Package evaluation of TreeRecipe on Julia 1.13.0-DEV.791 (d5209bd37d*) started at 2025-07-04T12:37:28.492 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 7.72s ################################################################################ # Installation # Installing TreeRecipe... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [1fa7448c] + TreeRecipe v0.2.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [1520ce14] + AbstractTrees v0.4.5 [ec485272] + ArnoldiMethod v0.4.0 [34da2185] + Compat v4.17.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [411431e0] + Extents v0.1.6 [68eda718] + GeoFormatTypes v0.4.4 [cf35fbd7] + GeoInterface v1.4.1 [5c1252a2] + GeometryBasics v0.5.9 [86223c79] + Graphs v1.13.0 [d25df0c9] + Inflate v0.1.5 [c8e1da08] + IterTools v1.10.0 [692b3bcd] + JLLWrappers v1.7.0 [1914dd2f] + MacroTools v0.5.16 [46757867] + NetworkLayout v0.4.10 [bac558e1] + OrderedCollections v1.8.1 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [3cdcf5f2] + RecipesBase v1.3.4 [ae029012] + Requires v1.3.1 [699a6c99] + SimpleTraits v0.9.4 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [1fa7448c] + TreeRecipe v0.2.0 [5ae413db] + EarCut_jll v2.2.4+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.14.1+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.0+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Installation completed after 3.53s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ERROR: LoadError: The following 1 direct dependency failed to precompile: BetaML Failed to precompile BetaML [024491cd-cc6b-443e-8034-08ea7eb7db2b] to "/home/pkgeval/.julia/compiled/v1.13/BetaML/jl_v19x1z" (ProcessExited(1)). [ Info: Beginning BetaML PrecompileTool workflow.... ERROR: LoadError: MethodError: objects of type Module are not callable. In case you did not try calling it explicitly, check if a Module has been passed as an argument to a method that expects a callable instead. The object of type `Module` exists, but no method is defined for this combination of argument types when trying to treat it as a callable object. Stacktrace: [1] backward(layer::BetaML.Nn.VectorFunctionLayer{0, typeof(BetaML.Utils.softmax), typeof(BetaML.Utils.dsoftmax), Nothing, Float64}, x::Vector{Float64}, next_gradient::Vector{Float64}) @ BetaML.Nn ~/.julia/packages/BetaML/3Lb3h/src/Nn/default_layers/VectorFunctionLayer.jl:102 [2] get_gradient(nn::BetaML.Nn.NN, x::Vector{Float64}, y::Vector{Bool}) @ BetaML.Nn ~/.julia/packages/BetaML/3Lb3h/src/Nn/Nn.jl:493 [3] get_batchgradient(nn::BetaML.Nn.NN, xbatch::Matrix{Float64}, ybatch::Matrix{Bool}) @ BetaML.Nn ~/.julia/packages/BetaML/3Lb3h/src/Nn/Nn.jl:530 [4] macro expansion @ ~/.julia/packages/BetaML/3Lb3h/src/Nn/Nn.jl:718 [inlined] [5] macro expansion @ ~/.julia/packages/ProgressMeter/kniaW/src/ProgressMeter.jl:1021 [inlined] [6] train!(nn::BetaML.Nn.NN, x::Matrix{Float64}, y::Matrix{Bool}; epochs::Int64, batch_size::Int64, sequential::Bool, nepochs_ran::Int64, verbosity::BetaML.Api.Verbosity, cb::typeof(BetaML.Nn.fitting_info), onfail::String, fail_epoch::Int64, fail_threshold::Float64, opt_alg::BetaML.Nn.ADAM, rng::Random.TaskLocalRNG) @ BetaML.Nn ~/.julia/packages/BetaML/3Lb3h/src/Nn/Nn.jl:703 [7] fit!(m::BetaML.Nn.NeuralNetworkEstimator, X::Matrix{Float64}, Y::Matrix{Bool}) @ BetaML.Nn ~/.julia/packages/BetaML/3Lb3h/src/Nn/Nn.jl:1174 [8] macro expansion @ ~/.julia/packages/BetaML/3Lb3h/src/Precompilation.jl:13 [inlined] [9] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [10] macro expansion @ ~/.julia/packages/BetaML/3Lb3h/src/Precompilation.jl:7 [inlined] [11] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [12] top-level scope @ ~/.julia/packages/BetaML/3Lb3h/src/Precompilation.jl:118 [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [14] top-level scope @ ~/.julia/packages/BetaML/3Lb3h/src/BetaML.jl:78 [15] include(mod::Module, _path::String) @ Base ./Base.jl:309 [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3000 [17] top-level scope @ stdin:5 [18] eval(m::Module, e::Any) @ Core ./boot.jl:489 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [20] include_string @ ./loading.jl:2856 [inlined] [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [22] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/BetaML/3Lb3h/src/Precompilation.jl:1 in expression starting at /home/pkgeval/.julia/packages/BetaML/3Lb3h/src/BetaML.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 142.99s ################################################################################ # Testing # Testing TreeRecipe Status `/tmp/jl_H5qyni/Project.toml` [024491cd] BetaML v0.12.2 [7806a523] DecisionTree v0.12.4 [91a5bcdd] Plots v1.40.16 [1fa7448c] TreeRecipe v0.2.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_H5qyni/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.19.0 [024491cd] BetaML v0.12.2 [d1d4a3ce] BitFlags v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] CPUSummary v0.2.6 [324d7699] CategoricalArrays v0.10.8 [082447d4] ChainRules v1.72.5 [d360d2e6] ChainRulesCore v1.25.2 [fb6a15b2] CloseOpenIntervals v0.1.13 [944b1d66] CodecZlib v0.7.8 [35d6a980] ColorSchemes v3.29.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [861a8166] Combinatorics v1.0.3 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.17.0 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.6.0 [d38c429a] 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v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.14.1+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.0+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... 10724.1 ms ✓ NetworkLayout 5284.8 ms ✓ NetworkLayout → NetworkLayoutGraphsExt 7848.9 ms ✓ TreeRecipe 3 dependencies successfully precompiled in 24 seconds. 60 already precompiled. Precompiling packages... 21436.8 ms ✓ Plots → GeometryBasicsExt 1 dependency successfully precompiled in 23 seconds. 190 already precompiled. Test Summary: | Total Time visual test | 0 27.1s [ Info: -- create layout of tree [ Info: -- extract tree levels [ Info: -- check layout structure Test Summary: | Pass Total Time structural test | 6 6 3.5s Testing TreeRecipe tests passed Testing completed after 117.68s PkgEval succeeded after 311.86s