Progress: 60%|████████████████████████▋ | ETA: 0:00:00 Progress: 100%|█████████████████████████████████████████| Time: 0:00:00 ####### BinCOO-NMF (Alpha, Julia API) ####### Progress: 40%|████████████████▍ | ETA: 0:00:00 Progress: 100%|█████████████████████████████████████████| Time: 0:00:00 ####### BinCOO-NMF (Beta, Julia API) ####### ####### BinCOO-NMF (Alpha, Command line) ####### Parsed args: logdir => "/tmp/jl_SDhdaF" upper => 1.0f38 l1u => 1.1920929f-7 outdir => "/tmp/jl_SDhdaF" lower => 0 initV => nothing initL => nothing l1v => 1.1920929f-7 alpha => "1" l2v => 1.1920929f-7 algorithm => "alpha" input => "/tmp/jl_SDhdaF/Data.bincoo.zst" l2u => 1.1920929f-7 numepoch => 5 beta => 2 initU => nothing graphv => 1.1920929f-7 dim => "3" chunksize => "51" Progress: 40%|████████████████▍ | ETA: 0:00:01 Progress: 60%|████████████████████████▋ | ETA: 0:00:01 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 ####### BinCOO-NMF (Beta, Command line) ####### Parsed args: logdir => "/tmp/jl_SDhdaF" upper => 1.0f38 l1u => 1.1920929f-7 outdir => "/tmp/jl_SDhdaF" lower => 0 initV => nothing initL => nothing l1v => 1.1920929f-7 alpha => 1 l2v => 1.1920929f-7 algorithm => "beta" input => "/tmp/jl_SDhdaF/Data.bincoo.zst" l2u => 1.1920929f-7 numepoch => 5 beta => "2" initU => nothing graphv => 1.1920929f-7 dim => "3" chunksize => "51" Progress: 40%|████████████████▍ | ETA: 0:00:01 Progress: 60%|████████████████████████▋ | ETA: 0:00:01 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 ####### BinCOO-DNMF (Julia API) ####### ####### BinCOO-DNMF (Command line) ####### Parsed args: chunksize => "51" terv => 1.1920929f-7 binu => 1.1920929f-7 logdir => "/tmp/jl_SDhdaF" upper => 1.0f38 l1u => 1.1920929f-7 binv => 1.1920929f-7 outdir => "/tmp/jl_SDhdaF" lower => 0 initV => nothing initL => nothing l1v => 1.1920929f-7 l2v => 1.1920929f-7 input => "/tmp/jl_SDhdaF/Data.bincoo.zst" l2u => 1.1920929f-7 numepoch => 5 beta => "2" initU => nothing graphv => 1.1920929f-7 dim => "3" teru => 1.1920929f-7 Progress: 40%|████████████████▍ | ETA: 0:00:01 Progress: 60%|████████████████████████▋ | ETA: 0:00:01 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 All tests completed. Testing OnlineNMF tests passed Testing completed after 1329.03s PkgEval succeeded after 1935.21s