Package evaluation of GeoStatsTransforms on Julia 1.12.0-DEV.2007 (ebef610801*) started at 2025-02-14T07:32:58.451 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 7.32s ################################################################################ # Installation # Installing GeoStatsTransforms... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [725d9659] + GeoStatsTransforms v0.11.1 Updating `~/.julia/environments/v1.12/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.41 [79e6a3ab] + Adapt v4.1.1 [35492f91] + AdaptivePredicates v1.2.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.18.0 [a9b6321e] + Atomix v1.1.0 [39de3d68] + AxisArrays v0.4.7 [198e06fe] + BangBang v0.4.3 [0e736298] + Bessels v0.2.8 [fa961155] + CEnum v0.5.0 [324d7699] + CategoricalArrays v0.10.8 [082447d4] + ChainRules v1.72.2 [d360d2e6] + ChainRulesCore v1.25.1 [ae650224] + ChunkSplitters v3.1.1 [7a955b69] + CircularArrays v1.4.0 [aaaa29a8] + Clustering v0.15.8 [5900dafe] + CoDa v1.4.0 [35d6a980] + ColorSchemes v3.29.0 [3da002f7] + ColorTypes v0.12.0 [c3611d14] + ColorVectorSpace v0.11.0 [03fe91ce] + Colorfy v1.1.0 [5ae59095] + Colors v0.13.0 [9cc86067] + ColumnSelectors v1.0.0 [861a8166] + Combinatorics v1.0.2 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.5.8 [b46f11dc] + CoordRefSystems v0.16.9 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [6cb2f572] + DataScienceTraits v1.0.1 [864edb3b] + DataStructures v0.18.20 [e2d170a0] + DataValueInterfaces v1.0.0 [927a84f5] + DelaunayTriangulation v1.6.4 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.117 [ffbed154] + DocStringExtensions v0.9.3 [4e289a0a] + EnumX v1.0.4 [429591f6] + ExactPredicates v2.2.8 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [53c48c17] + FixedPointNumbers v0.8.5 [f6369f11] + ForwardDiff v0.10.38 [0c68f7d7] + GPUArrays v11.2.2 [46192b85] + GPUArraysCore v0.2.0 [6771c435] + GeoStatsFunctions v0.10.5 [ad987403] + GeoStatsModels v0.9.4 [725d9659] + GeoStatsTransforms v0.11.1 [e502b557] + GeoTables v1.24.10 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.27 [7869d1d1] + IRTools v0.4.14 [615f187c] + IfElse v0.1.1 [22cec73e] + InitialValues v0.3.1 [d1acc4aa] + IntervalArithmetic v0.22.23 [8197267c] + IntervalSets v0.7.10 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [63c18a36] + KernelAbstractions v0.9.33 [929cbde3] + LLVM v9.2.0 [b964fa9f] + LaTeXStrings v1.4.0 [d3d80556] + LineSearches v7.3.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.15 [eacbb407] + Meshes v0.52.15 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.8.3 [77ba4419] + NaNMath v1.1.2 [b8a86587] + NearestNeighbors v0.4.21 [2f6b4ddb] + NelderMead v0.4.0 [6fe1bfb0] + OffsetArrays v1.15.0 [67456a42] + OhMyThreads v0.7.0 [429524aa] + Optim v1.11.0 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.32 [d96e819e] + Parameters v0.12.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [94ee1d12] + Quaternions v0.7.6 [b3c3ace0] + RangeArrays v0.3.2 [c1ae055f] + RealDot v0.1.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.0 [79098fc4] + Rmath v0.8.0 [6038ab10] + Rotations v1.7.1 [5eaf0fd0] + RoundingEmulator v0.2.1 [7e506255] + ScopedValues v1.3.0 [efcf1570] + Setfield v1.1.1 [a2af1166] + SortingAlgorithms v1.2.1 [dc90abb0] + SparseInverseSubset v0.1.2 [276daf66] + SpecialFunctions v2.5.0 [91464d47] + StableTasks v0.1.5 [aedffcd0] + Static v1.1.