Package evaluation to test Pipelines on Julia 1.10.10 (df86fe4d49*) started at 2026-02-04T05:22:30.443
################################################################################
# Set-up
#
Installing PkgEval dependencies (TestEnv)...
Activating project at `~/.julia/environments/v1.10`
Set-up completed after 3.44s
################################################################################
# Installation
#
Installing Pipelines...
Resolving package versions...
Updating `~/.julia/environments/v1.10/Project.toml`
[ef544631] + Pipelines v0.12.2
Updating `~/.julia/environments/v1.10/Manifest.toml`
[34da2185] + Compat v4.18.1
[48062228] + FilePathsBase v0.9.24
[076d061b] + HashArrayMappedTries v0.2.0
[bac558e1] + OrderedCollections v1.8.1
[ef544631] + Pipelines v0.12.2
[189a3867] + Reexport v1.2.2
[ae12ab41] + ScopedStreams v0.3.9
[7e506255] + ScopedValues v1.5.0
[2a0f44e3] + Base64
[ade2ca70] + Dates
[b77e0a4c] + InteractiveUtils
[56ddb016] + Logging
[d6f4376e] + Markdown
[de0858da] + Printf
[9a3f8284] + Random
[ea8e919c] + SHA v0.7.0
[fa267f1f] + TOML v1.0.3
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Installation completed after 3.29s
################################################################################
# Precompilation
#
Precompiling PkgEval dependencies...
Precompiling packages...
868.0 ms ✓ TestEnv
1 dependency successfully precompiled in 3 seconds
Precompiling package dependencies...
Precompiling packages...
600.2 ms ✓ Compat
675.6 ms ✓ OrderedCollections
408.8 ms ✓ Reexport
464.1 ms ✓ HashArrayMappedTries
876.1 ms ✓ FilePathsBase
468.3 ms ✓ ScopedValues
1807.7 ms ✓ FilePathsBase → FilePathsBaseTestExt
2720.2 ms ✓ ScopedStreams
2277.9 ms ✓ ScopedStreams → SSTestExt
3000.1 ms ✓ Pipelines
10 dependencies successfully precompiled in 13 seconds. 1 already precompiled.
Precompilation completed after 20.7s
################################################################################
# Testing
#
Testing Pipelines
Status `/tmp/jl_Kn8PGP/Project.toml`
[48062228] FilePathsBase v0.9.24
[bac558e1] OrderedCollections v1.8.1
[ef544631] Pipelines v0.12.2
[189a3867] Reexport v1.2.2
[ae12ab41] ScopedStreams v0.3.9
[ade2ca70] Dates
[56ddb016] Logging
[de0858da] Printf
[8dfed614] Test
[cf7118a7] UUIDs
Status `/tmp/jl_Kn8PGP/Manifest.toml`
[34da2185] Compat v4.18.1
[48062228] FilePathsBase v0.9.24
[076d061b] HashArrayMappedTries v0.2.0
[bac558e1] OrderedCollections v1.8.1
[ef544631] Pipelines v0.12.2
[189a3867] Reexport v1.2.2
[ae12ab41] ScopedStreams v0.3.9
[7e506255] ScopedValues v1.5.0
[2a0f44e3] Base64
[ade2ca70] Dates
[b77e0a4c] InteractiveUtils
[56ddb016] Logging
[d6f4376e] Markdown
[de0858da] Printf
[9a3f8284] Random
[ea8e919c] SHA v0.7.0
[9e88b42a] Serialization
[fa267f1f] TOML v1.0.3
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Testing Running tests...
stdout = ScopedStream(ScopedValues.ScopedValue{IO}(Base.PipeEndpoint(RawFD(12) open, 0 bytes waiting)))
stderr = ScopedStream(ScopedValues.ScopedValue{IO}(Base.PipeEndpoint(RawFD(14) open, 0 bytes waiting)))
0-element Vector{Arg}.
