Package evaluation of NeXLParticle on Julia 1.13.0-DEV.123 (e910e6fb06*) started at 2025-03-02T04:08:18.181 ################################################################################ # Set-up # Set-up completed after 0.27s ################################################################################ # Installation # Installing NeXLParticle... Resolving package versions... Installed HDF5 ─── v0.16.16 Installed CRlibm ─ v0.8.0 Updating `~/.julia/environments/v1.13/Project.toml` [9f92fee6] + NeXLParticle v0.1.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [7f219486] + AbstractNFFTs v0.8.2 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.2.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.4.0 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.18.0 ⌃ [13072b0f] + AxisAlgorithms v1.0.1 [39de3d68] + AxisArrays v0.4.7 [198e06fe] + BangBang v0.4.4 [9718e550] + Baselet v0.1.1 [26cce99e] + BasicInterpolators v0.7.1 [d1d4a3ce] + BitFlags v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [fe54227b] + BoteSalvatICX v2.0.2 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.6 ⌅ [96374032] + CRlibm v0.8.0 [336ed68f] + CSV v0.10.15 [49dc2e85] + Calculus v0.5.2 [aafaddc9] + CatIndices v0.2.2 [324d7699] + CategoricalArrays v0.10.8 [d360d2e6] + ChainRulesCore v1.25.1 [fb6a15b2] + CloseOpenIntervals v0.1.13 [aaaa29a8] + Clustering v0.15.8 [944b1d66] + CodecZlib v0.7.8 ⌃ [35d6a980] + ColorSchemes v3.26.0 ⌅ [3da002f7] + ColorTypes v0.11.5 ⌅ [c3611d14] + ColorVectorSpace v0.9.10 ⌅ [5ae59095] + Colors v0.12.11 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.16.0 [a81c6b42] + Compose v0.9.5 [a33af91c] + CompositionsBase v0.1.2 [ed09eef8] + ComputationalResources v0.3.2 [5060bff5] + ConcurrentCollections v0.1.1 [f0e56b4a] + ConcurrentUtilities v2.5.0 [187b0558] + ConstructionBase v1.5.8 [6add18c4] + ContextVariablesX v0.1.3 [150eb455] + CoordinateTransformations v0.6.4 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9c784101] + CubicSplines v0.2.1 [dc8bdbbb] + CustomUnitRanges v1.0.2 [a10d1c49] + DBInterface v2.6.1 [9a962f9c] + DataAPI v1.16.0 [124859b0] + DataDeps v0.7.13 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.20 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [39dd38d3] + Dierckx v0.5.4 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.117 [ffbed154] + DocStringExtensions v0.9.3 [90fa49ef] + ErrorfreeArithmetic v0.5.2 [460bff9d] + ExceptionUnwrapping v0.1.11 [e2ba6199] + ExprTools v0.1.10 [411431e0] + Extents v0.1.5 [8f5d6c58] + EzXML v1.2.0 [4f61f5a4] + FFTViews v0.3.2 [7a1cc6ca] + FFTW v1.8.1 [cc61a311] + FLoops v0.2.2 [b9860ae5] + FLoopsBase v0.1.1 ⌅ [fa42c844] + FastRounding v0.2.0 [5789e2e9] + FileIO v1.17.0 [48062228] + FilePathsBase v0.9.23 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [53c48c17] + FixedPointNumbers v0.8.5 [59287772] + Formatting v0.4.3 [f6369f11] + ForwardDiff v0.10.38 [b18b359b] + FourierTools v0.4.8 [68eda718] + GeoFormatTypes v0.4.4 [cf35fbd7] + GeoInterface v1.4.1 ⌅ [5c1252a2] + GeometryBasics v0.4.11 [a2bd30eb] + Graphics v1.1.3 [86223c79] + Graphs v1.12.0 ⌅ [f67ccb44] + HDF5 v0.16.16 [cd3eb016] + HTTP v1.10.15 [3e5b6fbb] + HostCPUFeatures v0.1.17 [34004b35] + HypergeometricFunctions v0.3.27 [615f187c] + IfElse v0.1.1 ⌃ [2803e5a7] + ImageAxes v0.6.11 ⌃ [c817782e] + ImageBase v0.1.5 [f332f351] + ImageContrastAdjustment v0.3.12 ⌅ [a09fc81d] + ImageCore v0.9.4 [51556ac3] + ImageDistances v0.2.17 ⌃ [6a3955dd] + ImageFiltering v0.7.6 ⌃ [82e4d734] + ImageIO v0.6.8 ⌃ [6218d12a] + ImageMagick v1.2.1 ⌃ [bc367c6b] + ImageMetadata v0.9.9 ⌅ [787d08f9] + ImageMorphology v0.3.2 [2996bd0c] + ImageQualityIndexes v0.3.7 ⌃ [80713f31] + ImageSegmentation