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.12 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.3.2 [892a3eda] + StringManipulation v0.4.1 ⌃ [09ab397b] + StructArrays v0.6.21 [e5d66e97] + TableDistances v1.0.0 [3783bdb8] + TableTraits v1.0.1 [0d432bfd] + TableTransforms v1.33.10 [bd369af6] + Tables v1.12.0 [ed4db957] + TaskLocalValues v0.1.2 [62fd8b95] + TensorCore v0.1.1 [06e1c1a7] + TiledIteration v0.5.0 [28dd2a49] + TransformsBase v1.6.0 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.22.0 [013be700] + UnsafeAtomics v0.3.0 [e88e6eb3] + Zygote v0.7.4 [700de1a5] + ZygoteRules v0.2.7 [4e9b3aee] + CRlibm_jll v1.0.1+0 [dad2f222] + LLVMExtra_jll v0.0.35+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ have new versions available and may be upgradable. Installation completed after 6.18s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 18 running 0 of 2 signal (10): User defined signal 1 unknown function (ip: 0x7a19a2685f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:333 #start_profile_listener##0 at ./Base.jl:353 jfptr_YY.start_profile_listenerYY.YY.0_55617.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2300 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 [inlined] success at ./process.jl:556 jfptr_success_51555.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 #compilecache#886 at ./loading.jl:3213 compilecache at ./loading.jl:3169 [inlined] #_precompilepkgs##55 at ./precompilation.jl:956 with_logstate at ./logging/logging.jl:534 with_logger at ./logging/logging.jl:644 [inlined] #_precompilepkgs##53 at ./precompilation.jl:950 [inlined] #mkpidlock#8 at /source/usr/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 jfptr_YY.mkpidlockYY.8_50171.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 mkpidlock at /source/usr/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:90 #mkpidlock#7 at /source/usr/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] mkpidlock at /source/usr/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 jfptr_mkpidlock_111501.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2300 [inlined] do_apply at /source/src/builtins.c:839 #trymkpidlock#13 at /source/usr/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2300 [inlined] do_apply at /source/src/builtins.c:839 trymkpidlock at /source/usr/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:112 _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2300 [inlined] do_apply at /source/src/builtins.c:839 apply_gr_kw at ./reflection.jl:1280 _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2300 [inlined] jl_f__call_latest at /source/src/builtins.c:883 #invokelatest_gr#227 at ./reflection.jl:1288 [inlined] invokelatest_gr at ./reflection.jl:1282 [inlined] precompile_pkgs_maybe_cachefile_lock at ./precompilation.jl:1147 jfptr_precompile_pkgs_maybe_cachefile_lock_61814.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 macro expansion at ./timing.jl:461 [inlined] #_precompilepkgs##47 at ./precompilation.jl:949 unknown function (ip: 0x7a1998a27193) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2300 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 2 signal (10): User defined signal 1 unknown function (ip: 0x7b515f9cdf14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:333 #start_profile_listener##0 at ./Base.jl:353 jfptr_YY.start_profile_listenerYY.YY.0_55617.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2300 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 poptask at ./task.jl:1187 wait at ./task.jl:1199 task_done_hook at ./task.jl:839 jfptr_task_done_hook_69996.