Arg:
name → str
type → Any
default → nothing
required → true
independent → false
str (required)a (default = b)sym (required, independent)sym (independent, default = aaa)[ Error: 2026-02-04 05:23:10 CmdDependencyError: invalid: `CmdDependencyExpectedNotToExist` `--version`
CmdDependency:
exec → `/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so --depwarn=yes --check-bounds=yes -g1 --startup-file=no --pkgimages=no`
test_args → `--version`
validate_success → true
validate_stdout → #4
validate_stderr → do_nothing
exit_when_fail → true
`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so --depwarn=yes --check-bounds=yes -g1 --startup-file=no --pkgimages=no``/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so --depwarn=yes --check-bounds=yes -g1 --startup-file=no --pkgimages=no`CmdDependency:
exec → `/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so --depwarn=yes --check-bounds=yes -g1 --startup-file=no --pkgimages=no`
test_args → `--version`
validate_success → true
validate_stdout → #4
validate_stderr → do_nothing
exit_when_fail → true
CmdProgram:
name → Command Program
id_file → id_file
info_before → auto
info_after → auto
cmd_dependencies → `/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so --depwarn=yes --check-bounds=yes -g1 --startup-file=no --pkgimages=no`
arg_inputs → input :: Any (required)
input2 :: Int64 (required)
optional_arg :: Any (default = 5)
optional_arg2 :: Number (default = 0.5)
validate_inputs → do_nothing
prerequisites → do_nothing
cmd → `echo input input2 optional_arg optional_arg2 output`
infer_outputs → do_nothing
arg_outputs → output :: Any (default = .output)
validate_outputs → do_nothing
wrap_up → do_nothing
arg_forward →
[ Info: Dependencies Status:
[ Info: OK Main.julia `/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so --depwarn=yes --check-bounds=yes -g1 --startup-file=no --pkgimages=no`
[ Error: 2026-02-04 05:23:13 CmdDependencyError: invalid: `CmdDependencyExpectedNotToExist` `--version`
[ Info: FAIL Main.never_dep `CmdDependencyExpectedNotToExist`
[ Info: OK Main.p
[ Error: 2026-02-04 05:23:13 CmdDependencyError: invalid: `CmdDependencyExpectedNotToExist` `--version`
[ Info: Dependencies Status:
[ Info: OK Main.julia `/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so --depwarn=yes --check-bounds=yes -g1 --startup-file=no --pkgimages=no`
[ Info: OK Main.p
[ Info: 2026-02-04 05:23:16 Started: Command Program [d73fdd2c-5c42-5aec-b1f5-bce033712730]
in1 2 5 0.5 out
[ Info: 2026-02-04 05:23:16 Finished: Command Program [d73fdd2c-5c42-5aec-b1f5-bce033712730]
[ Info: 2026-02-04 05:23:17 Started: Command Program [d73fdd2c-5c42-5aec-b1f5-bce033712730]
in1 2 5 0.5 out
[ Info: 2026-02-04 05:23:17 Finished: Command Program [d73fdd2c-5c42-5aec-b1f5-bce033712730]
CmdProgram:
name → Bowtie2 Mapping
id_file → .bowtie2
info_before → auto
info_after → auto
cmd_dependencies →
arg_inputs → FASTQ :: Any (required)
REF :: Any (required)
validate_inputs → #15
prerequisites → #16
cmd → pipeline(`bowtie2 -x REF -q FASTQ`, stdout=`samtools sort -O bam -o BAM`)
infer_outputs → #17
arg_outputs → BAM :: Any (required)
validate_outputs → #18
wrap_up → #19
arg_forward →
CmdProgram(Bowtie2 Mapping, pipeline(`bowtie2 -x REF -q FASTQ`, stdout=`samtools sort -O bam -o BAM`))CmdProgram(Bowtie2 Mapping, pipeline(`bowtie2 -x REF -q FASTQ`, stdout=`samtools sort -O bam -o BAM`))CmdProgram:
name → Bowtie2 Mapping
id_file → .bowtie2
info_before → auto
info_after → auto
cmd_dependencies →
arg_inputs → FASTQ :: Any (required)
REF :: Any (required)
validate_inputs → #15
prerequisites → #16
cmd → pipeline(`bowtie2 -x REF -q FASTQ`, stdout=`samtools sort -O bam -o BAM`)
infer_outputs → #17
arg_outputs → BAM :: Any (required)
validate_outputs → #18
wrap_up → #19
arg_forward →
JuliaProgram:
name → Julia Program
id_file → id_file
info_before → auto
info_after → auto
cmd_dependencies →
arg_inputs → a :: Any (required)
b :: Int64 (required)
validate_inputs → do_nothing
prerequisites → do_nothing
main → #28
infer_outputs → do_nothing
arg_outputs → c :: Any (default = .)
