Package evaluation of Taxonomy on Julia 1.13.0-DEV.896 (efa4faf9a4*) started at 2025-07-25T11:16:24.165 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 13.27s ################################################################################ # Installation # Installing Taxonomy... Resolving package versions... Installed StatsAPI ─────────── v1.7.1 Installed DataAPI ──────────── v1.16.0 Installed OrderedCollections ─ v1.8.1 Installed StringDistances ──── v0.11.3 Installed Statistics ───────── v1.11.1 Installed Taxonomy ─────────── v0.4.6 Installed AbstractTrees ────── v0.4.5 Installed Distances ────────── v0.10.12 Updating `~/.julia/environments/v1.13/Project.toml` [10bb16a4] + Taxonomy v0.4.6 Updating `~/.julia/environments/v1.13/Manifest.toml` [1520ce14] + AbstractTrees v0.4.5 [9a962f9c] + DataAPI v1.16.0 [b4f34e82] + Distances v0.10.12 [bac558e1] + OrderedCollections v1.8.1 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [88034a9c] + StringDistances v0.11.3 [10bb16a4] + Taxonomy v0.4.6 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [d6f4376e] + Markdown v1.11.0 [f489334b] + StyledStrings v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [8e850b90] + libblastrampoline_jll v5.13.1+0 Installation completed after 1.45s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 3460.0 ms ✓ TestEnv 1 dependency successfully precompiled in 4 seconds. 26 already precompiled. Precompiling package dependencies... Precompilation completed after 36.03s ################################################################################ # Testing # Testing Taxonomy Status `/tmp/jl_rWb0W1/Project.toml` [1520ce14] AbstractTrees v0.4.5 [944b1d66] CodecZlib v0.7.8 [9a962f9c] DataAPI v1.16.0 [bac558e1] OrderedCollections v1.8.1 [88034a9c] StringDistances v0.11.3 [10bb16a4] Taxonomy v0.4.6 [f43a241f] Downloads v1.7.0 [b77e0a4c] InteractiveUtils v1.11.0 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_rWb0W1/Manifest.toml` [1520ce14] AbstractTrees v0.4.5 [944b1d66] CodecZlib v0.7.8 [9a962f9c] DataAPI v1.16.0 [b4f34e82] Distances v0.10.12 [bac558e1] OrderedCollections v1.8.1 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [88034a9c] StringDistances v0.11.3 [10bb16a4] Taxonomy v0.4.6 [3bb67fe8] TranscodingStreams v0.11.3 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [f489334b] StyledStrings v1.11.0 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.14.1+1 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.7.15 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 Testing Running tests... Test Summary: | Pass Total Time database.jl | 3 3 20.0s taxon.jl: Error During Test at /home/pkgeval/.julia/packages/Taxonomy/9q2ts/test/runtests.jl:38 Test threw exception Expression: #= /home/pkgeval/.julia/packages/Taxonomy/9q2ts/test/runtests.jl:38 =# @inferred(name2taxids("Homo", db)) == [9605] return type Vector{Int64} does not match inferred return type Any Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] top-level scope @ ~/.julia/packages/Taxonomy/9q2ts/test/runtests.jl:31 [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1858 [inlined] [4] macro expansion @ ~/.julia/packages/Taxonomy/9q2ts/test/runtests.jl:38 [inlined] [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:738 [inlined] taxon.jl: Error During Test at /home/pkgeval/.julia/packages/Taxonomy/9q2ts/test/runtests.jl:39 Test threw exception Expression: #= /home/pkgeval/.julia/packages/Taxonomy/9q2ts/test/runtests.jl:39 =# @inferred(name2taxids("Homo")) == [9605] return type Vector{Int64} does not match inferred return type Any Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] top-level scope @ ~/.julia/packages/Taxonomy/9q2ts/test/runtests.jl:31 [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1858 [inlined] [4] macro expansion @ ~/.julia/packages/Taxonomy/9q2ts/test/runtests.jl:39 [inlined] [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:738 [inlined] taxon.jl: Error During Test at /home/pkgeval/.julia/packages/Taxonomy/9q2ts/test/runtests.jl:47 Test threw exception Expression: #= /home/pkgeval/.julia/packages/Taxonomy/9q2ts/test/runtests.jl:47 =# @inferred(Nothing, AbstractTrees.parent(human)) == Taxon(9605, db) return type Taxon does not match inferred return type Any Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] top-level scope @ ~/.julia/packages/Taxonomy/9q2ts/test/runtests.jl:31 [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1858 [inlined] [4] macro expansion @ ~/.julia/packages/Taxonomy/9q2ts/test/runtests.jl:47 [inlined] [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:738 [inlined] Test Summary: | Pass Error Total Time taxon.jl | 20 3 23 25.7s RNG of the outermost testset: Random.Xoshiro(0xcc6ba7abe69d53c9, 0x20bb91bdd8144db4, 0x58b54b03312de7c7, 0x0d293f647c1721bf, 0x46498fb4c961b001) ERROR: LoadError: Some tests did not pass: 20 passed, 0 failed, 3 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/Taxonomy/9q2ts/test/runtests.jl:30 Testing failed after 91.16s ERROR: LoadError: Package Taxonomy errored during testing Stacktrace: [1] pkgerror(::String, ::Vararg{String}) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2661 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2510 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [7] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:311 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:320 [12] _start() @ Base ./client.jl:553 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 159.02s: package tests unexpectedly errored