Package evaluation of AlgebraicPetri on Julia 1.13.0-DEV.123 (e910e6fb06*) started at 2025-03-01T20:32:05.310 ################################################################################ # Set-up # Set-up completed after 0.25s ################################################################################ # Installation # Installing AlgebraicPetri... Resolving package versions... Installed GPUArraysCore ─────────────── v0.2.0 Installed IrrationalConstants ───────── v0.2.4 Installed Crayons ───────────────────── v4.1.1 Installed Adapt ─────────────────────── v4.2.0 Installed DiffRules ─────────────────── v1.15.1 Installed ColorTypes ────────────────── v0.11.5 Installed XML2_jll ──────────────────── v2.13.6+1 Installed GATlab ────────────────────── v0.1.5 Installed JSON ──────────────────────── v0.21.4 Installed TableTraits ───────────────── v1.0.1 Installed IterTools ─────────────────── v1.10.0 Installed JSON3 ─────────────────────── v1.14.1 Installed Accessors ─────────────────── v0.1.42 Installed Preferences ───────────────── v1.4.3 Installed PrettyTables ──────────────── v2.4.0 Installed DiffResults ───────────────── v1.1.0 Installed Tables ────────────────────── v1.12.0 Installed DataAPI ───────────────────── v1.16.0 Installed Parsers ───────────────────── v2.8.1 Installed RuntimeGeneratedFunctions ─── v0.5.13 Installed FixedPointNumbers ─────────── v0.8.5 Installed SpecialFunctions ──────────── v2.5.0 Installed Permutations ──────────────── v0.4.23 Installed RecipesBase ───────────────── v1.3.4 Installed Measures ──────────────────── v0.3.2 Installed StaticArraysCore ──────────── v1.4.3 Installed JLLWrappers ───────────────── v1.7.0 Installed StaticArrays ──────────────── v1.9.13 Installed NaNMath ───────────────────── v1.1.2 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed LabelledArrays ────────────── v1.16.0 Installed ConstructionBase ──────────── v1.5.8 Installed DataValueInterfaces ───────── v1.0.0 Installed NameResolution ────────────── v0.1.5 Installed LaTeXStrings ──────────────── v1.4.0 Installed OrderedCollections ────────── v1.8.0 Installed PrecompileTools ───────────── v1.2.1 Installed GeneralizedGenerated ──────── v0.3.3 Installed Combinatorics ─────────────── v1.0.2 Installed CompTime ──────────────────── v0.1.2 Installed SymbolicIndexingInterface ─── v0.3.38 Installed ChainRulesCore ────────────── v1.25.1 ┌ Warning: tarball content does not match git-tree-sha1 └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:757 Installed RecursiveArrayTools ───────── v3.31.0 Installed AlgebraicInterfaces ───────── v0.1.4 Installed ArrayInterface ────────────── v7.18.0 Installed Catlab ────────────────────── v0.16.19 Installed ForwardDiff ───────────────── v0.10.38 Installed Reexport ──────────────────── v1.2.2 Installed AlgebraicPetri ────────────── v0.9.2 Installed Statistics ────────────────── v1.11.1 Installed PreallocationTools ────────── v0.4.25 Installed Requires ──────────────────── v1.3.1 Installed CommonSubexpressions ──────── v0.3.1 Installed Colors ────────────────────── v0.12.11 Installed DataStructures ────────────── v0.18.20 Installed LogExpFunctions ───────────── v0.3.29 Installed StructEquality ────────────── v2.1.0 Installed MacroTools ────────────────── v0.5.15 Installed MLStyle ───────────────────── v0.4.17 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed PrettyPrint ───────────────── v0.2.0 Installed Compat ────────────────────── v4.16.0 Installed CompositionsBase ──────────── v0.1.2 Installed ExprTools ─────────────────── v0.1.10 Installed LightXML ──────────────────── v0.9.1 Installed InverseFunctions ──────────── v0.1.17 Installed JuliaVariables ────────────── v0.2.4 Installed PEG ───────────────────────── v1.0.2 Installed StructTypes ───────────────── v1.11.0 Installed StringManipulation ────────── v0.4.1 Installed Compose ───────────────────── v0.9.5 Installed DocStringExtensions ───────── v0.9.3 Cloning [227ef7b5-1206-438b-ac65-934d6da304b8] ACSets