validate_outputs → do_nothing
wrap_up → do_nothing
arg_forward →
JuliaProgram(Julia Program, inputs = ["a", "b"], outputs = ["c"])JuliaProgram(Julia Program, inputs = ["a", "b"], outputs = ["c"])JuliaProgram:
name → Julia Program
id_file → id_file
info_before → auto
info_after → auto
cmd_dependencies →
arg_inputs → a :: Any (required)
b :: Int64 (required)
validate_inputs → do_nothing
prerequisites → do_nothing
main → #28
infer_outputs → do_nothing
arg_outputs → c :: Any (default = .)
validate_outputs → do_nothing
wrap_up → do_nothing
arg_forward →
[ Info: 2026-02-04 05:23:20 Started: Julia Program [3fbac19c-88ef-594a-91a0-b2b0f1fe899d]
inputs are `in1` and 2
You can also use info in outputs: out
The returned value will be assigned to a new outputs
[ Info: 2026-02-04 05:23:20 Finished: Julia Program [3fbac19c-88ef-594a-91a0-b2b0f1fe899d]
┌ Info: 2026-02-04 05:23:20 Started: Julia Program
│ run_id = UUID("68f72372-20dd-581a-827b-0be5661a4d8d")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "b" => 2
│ "a" => `in1`
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "c" => "in1.2"
inputs are `in1` and 2
You can also use info in outputs: in1.2
The returned value will be assigned to a new outputs
┌ Info: 2026-02-04 05:23:21 Finished: Julia Program
│ run_id = UUID("68f72372-20dd-581a-827b-0be5661a4d8d")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "b" => 2
│ "a" => `in1`
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "c" => 4
┌ Info: 2026-02-04 05:23:21 Started: Julia Program
│ run_id = UUID("a0e80efd-935f-559d-8d8d-d1ec4799ad6d")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "b" => 5
│ "a" => 10.6
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "c" => "10.6.5"
┌ Info: 2026-02-04 05:23:21 Finished: Julia Program
│ run_id = UUID("a0e80efd-935f-559d-8d8d-d1ec4799ad6d")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "b" => 5
│ "a" => 10.6
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "c" => 25
┌ Info: 2026-02-04 05:23:22 Started: Julia Program
│ run_id = UUID("a0e80efd-935f-559d-8d8d-d1ec4799ad6d")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "b" => 5
│ "a" => 10.6
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "c" => "10.6.5"
┌ Info: 2026-02-04 05:23:22 Finished: Julia Program
│ run_id = UUID("a0e80efd-935f-559d-8d8d-d1ec4799ad6d")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "b" => 5
│ "a" => 10.6
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "c" => 25
┌ Info: 2026-02-04 05:23:22 Started: Julia Program
│ run_id = UUID("fd62179c-557b-5aff-b93e-de4b378eca8e")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "b" => 2
│ "a" => 10.6
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "c" => "10.6.2"
┌ Info: 2026-02-04 05:23:22 Finished: Julia Program
│ run_id = UUID("fd62179c-557b-5aff-b93e-de4b378eca8e")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "b" => 2
│ "a" => 10.6
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "c" => 4
┌ Info: 2026-02-04 05:23:22 Started: Julia Program
│ run_id = UUID("116c3e13-a295-55d5-b45b-a1cd7204ed29")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "b" => 5
│ "a" => 8.0
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "c" => "8.0.5"
┌ Info: 2026-02-04 05:23:22 Finished: Julia Program
│ run_id = UUID("116c3e13-a295-55d5-b45b-a1cd7204ed29")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "b" => 5
│ "a" => 8.0
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "c" => 25
stderr> 5
stdout> 6.6
stdout> 6.6