v1.8.1 [4e3cecfd] + ImageShow v0.3.8 ⌅ [02fcd773] + ImageTransformations v0.9.5 ⌅ [916415d5] + Images v0.25.3 [613c443e] + IndexFunArrays v0.2.7 [9b13fd28] + IndirectArrays v1.0.0 [d25df0c9] + Inflate v0.1.5 [22cec73e] + InitialValues v0.3.1 [842dd82b] + InlineStrings v1.4.3 [1d092043] + IntegralArrays v0.1.6 ⌅ [a98d9a8b] + Interpolations v0.14.0 ⌅ [d1acc4aa] + IntervalArithmetic v0.17.8 [8197267c] + IntervalSets v0.7.10 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] + JLD2 v0.4.54 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [b835a17e] + JpegTurbo v0.1.5 [b14d175d] + JuliaVariables v0.2.4 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [8cdb02fc] + LazyModules v0.3.1 [d3d80556] + LineSearches v7.3.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 [bdcacae8] + LoopVectorization v0.12.171 ⌅ [2fda8390] + LsqFit v0.13.0 [d8e11817] + MLStyle v0.4.17 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.15 [d125e4d3] + ManualMemory v0.1.8 [dbb5928d] + MappedArrays v0.4.2 [739be429] + MbedTLS v1.1.9 [eff96d63] + Measurements v2.12.0 [442fdcdd] + Measures v0.3.2 [c03570c3] + Memoize v0.4.4 ⌅ [626554b9] + MetaGraphs v0.7.2 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [78c3b35d] + Mocking v0.8.1 [e94cdb99] + MosaicViews v0.3.4 [98581153] + NDTools v0.7.1 [efe261a4] + NFFT v0.13.6 [d41bc354] + NLSolversBase v7.8.3 [77ba4419] + NaNMath v1.1.2 [71a1bf82] + NameResolution v0.1.5 ⌃ [93a0284f] + NeXLCore v0.3.11 ⌃ [3ab34fdf] + NeXLMatrixCorrection v0.3.9 [9f92fee6] + NeXLParticle v0.1.1 ⌃ [6c578565] + NeXLSpectrum v0.3.6 [7127f3d6] + NeXLUncertainties v0.2.15 [b8a86587] + NearestNeighbors v0.4.21 [f09324ee] + Netpbm v1.1.1 [978898f6] + NumberIntervals v0.2.2 [6fe1bfb0] + OffsetArrays v1.15.0 [a15396b6] + OnlineStats v1.7.1 [925886fa] + OnlineStatsBase v1.7.1 [52e1d378] + OpenEXR v0.3.3 [4d8831e6] + OpenSSL v1.4.3 [429524aa] + Optim v1.11.0 [87e2bd06] + OptimBase v2.0.2 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.32 [f57f5aa1] + PNGFiles v0.4.4 [5432bcbf] + PaddedViews v0.5.12 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.1 [7b2266bf] + PeriodicTable v1.2.1 [5ad8b20f] + PhysicalConstants v0.2.4 [eebad327] + PkgVersion v0.3.3 [1d0040c9] + PolyesterWeave v0.2.2 ⌅ [f27b6e38] + Polynomials v3.2.13 [2dfb63ee] + PooledArrays v1.4.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [8162dcfd] + PrettyPrint v0.2.0 [08abe8d2] + PrettyTables v2.4.0 [3362a694] + Procrastinate v0.1.1 [92933f4c] + ProgressMeter v1.10.2 [43287f4e] + PtrArrays v1.3.0 [4b34888f] + QOI v1.0.1 [1fd47b50] + QuadGK v2.11.2 [94ee1d12] + Quaternions v0.7.6 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [c1ae055f] + RealDot v0.1.0 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [42d2dcc6] + Referenceables v0.1.3 [dee08c22] + RegionTrees v0.3.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [f2b01f46] + Roots v2.2.6 [6038ab10] + Rotations v1.7.1 [5eaf0fd0] + RoundingEmulator v0.2.1 [fdea26ae] + SIMD v3.7.1 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 [0aa819cd] + SQLite v1.6.1 [6c6a2e73] + Scratch v1.2.1 [91c51154] + SentinelArrays v1.4.8 [3cc68bcd] + SetRounding v0.2.1 [efcf1570] + Setfield v1.1.2 [1277b4bf] + ShiftedArrays v2.0.0 [777ac1f9] + SimpleBufferStream v1.2.0 [699a6c99] + SimpleTraits v0.9.4 [47aef6b3] + SimpleWeightedGraphs v1.4.0 [45858cf5] + Sixel v0.1.3 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [171d559e] + SplittablesBase v0.1.15 [cae243ae] + StackViews v0.1.1 [aedffcd0] + Static v1.1.