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2300 [inlined] jl_finish_task at /source/src/task.c:345 start_task at /source/src/task.c:1260 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (interactive) Task 0x00007a199656efe0 Total snapshots: 1. Utilization: 0% ╎1 @Base/precompilation.jl:949 (::Base.Precompilation.var"#_precompilepkgs##4… ╎ 1 @Base/timing.jl:461 macro expansion ╎ 1 @Base/precompilation.jl:1147 precompile_pkgs_maybe_cachefile_lock(f::Bas… ╎ 1 @Base/reflection.jl:1282 invokelatest_gr ╎ 1 @Base/reflection.jl:1288 #invokelatest_gr#227 ╎ 1 @Base/reflection.jl:1280 apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any… ╎ ╎ 1 @FileWatching/…file.jl:112 kwcall(::@NamedTuple{stale_age::Int64}, :… ╎ ╎ 1 @FileWatching/…file.jl:114 trymkpidlock(::Function, ::Vararg{Any}; … ╎ ╎ 1 @FileWatching/…file.jl:88 kwcall(::@NamedTuple{stale_age::Int64, w… ╎ ╎ 1 @FileWatching/…file.jl:88 #mkpidlock#7 ╎ ╎ 1 @FileWatching/…ile.jl:90 kwcall(::@NamedTuple{stale_age::Int64, … ╎ ╎ ╎ 1 @FileWatching/…ile.jl:93 mkpidlock(f::Base.Precompilation.var"#… ╎ ╎ ╎ 1 @Base/…ompilation.jl:950 #_precompilepkgs##53 ╎ ╎ ╎ 1 @Base/…ng/logging.jl:644 with_logger ╎ ╎ ╎ 1 @Base/…g/logging.jl:534 with_logstate(f::Base.Precompilation… ╎ ╎ ╎ 1 @Base/…mpilation.jl:956 (::Base.Precompilation.var"#_precom… ╎ ╎ ╎ ╎ 1 @Base/loading.jl:3169 compilecache ╎ ╎ ╎ ╎ 1 @Base/loading.jl:3213 compilecache(pkg::Base.PkgId, path:… ╎ ╎ ╎ ╎ 1 @Base/process.jl:556 success(x::Base.Process) ╎ ╎ ╎ ╎ 1 @Base/process.jl:687 wait ╎ ╎ ╎ ╎ 1 @Base/process.jl:694 wait(x::Base.Process, syncd::Bool) ╎ ╎ ╎ ╎ ╎ 1 @Base/…dition.jl:136 wait ╎ ╎ ╎ ╎ ╎ 1 @Base/…dition.jl:141 wait(c::Base.GenericCondition{B… ╎ ╎ ╎ ╎ ╎ 1 @Base/task.jl:1199 wait() ╎ ╎ ╎ ╎ ╎ 1 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinked… Thread 2 (default) Task 0x00007a1994a00100 Total snapshots: 1. Utilization: 0% ╎1 @Base/Base.jl:353 (::Base.var"#start_profile_listener##0#start_profile_lis… ╎ 1 @Base/Base.jl:333 profile_printing_listener(cond::Base.AsyncCondition) ╎ 1 @Base/asyncevent.jl:185 _trywait(t::Base.AsyncCondition) ╎ 1 @Base/condition.jl:136 wait ╎ 1 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.Spin… ╎ 1 @Base/task.jl:1199 wait() ╎ ╎ 1 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSynchronized{T… ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (interactive) Task 0x00007b5115d14c40 Total snapshots: 1. Utilization: 0% ╎1 @Base/task.jl:839 task_done_hook(t::Task) ╎ 1 @Base/task.jl:1199 wait() ╎ 1 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSynchronized{Task}) Thread 2 (default) Task 0x00007b5151c00100 Total snapshots: 1. Utilization: 0% ╎1 @Base/Base.jl:353 (::Base.var"#start_profile_listener##0#start_profile_lis… ╎ 1 @Base/Base.jl:333 profile_printing_listener(cond::Base.AsyncCondition) ╎ 1 @Base/asyncevent.jl:185 _trywait(t::Base.AsyncCondition) ╎ 1 @Base/condition.jl:136 wait ╎ 1 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.Spin… ╎ 1 @Base/task.jl:1199 wait() ╎ ╎ 1 @Base/task.jl:1187 poptask(W::Base.IntrusiveLinkedListSynchronized{T… [18] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:37 unknown function (ip: 0x7a19a2685f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 poptask at ./task.jl:1187 wait at ./task.jl:1199 PkgEval terminated after 2736.46s: test duration exceeded the time limit