┌ Info: 2026-02-04 05:23:24 Started: Julia Program
│ run_id = UUID("a0e80efd-935f-559d-8d8d-d1ec4799ad6d")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "b" => 5
│ "a" => 10.6
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "c" => "10.6.5"
stdout> 10.6
stderr> 5
[ Info: Dict{String, Any}("c" => "10.6.5")
┌ Info: 2026-02-04 05:23:25 Finished: Julia Program
│ run_id = UUID("a0e80efd-935f-559d-8d8d-d1ec4799ad6d")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "b" => 5
│ "a" => 10.6
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "c" => 25
stdout = ScopedStream(ScopedValues.ScopedValue{IO}(Base.PipeEndpoint(RawFD(12) open, 0 bytes waiting)))
stderr = ScopedStream(ScopedValues.ScopedValue{IO}(Base.PipeEndpoint(RawFD(14) open, 0 bytes waiting)))
[ Info: 2026-02-04 05:23:25 Started: Command Program [5bfa9ca1-6585-4a4e-80c9-2736b08b23a6]
ERROR: unknown option `--abcdefg`
┌ Error: 2026-02-04 05:23:25 ProgramRunningError: Command Program: fail to run the main command.
│ prerequisites = do_nothing (generic function with 3 methods)
│ command_running = `julia --abcdefg`
│ run_id = UUID("5bfa9ca1-6585-4a4e-80c9-2736b08b23a6")
│ inputs = Dict{String, Any}()
└ outputs = Dict{String, Any}()
┌ Error: Program Command Program failed but will retry.
│ exception =
│ failed process: Process(`julia --abcdefg`, ProcessExited(1)) [1]
│
│ Stacktrace:
│ [1] pipeline_error
│ @ ./process.jl:565 [inlined]
│ [2] run(::Cmd, ::Base.DevNull, ::Vararg{Any}; wait::Bool)
│ @ Base ./process.jl:480
│ [3] run(::Cmd, ::Base.DevNull, ::Base.PipeEndpoint, ::Base.PipeEndpoint)
│ @ Base ./process.jl:477
│ [4] _run(p::CmdProgram; inputs::Dict{String, Any}, outputs::Dict{String, Any}, skip_when_done::Bool, check_dependencies::Bool, verbose::Symbol, touch_run_id_file::Bool, dry_run::Bool, dir::String, _do_xxputs_completion_and_check::Bool)
│ @ Pipelines ~/.julia/packages/Pipelines/5Y6rI/src/CmdProgram.jl:268
│ [5] (::Pipelines.var"#30#31"{Int64, Bool, @Kwargs{verbose::Symbol}, CmdProgram})()
│ @ Pipelines ~/.julia/packages/Pipelines/5Y6rI/src/Program.jl:303
│ [6] redirect_stream
│ @ ~/.julia/packages/ScopedStreams/MN2ka/src/ScopedStreams.jl:194 [inlined]
│ [7] run(p::CmdProgram; dir::String, retry::Int64, stdout::Nothing, stderr::Nothing, stdlog::Nothing, append::Bool, _do_parse_program_args::Bool, kwarg::@Kwargs{verbose::Symbol})
│ @ Pipelines ~/.julia/packages/Pipelines/5Y6rI/src/Program.jl:298
│ [8] macro expansion
│ @ ~/.julia/packages/Pipelines/5Y6rI/test/runtests.jl:439 [inlined]
│ [9] macro expansion
│ @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:767 [inlined]
│ [10] macro expansion
│ @ ~/.julia/packages/Pipelines/5Y6rI/test/runtests.jl:439 [inlined]
│ [11] macro expansion
│ @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1582 [inlined]
│ [12] top-level scope
│ @ ~/.julia/packages/Pipelines/5Y6rI/test/runtests.jl:8
│ [13] include(fname::String)
│ @ Base.MainInclude ./client.jl:487
│ [14] top-level scope
│ @ none:6
│ [15] eval
│ @ ./boot.jl:385 [inlined]
│ [16] exec_options(opts::Base.JLOptions)
│ @ Base ./client.jl:289
│ [17] _start()
│ @ Base ./client.jl:550
└ @ Pipelines ~/.julia/packages/Pipelines/5Y6rI/src/Program.jl:313
┌ Warning: Retry Command Program (1/1)
└ @ Pipelines ~/.julia/packages/Pipelines/5Y6rI/src/Program.jl:300
[ Info: 2026-02-04 05:23:27 Started: Command Program [5bfa9ca1-6585-4a4e-80c9-2736b08b23a6]
ERROR: unknown option `--abcdefg`
┌ Error: 2026-02-04 05:23:27 ProgramRunningError: Command Program: fail to run the main command.