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 ⌅ [2913bbd2] + StatsBase v0.33.21 [4c63d2b9] + StatsFuns v1.3.2 [69024149] + StringEncodings v0.3.7 [892a3eda] + StringManipulation v0.4.1 ⌅ [09ab397b] + StructArrays v0.6.21 [dc5dba14] + TZJData v1.4.0+2025a [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [62fd8b95] + TensorCore v0.1.1 [8290d209] + ThreadingUtilities v0.5.2 [ac1d9e8a] + ThreadsX v0.1.12 ⌅ [731e570b] + TiffImages v0.10.2 ⌅ [06e1c1a7] + TiledIteration v0.3.1 [f269a46b] + TimeZones v1.21.2 [3bb67fe8] + TranscodingStreams v0.11.3 [28d57a85] + Transducers v0.4.84 [5c2747f8] + URIs v1.5.1 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.22.0 [3d5dd08c] + VectorizationBase v0.21.71 [ea10d353] + WeakRefStrings v1.4.2 ⌅ [efce3f68] + WoodburyMatrices v0.5.6 [76eceee3] + WorkerUtilities v1.6.1 [cd4c43a9] + Dierckx_jll v0.2.0+0 [5ae413db] + EarCut_jll v2.2.4+0 [f5851436] + FFTW_jll v3.3.10+3 [61579ee1] + Ghostscript_jll v9.55.0+4 [0234f1f7] + HDF5_jll v1.14.5+0 [e33a78d0] + Hwloc_jll v2.12.0+0 ⌅ [c73af94c] + ImageMagick_jll v6.9.13+0 [905a6f67] + Imath_jll v3.1.11+0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [aacddb02] + JpegTurbo_jll v3.1.1+0 [88015f11] + LERC_jll v4.0.1+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [89763e89] + Libtiff_jll v4.7.1+0 [d3a379c0] + LittleCMS_jll v2.16.0+0 [856f044c] + MKL_jll v2025.0.1+1 [7cb0a576] + MPICH_jll v4.3.0+0 [f1f71cc9] + MPItrampoline_jll v5.5.2+0 [c8ffd9c3] + MbedTLS_jll v2.28.6+2 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [18a262bb] + OpenEXR_jll v3.2.4+0 [643b3616] + OpenJpeg_jll v2.5.4+0 [fe0851c0] + OpenMPI_jll v5.0.7+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [76ed43ae] + SQLite_jll v3.48.0+0 [02c8fc9c] + XML2_jll v2.13.6+1 [ffd25f8a] + XZ_jll v5.6.4+1 [3161d3a3] + Zstd_jll v1.5.7+1 [477f73a3] + libaec_jll v1.1.3+0 [b53b4c65] + libpng_jll v1.6.46+0 [075b6546] + libsixel_jll v1.10.5+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building CRlibm → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9d1c22cff9c04207f336b8e64840d0bd40d86e0e/build.log` Building HDF5 ──→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/114e20044677badbc631ee6fdc80a67920561a29/build.log` Installation completed after 33.09s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 14555.7 ms ✓ Transducers → TransducersOnlineStatsBaseExt 13341.5 ms ✓ NeXLUncertainties 46658.0 ms ✓ FourierTools 106407.9 ms ? NeXLUncertainties → NeXLUncertaintiesDataFramesExt 7040.3 ms ✓ NeXLUncertainties → NeXLUncertaintiesLaTeXStringsExt 122139.2 ms ? NeXLCore 85641.2 ms ? NeXLMatrixCorrection 134980.1 ms ? NeXLSpectrum 133868.4 ms ? NeXLParticle 4 dependencies successfully precompiled in 679 seconds. 389 already precompiled. 5 dependencies failed but may be precompilable after restarting julia 5 dependencies had output during precompilation: ┌ NeXLUncertainties → NeXLUncertaintiesDataFramesExt │ WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Statistics.cov), SparseArrays.SparseMatrixCSC{Tv, Ti} where Ti<:Integer where Tv) in module SparseArraysExt at /home/pkgeval/.julia/packages/Statistics/gbcbG/ext/SparseArraysExt.jl:14 overwritten in module SparseArraysExt on the same line (check for duplicate calls to `include`). │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ NeXLSpectrum │ WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Statistics.cov), SparseArrays.SparseMatrixCSC{Tv, Ti} where Ti<:Integer where Tv) in module SparseArraysExt at /home/pkgeval/.julia/packages/Statistics/gbcbG/ext/SparseArraysExt.jl:14 overwritten in module SparseArraysExt on the same line (check for duplicate calls to `include`). │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ NeXLParticle │ WARNING: method definition for IntervalBox at /home/pkgeval/.julia/packages/IntervalArithmetic/dhnJB/src/multidim/intervalbox.jl:21 declares type variable T but does not use it. │ WARNING: method definition for IntervalBox at /home/pkgeval/.julia/packages/IntervalArithmetic/dhnJB/src/multidim/intervalbox.jl:21 declares type variable N but does not use it. │ WARNING: Method definition ==(PeriodicTable.Element, PeriodicTable.Element) in module PeriodicTable at /home/pkgeval/.julia/packages/PeriodicTable/S55ll/src/PeriodicTable.jl:279 overwritten in module NeXLCore at /home/pkgeval/.julia/packages/NeXLCore/kYGvK/src/element.jl:56. