Package evaluation of Sleipnir on Julia 1.13.0-DEV.791 (d5209bd37d*) started at 2025-07-05T00:21:08.203 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 7.66s ################################################################################ # Installation # Installing Sleipnir... Resolving package versions... Installed Sleipnir ─ v0.10.1 Updating `~/.julia/environments/v1.13/Project.toml` [f5e6c550] + Sleipnir v0.10.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.3.0 [35492f91] + AdaptivePredicates v1.2.0 [66dad0bd] + AliasTables v1.1.3 [27a7e980] + Animations v0.4.2 [4fba245c] + ArrayInterface v7.19.0 [67c07d97] + Automa v1.1.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.7 [18cc8868] + BaseDirs v1.3.1 [6e4b80f9] + BenchmarkTools v1.6.0 [d1d4a3ce] + BitFlags v0.1.9 [fa961155] + CEnum v0.5.0 ⌅ [179af706] + CFTime v0.1.4 [96374032] + CRlibm v1.0.2 [336ed68f] + CSV v0.10.15 [159f3aea] + Cairo v1.1.1 ⌅ [13f3f980] + CairoMakie v0.13.10 [082447d4] + ChainRules v1.72.5 [d360d2e6] + ChainRulesCore v1.25.2 [da1fd8a2] + CodeTracking v1.3.9 [944b1d66] + CodecZlib v0.7.8 [a2cac450] + ColorBrewer v0.4.1 [35d6a980] + ColorSchemes v3.29.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [1fbeeb36] + CommonDataModel v0.3.8 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.17.0 [b0b7db55] + ComponentArrays v0.15.28 [f0e56b4a] + ConcurrentUtilities v2.5.0 [187b0558] + ConstructionBase v1.6.0 [d38c429a] + Contour v0.6.3 ⌅ [b46f11dc] + CoordRefSystems v0.17.7 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [44557152] + DateFormats v0.1.19 [927a84f5] + DelaunayTriangulation v1.6.4 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [0703355e] + DimensionalData v0.29.18 [3c3547ce] + DiskArrays v0.4.13 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [429591f6] + ExactPredicates v2.2.8 [460bff9d] + ExceptionUnwrapping v0.1.11 [411431e0] + Extents v0.1.6 [7a1cc6ca] + FFTW v1.9.0 [bf96fef3] + FieldMetadata v0.3.1 [5789e2e9] + FileIO v1.17.0 ⌅ [8fc22ac5] + FilePaths v0.8.3 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.13.0 [53c48c17] + FixedPointNumbers v0.8.5 [4c728ea3] + Flatten v0.4.3 [1fa38f19] + Format v1.3.7 [f6369f11] + ForwardDiff v1.0.1 [b38be410] + FreeType v4.1.1 [663a7486] + FreeTypeAbstraction v0.10.8 [d9f16b24] + Functors v0.5.2 [46192b85] + GPUArraysCore v0.2.0 [28b8d3ca] + GR v0.73.17 [68eda718] + GeoFormatTypes v0.4.4 [cf35fbd7] + GeoInterface v1.4.1 [5c1252a2] + GeometryBasics v0.5.9 [05efe853] + GeometryOpsCore v0.1.7 [a2bd30eb] + Graphics v1.1.3 [3955a311] + GridLayoutBase v0.11.1 [42e2da0e] + Grisu v1.0.2 [f67ccb44] + HDF5 v0.17.2 [cd3eb016] + HTTP v1.10.17 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [7869d1d1] + IRTools v0.4.15 [615f187c] + IfElse v0.1.1 [2803e5a7] + ImageAxes v0.6.12 [c817782e] + ImageBase v0.1.7 [a09fc81d] + ImageCore v0.10.5 [82e4d734] + ImageIO v0.6.9 [d8c32880] 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Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 11.89s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ERROR: LoadError: The following 2 direct dependencies failed to precompile: JETReviseExt Failed to precompile JETReviseExt [2aef84f2-cbf0-5914-a30c-17dec84eac93] to "/home/pkgeval/.julia/compiled/v1.13/JETReviseExt/jl_A4olrA" (ProcessExited(1)). WARNING: Imported binding Compiler.istopfunction was undeclared at import time during import to JET. ERROR: LoadError: UndefVarError: `LineInfoNode` not defined in `JET` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ ~/.julia/packages/JET/yNWjn/src/JETBase.jl:202 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [3] top-level scope @ ~/.julia/packages/JET/yNWjn/src/JET.jl:36 [4] include(mod::Module, _path::String) @ Base ./Base.jl:309 [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3000 [6] top-level scope @ stdin:5 [7] eval(m::Module, e::Any) @ Core ./boot.jl:489 [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [9] include_string @ ./loading.jl:2856 [inlined] [10] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [11] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/JET/yNWjn/src/JETBase.jl:202 in expression starting at /home/pkgeval/.julia/packages/JET/yNWjn/src/JET.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile JET [c3a54625-cd67-489e-a8e7-0a5a0ff4e31b] to "/home/pkgeval/.julia/compiled/v1.13/JET/jl_xP3vuT" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3287 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2652 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#232 @ ./reflection.jl:1282 [inlined] [8] invokelatest_gr @ ./reflection.jl:1274 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3858 [10] maybe_cachefile_lock @ ./loading.jl:3855 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2638 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2466 [13] macro expansion @ ./loading.jl:2394 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2359 [16] require @ ./loading.jl:2335 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) @ Base ./module.jl:101 [20] top-level scope @ ~/.julia/packages/JET/yNWjn/ext/JETReviseExt.jl:3 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3000 