│ prerequisites = do_nothing (generic function with 3 methods)
│ command_running = `julia --abcdefg`
│ run_id = UUID("5bfa9ca1-6585-4a4e-80c9-2736b08b23a6")
│ inputs = Dict{String, Any}()
└ outputs = Dict{String, Any}()
[ Info: 2026-02-04 05:23:28 Started: Echo [a141cf0b-cc4e-57fc-b7ed-ba6dee9f0683]
x = Dict{String, Any}("optional_arg" => 5, "optional_arg2" => 0.5, "input2" => 33, "input1" => :xxx)
y = Dict{String, Any}("output" => "iout")
[ Info: 2026-02-04 05:23:28 Finished: Echo [a141cf0b-cc4e-57fc-b7ed-ba6dee9f0683]
[ Info: 2026-02-04 05:23:28 Started: Echo [a141cf0b-cc4e-57fc-b7ed-ba6dee9f0683]
x = Dict{String, Any}("optional_arg" => 5, "optional_arg2" => 0.5, "input2" => 33, "input1" => :xxx)
y = Dict{String, Any}("output" => "iout")
[ Info: 2026-02-04 05:23:28 Finished: Echo [a141cf0b-cc4e-57fc-b7ed-ba6dee9f0683]
┌ Info: 2026-02-04 05:23:29 Started: Command Program
│ command_template = `echo input input2 optional_arg optional_arg2 output`
│ run_id = UUID("d73fdd2c-5c42-5aec-b1f5-bce033712730")
│ inputs = Dict{String, Any} with 4 entries: …
└ outputs = Dict{String, Any} with 1 entry: …
in1 2 5 0.5 out
┌ Info: 2026-02-04 05:23:29 Finished: Command Program
│ command_running = `echo in1 2 5 0.5 out`
│ run_id = UUID("d73fdd2c-5c42-5aec-b1f5-bce033712730")
│ inputs = Dict{String, Any} with 4 entries: …
└ outputs = Dict{String, Any} with 1 entry: …
┌ Info: 2026-02-04 05:23:29 Started: Julia Program
│ run_id = UUID("3fbac19c-88ef-594a-91a0-b2b0f1fe899d")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "b" => 2
│ "a" => `in1`
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "c" => "out"
inputs are `in1` and 2
You can also use info in outputs: out
The returned value will be assigned to a new outputs
┌ Info: 2026-02-04 05:23:29 Finished: Julia Program
│ run_id = UUID("3fbac19c-88ef-594a-91a0-b2b0f1fe899d")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "b" => 2
│ "a" => `in1`
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "c" => 4
┌ Info: 2026-02-04 05:23:30 Started: Julia Program
│ run_id = UUID("4166314e-1eae-5081-b0f4-865c857000ff")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "B" => 5
│ "A" => 3
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "OUT" => 8
inputs["A"] = 3
inputs = Dict{String, Any}("B" => 5, "A" => 3)
inputs["A"] = 3
inputs["B"] = 5
inputs["OUT"] = 8
┌ Info: 2026-02-04 05:23:30 Finished: Julia Program
│ run_id = UUID("4166314e-1eae-5081-b0f4-865c857000ff")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "B" => 5
│ "A" => 3
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "OUT" => 8
┌ Info: 2026-02-04 05:23:31 Started: Test v0.9 Rerun
│ run_id = UUID("2177ddd3-1b88-5693-997a-afd6b404e58c")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "add" => 3