from https://github.com/AlgebraicJulia/ACSets.jl.git Installed ACSets ────────────────────── v0.2.21 Installing 3 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact Libiconv 1.9 MiB Installed artifact XML2 2.5 MiB Updating `~/.julia/environments/v1.13/Project.toml` [4f99eebe] + AlgebraicPetri v0.9.2 Updating `~/.julia/environments/v1.13/Manifest.toml` [227ef7b5] + ACSets v0.2.21 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.2.0 [23cfdc9f] + AlgebraicInterfaces v0.1.4 [4f99eebe] + AlgebraicPetri v0.9.2 [4fba245c] + ArrayInterface v7.18.0 [134e5e36] + Catlab v0.16.19 [d360d2e6] + ChainRulesCore v1.25.1 ⌅ [3da002f7] + ColorTypes v0.11.5 ⌅ [5ae59095] + Colors v0.12.11 [861a8166] + Combinatorics v1.0.2 [bbf7d656] + CommonSubexpressions v0.3.1 [0fb5dd42] + CompTime v0.1.2 [34da2185] + Compat v4.16.0 [a81c6b42] + Compose v0.9.5 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.5.8 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.20 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [ffbed154] + DocStringExtensions v0.9.3 [e2ba6199] + ExprTools v0.1.10 [53c48c17] + FixedPointNumbers v0.8.5 [f6369f11] + ForwardDiff v0.10.38 ⌅ [f0ffcf3b] + GATlab v0.1.5 [46192b85] + GPUArraysCore v0.2.0 [6b9d7cbe] + GeneralizedGenerated v0.3.3 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.1 [b14d175d] + JuliaVariables v0.2.4 [b964fa9f] + LaTeXStrings v1.4.0 [2ee39098] + LabelledArrays v1.16.0 [9c8b4983] + LightXML v0.9.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.15 [442fdcdd] + Measures v0.3.2 [77ba4419] + NaNMath v1.1.2 [71a1bf82] + NameResolution v0.1.5 [bac558e1] + OrderedCollections v1.8.0 [12d937ae] + PEG v1.0.2 [69de0a69] + Parsers v2.8.1 [2ae35dd2] + Permutations v0.4.23 [d236fae5] + PreallocationTools v0.4.25 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [8162dcfd] + PrettyPrint v0.2.0 [08abe8d2] + PrettyTables v2.4.0 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.31.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [7e49a35a] + RuntimeGeneratedFunctions v0.5.13 [276daf66] + SpecialFunctions v2.5.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [892a3eda] + StringManipulation v0.4.1 [6ec83bb0] + StructEquality v2.1.0 [856f2bd8] + StructTypes v1.11.0 [2efcf032] + SymbolicIndexingInterface v0.3.38 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [94ce4f54] + Libiconv_jll v1.18.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [02c8fc9c] + XML2_jll v2.13.6+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 16.64s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 2032.8 ms ✓ Combinatorics 760.5 ms ✓ AlgebraicInterfaces 1155.0 ms ✓ OrderedCollections 737.9 ms ✓ DataValueInterfaces 839.9 ms ✓ LaTeXStrings 1122.5 ms ✓ Measures 853.6 ms ✓ InverseFunctions 24750.7 ms ✓ MLStyle 726.3 ms ✓ Reexport 1108.2 ms ✓ Statistics 825.5 ms ✓ ExprTools 2130.0 ms ✓ IrrationalConstants 900.3 ms ✓ ConstructionBase 706.8 ms ✓ IteratorInterfaceExtensions 776.7 ms ✓ PrettyPrint 809.2 ms ✓ DataAPI 1891.9 ms ✓ Crayons 1362.2 ms ✓ IterTools 4317.7 ms ✓ MacroTools 796.6 ms ✓ CompositionsBase 838.6 ms ✓ PEG 857.2 ms ✓ StaticArraysCore 995.7 ms ✓ NaNMath 1047.3 ms ✓ Requires 1732.4 ms ✓ StructTypes 1066.6 ms ✓ Compat 1200.8 ms ✓ Preferences 1288.1 ms ✓ DocStringExtensions 1222.8 ms ✓ Permutations 997.8 ms ✓ InverseFunctions → InverseFunctionsDatesExt 3883.1 ms ✓ FixedPointNumbers 1308.8 ms ✓ Statistics → SparseArraysExt 919.5 ms ✓ RuntimeGeneratedFunctions 868.3 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 799.1 ms ✓ TableTraits 848.4 ms ✓ NameResolution 1428.5 ms ✓ CommonSubexpressions 9893.4 ms ✓ CompTime 879.8 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 871.4 ms ✓ DiffResults 910.7 ms ✓ Adapt 863.9 ms ✓ Compat → CompatLinearAlgebraExt 978.2 ms ✓ PrecompileTools 1103.2 ms ✓ JLLWrappers 1292.7 ms ✓ LogExpFunctions 4673.8 ms ✓ ColorTypes 1826.3 ms ✓ Tables 11676.1 ms ✓ JuliaVariables 5019.1 ms ✓ Accessors 1394.8 ms ✓ Adapt → AdaptSparseArraysExt 1131.6 ms ✓ ArrayInterface 1088.9 ms ✓ GPUArraysCore 6772.0 ms ✓ DataStructures 1111.4 ms ✓ StructEquality 2979.5 ms ✓ ChainRulesCore 15702.4 ms ✓ StaticArrays 2829.1 ms ✓ RecipesBase 3116.6 ms ✓ StringManipulation 28003.2 ms ✓ Parsers 1226.0 ms ✓ Libiconv_jll 1263.2 ms ✓ OpenSpecFun_jll 991.2 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 6955.6 ms ✓ Colors 2128.2 ms ✓ Accessors → LinearAlgebraExt 1241.5 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 833.5 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 850.3 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 13759.0 ms ✓ GeneralizedGenerated 1417.3 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 3256.5 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 1002.1 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 1781.0 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1589.8 ms ✓ StaticArrays → StaticArraysStatisticsExt 1607.5 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1606.1 ms ✓ Adapt → AdaptStaticArraysExt 1814.7 ms ✓ Accessors → StaticArraysExt 29760.6 ms ✓ PrettyTables 19975.8 ms ✓ JSON3 4045.5 ms ✓ JSON 1490.5 ms ✓ XML2_jll 5343.0 ms ✓ SpecialFunctions 3651.2 ms ✓ SymbolicIndexingInterface ✗ ACSets 9160.4 ms ✓ Compose 65482.1 ms ✓ GATlab 1257.4 ms ✓ LightXML 4159.6 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 1462.1 ms ✓ DiffRules 4450.2 ms ✓ RecursiveArrayTools ✗ Catlab 11332.9 ms ✓ ForwardDiff 2006.3 ms ✓ RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt 5179.6 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 4743.8 ms ✓ PreallocationTools 2235.9 ms ✓ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt 6389.1 ms ✓ LabelledArrays ✗ AlgebraicPetri 94 dependencies successfully precompiled in 599 seconds. 32 already precompiled. ERROR: LoadError: The following 1 direct dependency failed to precompile: AlgebraicPetri Failed to precompile AlgebraicPetri [4f99eebe-17bf-4e98-b6a1-2c4f205a959b] to "/home/pkgeval/.julia/compiled/v1.13/AlgebraicPetri/jl_SWdL6G" (ProcessExited(1)). ERROR: LoadError: syntax: invalid syntax (end) Stacktrace: [1] top-level scope @ ~/.julia/packages/ACSets/7LOk7/src/Parsers.jl:63 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:308 [3] top-level scope @ ~/.julia/packages/ACSets/7LOk7/src/ACSets.jl:18 [4] include(mod::Module, _path::String) @ Base ./Base.jl:307 [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3004 [6] top-level scope @ stdin:6 [7] eval(m::Module, e::Any) @ Core ./boot.jl:488 [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2855 [9] include_string @ ./loading.jl:2865 [inlined] [10] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [11] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/ACSets/7LOk7/src/Parsers.jl:9 in expression starting at /home/pkgeval/.julia/packages/ACSets/7LOk7/src/ACSets.jl:1 in expression starting at stdin:6 ERROR: LoadError: Failed to precompile ACSets [227ef7b5-1206-438b-ac65-934d6da304b8] to "/home/pkgeval/.julia/compiled/v1.13/ACSets/jl_mlCqQ3" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3291 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2682 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1280 [8] #invokelatest_gr#229 @ ./reflection.jl:1288 [inlined] [9] invokelatest_gr @ ./reflection.jl:1282 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3862 [11] maybe_cachefile_lock @ ./loading.jl:3859 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2668 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2493 [14] macro expansion @ ./loading.jl:2421 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [17] #invoke_in_world#2 @ ./essentials.jl:1125 [inlined] [18] invoke_in_world @ ./essentials.jl:1121 [inlined] [19] require(into::Module, mod::Symbol) @ Base ./loading.jl:2366 [20] top-level scope @ ~/.julia/packages/Catlab/jPXBM/src/categorical_algebra/ACSetsGATsInterop.jl:8 [21] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:308 [22] top-level scope @ ~/.julia/packages/Catlab/jPXBM/src/Catlab.jl:6 [23] include(mod::Module, _path::String) @ Base ./Base.jl:307 [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3004 [25] top-level scope @ stdin:6 [26] eval(m::Module, e::Any) @ Core ./boot.jl:488 [27] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2855 [28] include_string @ ./loading.jl:2865 [inlined] [29] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [30] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/Catlab/jPXBM/src/categorical_algebra/ACSetsGATsInterop.jl:1 in expression starting at /home/pkgeval/.julia/packages/Catlab/jPXBM/src/Catlab.jl:1 in expression starting at stdin:6 ERROR: LoadError: Failed to precompile Catlab [134e5e36-593f-5add-ad60-77f754baafbe] to "/home/pkgeval/.julia/compiled/v1.13/Catlab/jl_n0EIBY" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3291 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2682 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1280 [8] #invokelatest_gr#229 @ ./reflection.jl:1288 [inlined] [9] invokelatest_gr @ ./reflection.jl:1282 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3862 [11] maybe_cachefile_lock @ ./loading.jl:3859 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2668 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2493 [14] macro expansion @ ./loading.jl:2421 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [17] #invoke_in_world#2 @ ./essentials.jl:1125 [inlined] [18] invoke_in_world @ ./essentials.jl:1121 [inlined] [19] require(into::Module, mod::Symbol) @ Base ./loading.jl:2366 [20] top-level scope @ ~/.julia/packages/AlgebraicPetri/WK5Qd/src/AlgebraicPetri.jl:21 [21] include(mod::Module, _path::String) @ Base ./Base.jl:307 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3004 [23] top-level scope @ stdin:6 [24] eval(m::Module, e::Any) @ Core ./boot.jl:488 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2855 [26] include_string @ ./loading.jl:2865 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [28] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/AlgebraicPetri/WK5Qd/src/AlgebraicPetri.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 605.88s ################################################################################ # Loading # Loading AlgebraicPetri... Precompiling packages... ✗ ACSets ✗ Catlab Info Given AlgebraicPetri was explicitly requested, output will be shown live  ERROR: LoadError: syntax: invalid syntax (end) Stacktrace:  [1] top-level scope  @ ~/.julia/packages/ACSets/7LOk7/src/Parsers.jl:63  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:308  [3] top-level scope  @ ~/.julia/packages/ACSets/7LOk7/src/ACSets.jl:18  [4] include(mod::Module, _path::String)  @ Base ./Base.jl:307  [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:3004  [6] top-level scope  @ stdin:6  [7] eval(m::Module, e::Any)  @ Core ./boot.jl:488  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2855  [9] include_string  @ ./loading.jl:2865 [inlined]  [10] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:326  [11] _start()  @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/ACSets/7LOk7/src/Parsers.jl:9 in expression starting at /home/pkgeval/.julia/packages/ACSets/7LOk7/src/ACSets.jl:1 in expression starting at stdin:6 ERROR: LoadError: Failed to precompile ACSets [227ef7b5-1206-438b-ac65-934d6da304b8] to "/home/pkgeval/.julia/compiled/v1.13/ACSets/jl_pELYnQ" (ProcessExited(1)). Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3291  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()  @ Base ./loading.jl:2682  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93  [5] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})  @ Base ./reflection.jl:1280  [8] #invokelatest_gr#229  @ ./reflection.jl:1288 [inlined]  [9] invokelatest_gr  @ ./reflection.jl:1282 [inlined]  [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3862  [11] maybe_cachefile_lock  @ ./loading.jl:3859 [inlined]  [12] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2668  [13] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2493  [14] macro expansion  @ ./loading.jl:2421 [inlined]  [15] macro expansion  @ ./lock.jl:376 [inlined]  [16] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2386  [17] #invoke_in_world#2  @ ./essentials.jl:1125 [inlined]  [18] invoke_in_world  @ ./essentials.jl:1121 [inlined]  [19] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2366  [20] top-level scope  @ ~/.julia/packages/Catlab/jPXBM/src/categorical_algebra/ACSetsGATsInterop.jl:8  [21] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:308  [22] top-level scope  @ ~/.julia/packages/Catlab/jPXBM/src/Catlab.jl:6  [23] include(mod::Module, _path::String)  @ Base ./Base.jl:307  [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:3004  [25] top-level scope  @ stdin:6  [26] eval(m::Module, e::Any)  @ Core ./boot.jl:488  [27] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2855  [28] include_string  @ ./loading.jl:2865 [inlined]  [29] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:326  [30] _start()  @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/Catlab/jPXBM/src/categorical_algebra/ACSetsGATsInterop.jl:1 in expression starting at /home/pkgeval/.julia/packages/Catlab/jPXBM/src/Catlab.jl:1 in expression starting at stdin:6 ERROR: LoadError: Failed to precompile Catlab [134e5e36-593f-5add-ad60-77f754baafbe] to "/home/pkgeval/.julia/compiled/v1.13/Catlab/jl_xHR3O3" (ProcessExited(1)). Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3291  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()  @ Base ./loading.jl:2682  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93  [5] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})  @ Base ./reflection.jl:1280  [8] #invokelatest_gr#229  @ ./reflection.jl:1288 [inlined]  [9] invokelatest_gr  @ ./reflection.jl:1282 [inlined]  [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3862  [11] maybe_cachefile_lock  @ ./loading.jl:3859 [inlined]  [12] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2668  [13] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2493  [14] macro expansion  @ ./loading.jl:2421 [inlined]  [15] macro expansion  @ ./lock.jl:376 [inlined]  [16] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2386  [17] #invoke_in_world#2  @ ./essentials.jl:1125 [inlined]  [18] invoke_in_world  @ ./essentials.jl:1121 [inlined]  [19] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2366  [20] top-level scope  @ ~/.julia/packages/AlgebraicPetri/WK5Qd/src/AlgebraicPetri.jl:21  [21] include(mod::Module, _path::String)  @ Base ./Base.jl:307  [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3004  [23] top-level scope  @ stdin:6  [24] eval(m::Module, e::Any)  @ Core ./boot.jl:488  [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2855  [26] include_string  @ ./loading.jl:2865 [inlined]  [27] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:326  [28] _start()  @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/AlgebraicPetri/WK5Qd/src/AlgebraicPetri.jl:1 in expression starting at stdin:6 ✗ AlgebraicPetri 0 dependencies successfully precompiled in 186 seconds. 126 already precompiled. ERROR: The following 1 direct dependency failed to precompile: AlgebraicPetri Failed to precompile AlgebraicPetri [4f99eebe-17bf-4e98-b6a1-2c4f205a959b] to "/home/pkgeval/.julia/compiled/v1.13/AlgebraicPetri/jl_O1C93I" (ProcessExited(1)). ERROR: LoadError: syntax: invalid syntax (end) Stacktrace: [1] top-level scope @ ~/.julia/packages/ACSets/7LOk7/src/Parsers.jl:63 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:308 [3] top-level scope @ ~/.julia/packages/ACSets/7LOk7/src/ACSets.jl:18 [4] include(mod::Module, _path::String) @ Base ./Base.jl:307 [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3004 [6] top-level scope @ stdin:6 [7] eval(m::Module, e::Any) @ Core ./boot.jl:488 [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2855 [9] include_string @ ./loading.jl:2865 [inlined] [10] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [11] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/ACSets/7LOk7/src/Parsers.jl:9 in expression starting at /home/pkgeval/.julia/packages/ACSets/7LOk7/src/ACSets.jl:1 in expression starting at stdin:6 ERROR: LoadError: Failed to precompile ACSets [227ef7b5-1206-438b-ac65-934d6da304b8] to "/home/pkgeval/.julia/compiled/v1.13/ACSets/jl_pELYnQ" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3291 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2682 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1280 [8] #invokelatest_gr#229 @ ./reflection.jl:1288 [inlined] [9] invokelatest_gr @ ./reflection.jl:1282 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3862 [11] maybe_cachefile_lock @ ./loading.jl:3859 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2668 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2493 [14] macro expansion @ ./loading.jl:2421 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [17] #invoke_in_world#2 @ ./essentials.jl:1125 [inlined] [18] invoke_in_world @ ./essentials.jl:1121 [inlined] [19] require(into::Module, mod::Symbol) @ Base ./loading.jl:2366 [20] top-level scope @ ~/.julia/packages/Catlab/jPXBM/src/categorical_algebra/ACSetsGATsInterop.jl:8 [21] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:308 [22] top-level scope @ ~/.julia/packages/Catlab/jPXBM/src/Catlab.jl:6 [23] include(mod::Module, _path::String) @ Base ./Base.jl:307 [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3004 [25] top-level scope @ stdin:6 [26] eval(m::Module, e::Any) @ Core ./boot.jl:488 [27] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2855 [28] include_string @ ./loading.jl:2865 [inlined] [29] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [30] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/Catlab/jPXBM/src/categorical_algebra/ACSetsGATsInterop.jl:1 in expression starting at /home/pkgeval/.julia/packages/Catlab/jPXBM/src/Catlab.jl:1 in expression starting at stdin:6 ERROR: LoadError: Failed to precompile Catlab [134e5e36-593f-5add-ad60-77f754baafbe] to "/home/pkgeval/.julia/compiled/v1.13/Catlab/jl_xHR3O3" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3291 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2682 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1280 [8] #invokelatest_gr#229 @ ./reflection.jl:1288 [inlined] [9] invokelatest_gr @ ./reflection.jl:1282 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3862 [11] maybe_cachefile_lock @ ./loading.jl:3859 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2668 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2493 [14] macro expansion @ ./loading.jl:2421 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2386 [17] #invoke_in_world#2 @ ./essentials.jl:1125 [inlined] [18] invoke_in_world @ ./essentials.jl:1121 [inlined] [19] require(into::Module, mod::Symbol) @ Base ./loading.jl:2366 [20] top-level scope @ ~/.julia/packages/AlgebraicPetri/WK5Qd/src/AlgebraicPetri.jl:21 [21] include(mod::Module, _path::String) @ Base ./Base.jl:307 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3004 [23] top-level scope @ stdin:6 [24] eval(m::Module, e::Any) @ Core ./boot.jl:488 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2855 [26] include_string @ ./loading.jl:2865 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [28] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/AlgebraicPetri/WK5Qd/src/AlgebraicPetri.jl:1 in expression starting at stdin: Loading failed after 187.66s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using AlgebraicPetri'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:598 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:513 [3] run(::Cmd) @ Base ./process.jl:510 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:307 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [7] _start() @ Base ./client.jl:560 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 921.86s: package has syntax issues