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ NeXLCore │ WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Statistics.cov), SparseArrays.SparseMatrixCSC{Tv, Ti} where Ti<:Integer where Tv) in module SparseArraysExt at /home/pkgeval/.julia/packages/Statistics/gbcbG/ext/SparseArraysExt.jl:14 overwritten in module SparseArraysExt on the same line (check for duplicate calls to `include`). │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ NeXLMatrixCorrection │ WARNING: Method definition ==(PeriodicTable.Element, PeriodicTable.Element) in module PeriodicTable at /home/pkgeval/.julia/packages/PeriodicTable/S55ll/src/PeriodicTable.jl:279 overwritten in module NeXLCore at /home/pkgeval/.julia/packages/NeXLCore/kYGvK/src/element.jl:56. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ Precompilation completed after 670.55s ################################################################################ # Loading # Loading NeXLParticle... Precompiling packages... 31802.6 ms ? NeXLCore 32349.2 ms ? NeXLMatrixCorrection 36276.2 ms ? NeXLSpectrum Info Given NeXLParticle was explicitly requested, output will be shown live  WARNING: Method definition ==(PeriodicTable.Element, PeriodicTable.Element) in module PeriodicTable at /home/pkgeval/.julia/packages/PeriodicTable/S55ll/src/PeriodicTable.jl:279 overwritten in module NeXLCore at /home/pkgeval/.julia/packages/NeXLCore/kYGvK/src/element.jl:56. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 54129.0 ms ? NeXLParticle WARNING: Method definition ==(PeriodicTable.Element, PeriodicTable.Element) in module PeriodicTable at /home/pkgeval/.julia/packages/PeriodicTable/S55ll/src/PeriodicTable.jl:279 overwritten in module NeXLCore at /home/pkgeval/.julia/packages/NeXLCore/kYGvK/src/element.jl:56. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. Precompiling packages... 5490.9 ms ✓ BangBang → BangBangStaticArraysExt 10248.2 ms ✓ Compose 55008.2 ms ✓ JLD2 7973.6 ms ✓ OpenEXR 13736.2 ms ✓ Graphs 5113.4 ms ✓ Interpolations 3601.9 ms ✓ Polynomials → PolynomialsChainRulesCoreExt 4956.1 ms ✓ TimeZones → TimeZonesRecipesBaseExt 60456.4 ms ✓ ImageCore 8929.1 ms ✓ ColorSchemes 2171.8 ms ✓ Roots → RootsForwardDiffExt 9594.5 ms ✓ Clustering 6085.5 ms ✓ Transducers → TransducersOnlineStatsBaseExt 2558.5 ms ✓ OptimBase 7195.5 ms ✓ Distributions → DistributionsChainRulesCoreExt 9440.3 ms ✓ OnlineStats 33311.1 ms ✓ NFFT 6445.4 ms ✓ LoopVectorization → ForwardDiffExt 11324.6 ms ✓ MetaGraphs 4696.0 ms ✓ SimpleWeightedGraphs 6663.3 ms ✓ ImageMorphology 6667.7 ms ✓ ImageBase 8390.1 ms ✓ PNGFiles 15819.9 ms ✓ ImageMagick 14546.6 ms ✓ JpegTurbo 15050.3 ms ✓ Sixel 29266.9 ms ? NeXLCore 8693.5 ms ✓ LsqFit 8336.6 ms ✓ FourierTools 5912.8 ms ✓ ImageDistances 9414.1 ms ✓ ImageAxes 13057.5 ms ✓ ImageTransformations 99571.0 ms ✓ ImageFiltering 14322.0 ms ✓ ImageShow 33491.5 ms ? NeXLMatrixCorrection 9117.4 ms ✓ ImageMetadata 12599.0 ms ✓ ImageContrastAdjustment 25070.1 ms ✓ ImageSegmentation 12923.7 ms ✓ Netpbm 27207.7 ms ✓ ImageQualityIndexes 34479.1 ms ✓ Images Info Given NeXLSpectrum was explicitly requested, output will be shown live  WARNING: Method definition ==(PeriodicTable.Element, PeriodicTable.Element) in module PeriodicTable at /home/pkgeval/.julia/packages/PeriodicTable/S55ll/src/PeriodicTable.jl:279 overwritten in module NeXLCore at /home/pkgeval/.julia/packages/NeXLCore/kYGvK/src/element.jl:56. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 35240.8 ms ? NeXLSpectrum 39 dependencies successfully precompiled in 721 seconds. 351 already precompiled. 3 dependencies failed but may be precompilable after restarting julia 5 dependencies had output during precompilation: ┌ ImageFiltering │ WARNING: Constructor for type "Alg" was extended in `ImageFiltering` without explicit qualification or import. │ NOTE: Assumed "Alg" refers to `Algorithm.Alg`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Alg end`. │ Hint: To silence the warning, qualify `Alg` as `Algorithm.Alg` in the method signature or explicitly `import Algorithm: Alg`. └ ┌ NeXLSpectrum │ [Output was shown above] └ ┌ NeXLCore │ WARNING: Method definition ==(PeriodicTable.Element, PeriodicTable.Element) in module PeriodicTable at /home/pkgeval/.julia/packages/PeriodicTable/S55ll/src/PeriodicTable.jl:279 overwritten in module NeXLCore at /home/pkgeval/.julia/packages/NeXLCore/kYGvK/src/element.jl:56. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ NeXLMatrixCorrection │ WARNING: Method definition ==(PeriodicTable.Element, PeriodicTable.Element) in module PeriodicTable at /home/pkgeval/.julia/packages/PeriodicTable/S55ll/src/PeriodicTable.jl:279 overwritten in module NeXLCore at /home/pkgeval/.julia/packages/NeXLCore/kYGvK/src/element.jl:56. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ Interpolations │ WARNING: method definition for checkbounds at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/Interpolations.jl:454 declares type variable N but does not use it. │ WARNING: method definition for checkbounds at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/Interpolations.jl:457 declares type variable N but does not use it. │ WARNING: method definition for GriddedInterpolation at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/gridded/gridded.jl:37 declares type variable pad but does not use it. │ WARNING: method definition for GriddedInterpolation at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/gridded/gridded.jl:60 declares type variable pad but does not use it. │ WARNING: method definition for interpolate! at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/deprecations.jl:30 declares type variable TWeights but does not use it. └ WARNING: Method definition ==(PeriodicTable.Element, PeriodicTable.Element) in module PeriodicTable at /home/pkgeval/.julia/packages/PeriodicTable/S55ll/src/PeriodicTable.jl:279 overwritten in module NeXLCore at /home/pkgeval/.julia/packages/NeXLCore/kYGvK/src/element.jl:56. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. Precompiling packages... Info Given NeXLCore was explicitly requested, output will be shown live  WARNING: Method definition ==(PeriodicTable.Element, PeriodicTable.Element) in module PeriodicTable at /home/pkgeval/.julia/packages/PeriodicTable/S55ll/src/PeriodicTable.jl:279 overwritten in module NeXLCore at /home/pkgeval/.julia/packages/NeXLCore/kYGvK/src/element.jl:56. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 32344.0 ms ? NeXLCore WARNING: Method definition ==(PeriodicTable.Element, PeriodicTable.Element) in module PeriodicTable at /home/pkgeval/.julia/packages/PeriodicTable/S55ll/src/PeriodicTable.jl:279 overwritten in module NeXLCore at /home/pkgeval/.julia/packages/NeXLCore/kYGvK/src/element.jl:56. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 7-Zip (a) [64] 17.05 : Copyright (c) 1999-2021 Igor Pavlov : 2017-08-28 p7zip Version 17.05 (locale=C.UTF-8,Utf16=on,HugeFiles=on,64 bits,128 CPUs AMD EPYC 7502 32-Core Processor (830F10),ASM,AES-NI) Extracting archive: -- Path = Type = tar Code Page = UTF-8 Everything is Ok Files: 2 Size: 81789056 Compressed: 2048 ERROR: LoadError: ConcurrencyViolationError("deadlock detected in loading NeXLCore -> NeXLCore && NeXLSpectrum && NeXLParticle") Stacktrace: [1] canstart_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2214 [2] start_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2222 [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing) @ Base ./loading.jl:2488 [4] macro expansion @ ./loading.jl:2421 [inlined] [5] macro expansion @ ./lock.jl:376 [inlined] [6] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [7] #invoke_in_world#2 @ ./essentials.jl:1125 [inlined] [8] invoke_in_world @ ./essentials.jl:1121 [inlined] [9] require(into::Module, mod::Symbol) @ Base ./loading.jl:2366 [10] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:308 [11] top-level scope @ ~/.julia/packages/NeXLCore/kYGvK/src/NeXLCore.jl:139 [12] include(mod::Module, _path::String) @ Base ./Base.jl:307 [13] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2721 [14] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2493 [15] macro expansion @ ./loading.jl:2421 [inlined] [16] macro expansion @ ./lock.jl:376 [inlined] [17] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [18] #invoke_in_world#2 @ ./essentials.jl:1125 [inlined] [19] invoke_in_world @ ./essentials.jl:1121 [inlined] [20] require(into::Module, mod::Symbol) @ Base ./loading.jl:2366 [21] top-level scope @ ~/.julia/packages/NeXLSpectrum/G4P1h/src/NeXLSpectrum.jl:4 [22] include(mod::Module, _path::String) @ Base ./Base.jl:307 [23] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2721 [24] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2493 [25] macro expansion @ ./loading.jl:2421 [inlined] [26] macro expansion @ ./lock.jl:376 [inlined] [27] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [28] #invoke_in_world#2 @ ./essentials.jl:1125 [inlined] [29] invoke_in_world @ ./essentials.jl:1121 [inlined] [30] require(into::Module, mod::Symbol) @ Base ./loading.jl:2366 [31] include(mod::Module, _path::String) @ Base ./Base.jl:307 [32] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2721 [33] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2493 [34] macro expansion @ ./loading.jl:2421 [inlined] [35] macro expansion @ ./lock.jl:376 [inlined] [36] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [37] #invoke_in_world#2 @ ./essentials.jl:1125 [inlined] [38] invoke_in_world @ ./essentials.jl:1121 [inlined] [39] require(into::Module, mod::Symbol) @ Base ./loading.jl:2366 [40] eval(m::Module, e::Any) @ Core ./boot.jl:488 [41] exec_options(opts::Base.JLOptions) @ Base ./client.jl:294 [42] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/NeXLCore/kYGvK/src/matparser.jl:1 in expression starting at /home/pkgeval/.julia/packages/NeXLCore/kYGvK/src/NeXLCore.jl:1 in expression starting at /home/pkgeval/.julia/packages/NeXLSpectrum/G4P1h/src/NeXLSpectrum.jl:1 in expression starting at /home/pkgeval/.julia/packages/NeXLParticle/rjtdp/src/NeXLParticle.jl:1 Loading failed after 1136.52s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using NeXLParticle'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:598 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:513 [3] run(::Cmd) @ Base ./process.jl:510 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:307 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [7] _start() @ Base ./client.jl:560 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 1888.35s: illegal method overwrites during precompilation