│ "infile" => "in.txt"
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "outfile" => "in.txt.out"
┌ Info: 2026-02-04 05:23:31 Finished: Test v0.9 Rerun
│ run_id = UUID("2177ddd3-1b88-5693-997a-afd6b404e58c")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "add" => 3
│ "infile" => "in.txt"
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "outfile" => "in.txt.out"
┌ Info: 2026-02-04 05:23:31 Started: Test v0.9 Rerun
│ run_id = UUID("b1f38872-73a6-53d4-8cf1-700e4a15d8b0")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "add" => 5
│ "infile" => "in.txt"
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "outfile" => "in.txt.out"
┌ Info: 2026-02-04 05:23:31 Finished: Test v0.9 Rerun
│ run_id = UUID("b1f38872-73a6-53d4-8cf1-700e4a15d8b0")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "add" => 5
│ "infile" => "in.txt"
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "outfile" => "in.txt.out"
┌ Info: 2026-02-04 05:23:31 Started: Test v0.9 Rerun
│ run_id = UUID("2177ddd3-1b88-5693-997a-afd6b404e58c")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "add" => 3
│ "infile" => "in.txt"
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "outfile" => "in.txt.out"
┌ Info: 2026-02-04 05:23:31 Finished: Test v0.9 Rerun
│ run_id = UUID("2177ddd3-1b88-5693-997a-afd6b404e58c")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "add" => 3
│ "infile" => "in.txt"
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "outfile" => "in.txt.out"
┌ Info: 2026-02-04 05:23:31 Started: Test v0.9 Rerun
│ run_id = UUID("2177ddd3-1b88-5693-997a-afd6b404e58c")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "add" => 3
│ "infile" => "in.txt"
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "outfile" => "in.txt.out"
┌ Info: 2026-02-04 05:23:31 Finished: Test v0.9 Rerun
│ run_id = UUID("2177ddd3-1b88-5693-997a-afd6b404e58c")
│ inputs =
│ Dict{String, Any} with 2 entries:
│ "add" => 3
│ "infile" => "in.txt"
│ outputs =
│ Dict{String, Any} with 1 entry:
└ "outfile" => "in.txt.out"
abc = 2
def = 33
┌ Info: 2026-02-04 05:23:31 Started: Program Cmd
│ run_id = UUID("b6313cce-f3d9-50da-b53b-73e0886ee433")
│ inputs =
│ Dict{String, Any} with 1 entry:
│ "CMD" => `echo 123 456`
└ outputs = Dict{String, Any}()
123 456
┌ Info: 2026-02-04 05:23:31 Finished: Program Cmd
│ run_id = UUID("b6313cce-f3d9-50da-b53b-73e0886ee433")
│ inputs =
│ Dict{String, Any} with 1 entry:
│ "CMD" => `echo 123 456`
└ outputs = Dict{String, Any}()
┌ Info: 2026-02-04 05:23:32 Started: Program Cmd
│ run_id = UUID("9d44a59a-15fc-5707-b773-9c3c464d74d1")
│ inputs =
│ Dict{String, Any} with 1 entry:
│ "CMD" => pipeline(`echo 123 456`, stdout>FileRedirect("123456.txt", fals…
└ outputs = Dict{String, Any}()
┌ Info: 2026-02-04 05:23:32 Finished: Program Cmd