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [26] include_string @ ./loading.jl:2856 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [28] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/JET/yNWjn/ext/JETReviseExt.jl:1 in expression starting at stdin:5 JET Failed to precompile JET [c3a54625-cd67-489e-a8e7-0a5a0ff4e31b] to "/home/pkgeval/.julia/compiled/v1.13/JET/jl_XcYf9d" (ProcessExited(1)). WARNING: Imported binding Compiler.istopfunction was undeclared at import time during import to JET. ERROR: LoadError: UndefVarError: `LineInfoNode` not defined in `JET` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ ~/.julia/packages/JET/yNWjn/src/JETBase.jl:202 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [3] top-level scope @ ~/.julia/packages/JET/yNWjn/src/JET.jl:36 [4] include(mod::Module, _path::String) @ Base ./Base.jl:309 [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3000 [6] top-level scope @ stdin:5 [7] eval(m::Module, e::Any) @ Core ./boot.jl:489 [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [9] include_string @ ./loading.jl:2856 [inlined] [10] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [11] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/JET/yNWjn/src/JETBase.jl:202 in expression starting at /home/pkgeval/.julia/packages/JET/yNWjn/src/JET.jl:1 in expression starting at stdin:5 in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 1468.67s ################################################################################ # Testing # Testing Sleipnir Status `/tmp/jl_CWJNyX/Project.toml` [6e4b80f9] BenchmarkTools v1.6.0 [336ed68f] CSV v0.10.15 ⌅ [13f3f980] CairoMakie v0.13.10 [944b1d66] CodecZlib v0.7.8 [b0b7db55] ComponentArrays v0.15.28 ⌅ [b46f11dc] CoordRefSystems v0.17.7 [864edb3b] DataStructures v0.18.22 [44557152] DateFormats v0.1.19 [0703355e] DimensionalData v0.29.18 [28b8d3ca] GR v0.73.17 [f67ccb44] HDF5 v0.17.2 [a09fc81d] ImageCore v0.10.5 [d8c32880] ImageInTerminal v0.5.4 [5903a43b] Infiltrator v1.9.2 ⌅ [c3a54625] JET v0.9.19 [033835bb] JLD2 v0.5.15 [682c06a0] JSON v0.21.4 [85f8d34a] NCDatasets v0.14.8 [510215fc] Observables v0.5.5 [a3a2b9e3] Rasters v0.14.5 ⌃ [295af30f] Revise v3.7.5 [f5e6c550] Sleipnir v0.10.1 [10745b16] Statistics v1.11.1 [1986cc42] Unitful v1.23.1 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_CWJNyX/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.3.0 [35492f91] AdaptivePredicates v1.2.0 [66dad0bd] AliasTables v1.1.3 [27a7e980] Animations v0.4.2 [4fba245c] ArrayInterface v7.19.0 [67c07d97] Automa v1.1.0 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.7 [18cc8868] BaseDirs v1.3.1 [6e4b80f9] BenchmarkTools v1.6.0 [d1d4a3ce] BitFlags v0.1.9 [fa961155] CEnum v0.5.0 ⌅ [179af706] CFTime v0.1.4 [96374032] CRlibm v1.0.2 [336ed68f] CSV v0.10.15 [159f3aea] Cairo v1.1.1 ⌅ [13f3f980] CairoMakie v0.13.10 [082447d4] ChainRules v1.72.5 [d360d2e6] ChainRulesCore v1.25.2 [da1fd8a2] CodeTracking v1.3.9 [944b1d66] CodecZlib v0.7.8 [a2cac450] ColorBrewer v0.4.1 [35d6a980] ColorSchemes v3.29.0 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v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.14.1+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.0+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Activating project at `~/.julia/packages/Sleipnir/RuqUQ` [ Info: Downloading preprocessed data [ Info: Downloading RGI stats from Bremen cluster ERROR: LoadError: ArgumentError: Package JET [c3a54625-cd67-489e-a8e7-0a5a0ff4e31b] is required but does not seem to be installed: - Run `Pkg.instantiate()` to install all recorded dependencies. Stacktrace: [1] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2588 [2] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2466 [3] macro expansion @ ./loading.jl:2394 [inlined] [4] macro expansion @ ./lock.jl:376 [inlined] [5] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2359 [6] require @ ./loading.jl:2335 [inlined] [7] eval_import_path @ ./module.jl:36 [inlined] [8] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [9] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [10] top-level scope @ ~/.julia/packages/Sleipnir/RuqUQ/test/runtests.jl:18 [11] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [12] top-level scope @ none:6 [13] eval(m::Module, e::Any) @ Core ./boot.jl:489 [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:290 [15] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/Sleipnir/RuqUQ/test/runtests.jl:18 Testing failed after 176.51s ERROR: LoadError: Package Sleipnir errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2423 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2278 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:500 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:164 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [7] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:151 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:309 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:324 [12] _start() @ Base ./client.jl:557 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 1693.28s: package fails to precompile