│ run_id = UUID("9d44a59a-15fc-5707-b773-9c3c464d74d1")
│ inputs =
│ Dict{String, Any} with 1 entry:
│ "CMD" => pipeline(`echo 123 456`, stdout>FileRedirect("123456.txt", fals…
└ outputs = Dict{String, Any}()
┌ Info: 2026-02-04 05:23:33 Started: Program Cmd
│ run_id = UUID("ccb87820-0bb1-5d02-8488-3b167b421716")
│ inputs =
│ Dict{String, Any} with 1 entry:
│ "CMD" => `echo 123456.txt`
└ outputs = Dict{String, Any}()
123456.txt
┌ Info: 2026-02-04 05:23:33 Finished: Program Cmd
│ run_id = UUID("ccb87820-0bb1-5d02-8488-3b167b421716")
│ inputs =
│ Dict{String, Any} with 1 entry:
│ "CMD" => `echo 123456.txt`
└ outputs = Dict{String, Any}()
┌ Info: 2026-02-04 05:23:33 Started: Program Cmd
│ run_id = UUID("f8c3a5f8-4fcc-5ae5-a0ad-18944229c09a")
│ inputs =
│ Dict{String, Any} with 1 entry:
│ "CMD" => `echo -J=123456.txt,123.txt`
└ outputs = Dict{String, Any}()
-J=123456.txt,123.txt
┌ Info: 2026-02-04 05:23:33 Finished: Program Cmd
│ run_id = UUID("f8c3a5f8-4fcc-5ae5-a0ad-18944229c09a")
│ inputs =
│ Dict{String, Any} with 1 entry:
│ "CMD" => `echo -J=123456.txt,123.txt`
└ outputs = Dict{String, Any}()
┌ Info: 2026-02-04 05:23:33 Started: Program Cmd
│ run_id = UUID("88682a3e-7c8e-508d-afe8-a43515a318a5")
│ inputs =
│ Dict{String, Any} with 1 entry:
│ "CMD" => `echo 123456.txt,123.txt`
└ outputs = Dict{String, Any}()
123456.txt,123.txt
┌ Info: 2026-02-04 05:23:33 Finished: Program Cmd
│ run_id = UUID("88682a3e-7c8e-508d-afe8-a43515a318a5")
│ inputs =
│ Dict{String, Any} with 1 entry:
│ "CMD" => `echo 123456.txt,123.txt`
└ outputs = Dict{String, Any}()
123456.txt,123.txt
stdout = ScopedStream(ScopedValues.ScopedValue{IO}(Base.PipeEndpoint(RawFD(12) open, 0 bytes waiting)))
stderr = ScopedStream(ScopedValues.ScopedValue{IO}(Base.PipeEndpoint(RawFD(14) open, 0 bytes waiting)))
┌ Info: 2026-02-04 05:23:35 Started: Command Program
│ command_template = pipeline(`echo 123`, stdout>Base.FileRedirect("out2.txt", false))
│ run_id = UUID("a0e80efd-935f-559d-8d8d-d1ec4799ad6d")
│ inputs = Dict{String, Any} with 2 entries: …
└ outputs = Dict{String, Any} with 1 entry: …
┌ Info: 2026-02-04 05:23:35 Finished: Command Program
│ command_running = pipeline(`echo 123`, stdout>Base.FileRedirect("out2.txt", false))
│ run_id = UUID("a0e80efd-935f-559d-8d8d-d1ec4799ad6d")
│ inputs = Dict{String, Any} with 2 entries: …
└ outputs = Dict{String, Any} with 1 entry: …
stdout = ScopedStream(ScopedValues.ScopedValue{IO}(Base.PipeEndpoint(RawFD(12) open, 0 bytes waiting)))
stderr = ScopedStream(ScopedValues.ScopedValue{IO}(Base.PipeEndpoint(RawFD(14) open, 0 bytes waiting)))
Test Summary: | Pass Total Time
test set | 170 170 32.5s
Testing Pipelines tests passed
Testing completed after 36.68s
PkgEval succeeded after 67.88s