Package evaluation of QuantumESPRESSOExpress on Julia 1.13.0-DEV.791 (d5209bd37d*) started at 2025-07-04T18:41:07.643 ################################################################################ # Set-up # Set-up completed after 0.21s ################################################################################ # Installation # Installing QuantumESPRESSOExpress... Resolving package versions... Installed Conda ─────────────────── v1.10.2 Installed QuantumESPRESSOCommands ─ v0.6.4 Installed PyCall ────────────────── v1.96.4 Updating `~/.julia/environments/v1.13/Project.toml` [524a00d3] + QuantumESPRESSOExpress v0.5.9 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.15.0 ⌅ [df5135bc] + AbInitioSoftwareBase v0.6.5 [6b84a0a3] + AcuteML v0.11.3 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.19.0 [861a8166] + Combinatorics v1.0.3 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [863f3e99] + Comonicon v1.0.8 [34da2185] + Compat v4.17.0 [8f4d0f93] + Conda v1.10.2 [5218b696] + Configurations v0.17.6 [187b0558] + ConstructionBase v1.6.0 [150eb455] + CoordinateTransformations v0.6.4 [5a653867] + Counters v0.3.4 [a8cc5b0e] + Crayons v4.1.1 ⌅ [3bff3928] + Crystallography v0.5.1 ⌅ [93b1d1cd] + CrystallographyBase v0.5.2 [9a962f9c] + DataAPI v1.16.0 ⌃ [a93c6f00] + DataFrames v1.3.6 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.1 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [0438fec6] + EquationsOfState v4.0.0 [1eaa2786] + EquationsOfStateOfSolids v0.4.2 [b12df14e] + Express v0.9.2 [55351af7] + ExproniconLite v0.10.14 [8f5d6c58] + EzXML v1.2.1 [5789e2e9] + FileIO v1.17.0 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [59287772] + Formatting v0.4.3 ⌅ [f6369f11] + ForwardDiff v0.10.38 ⌅ [d9f16b24] + Functors v0.2.8 [c27321d9] + Glob v1.3.1 [86223c79] + Graphs v1.13.0 [34004b35] + HypergeometricFunctions v0.3.28 [d25df0c9] + Inflate v0.1.5 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [ceb4388c] + IsURL v0.2.0 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] + JLD2 v0.4.54 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [2ab3a3ac] + LogExpFunctions v0.3.29 ⌅ [2fda8390] + LsqFit v0.12.1 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [87e2bd06] + OptimBase v2.0.2 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [9b87118b] + PackageCompiler v2.2.1 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [7b2266bf] + PeriodicTable v1.2.1 [3a141323] + PolynomialRoots v1.0.0 ⌅ [f27b6e38] + Polynomials v3.2.13 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 ⌅ [08abe8d2] + PrettyTables v1.3.1 [1b2dc2e6] + Pseudopotentials v0.8.1 [43287f4e] + PtrArrays v1.3.0 [438e738f] + PyCall v1.96.4 [e44308e6] + PyFortran90Namelists v0.1.0 [5a1273f0] + PyQHA v0.1.1 [1fd47b50] + QuadGK v2.11.2 ⌅ [95228164] + QuantumESPRESSO v0.8.1 ⌅ [51b62caa] + QuantumESPRESSOBase v0.7.8 ⌅ [f713baf6] + QuantumESPRESSOCommands v0.6.4 [524a00d3] + QuantumESPRESSOExpress v0.5.9 ⌅ [a4e7ca57] + QuantumESPRESSOFormatter v0.3.9 ⌅ [a780ab42] + QuantumESPRESSOParser v0.3.12 [cbbcb084] + ReadableRegex v0.3.2 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 ⌅ [f2b01f46] + Roots v1.2.0 [6c6a2e73] + Scratch v1.3.0 [efcf1570] + Setfield v1.1.2 [699a6c99] + SimpleTraits v0.9.4 ⌅ [6a97d125] + SimpleWorkflows v0.16.2 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.1 ⌅ [f761d5c5] + Spglib v0.5.3 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 ⌅ [2913bbd2] + StatsBase v0.33.21 [4c63d2b9] + StatsFuns v1.5.0 [69024149] + StringEncodings v0.3.7 ⌅ [4093c41a] + StructHelpers v0.1.5 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3bb67fe8] + TranscodingStreams v0.11.3 [410a4b4d] + Tricks v0.1.10 [0ca489f0] + TryCatch v0.1.1 [0fb2cfb0] + TypeTransform v0.1.3 [3a884ed6] + UnPack v1.0.2 [8030dd95] + UnifiedPseudopotentialFormat v0.4.1 [1986cc42] + Unitful v1.23.1 [a7773ee8] + UnitfulAtomic v1.0.0 [81def892] + VersionParsing v1.3.0 [ddb6d928] + YAML v0.4.14 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 ⌅ [02c8fc9c] + XML2_jll v2.13.6+1 ⌅ [ac4a9f1e] + spglib_jll v1.16.5+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.14.1+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.0+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building Conda ──────────────────→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log` Building PyCall ─────────────────→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Building QuantumESPRESSOCommands → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/912cf2dc86d82cdf8c7f4524644969065118a407/build.log` Installation completed after 134.33s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... ✗ TryCatch ✗ Polynomials 48394.0 ms ✓ DataFrames ✗ JLD2 2378.4 ms ✓ Spglib 10620.8 ms ✓ AcuteML 22548.8 ms ✓ QuantumESPRESSOCommands ✗ EquationsOfStateOfSolids ✗ SimpleWorkflows 5510.9 ms ✓ CrystallographyBase ✗ UnifiedPseudopotentialFormat ✗ Express 7510.1 ms ✓ Crystallography 24066.4 ms ? QuantumESPRESSOBase 8182.8 ms ? QuantumESPRESSOParser 57024.0 ms ? QuantumESPRESSOFormatter 7967.7 ms ? QuantumESPRESSO 12750.2 ms ? QuantumESPRESSOExpress 6 dependencies successfully precompiled in 414 seconds. 168 already precompiled. 5 dependencies failed but may be precompilable after restarting julia 6 dependencies had output during precompilation: ┌ QuantumESPRESSOParser │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ QuantumESPRESSOBase │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ QuantumESPRESSOExpress │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ DataFrames │ WARNING: method definition for #DataFrame#200 at /home/pkgeval/.julia/packages/DataFrames/JZ7x5/src/dataframe/dataframe.jl:397 declares type variable T but does not use it. │ WARNING: method definition for col_ordering at /home/pkgeval/.julia/packages/DataFrames/JZ7x5/src/abstractdataframe/sort.jl:145 declares type variable O but does not use it. └ ┌ QuantumESPRESSO │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ QuantumESPRESSOFormatter │ [ Info: Installing f90nml via the Conda f90nml package... │ [ Info: Running `conda config --add channels conda-forge --file /home/pkgeval/.julia/conda/3/x86_64/condarc-julia.yml --force` in root environment │ /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.9. │ │ To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: │ │ conda config --add channels defaults │ │ For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html │ │ deprecated.topic( │ [ Info: Running `conda install -q -y f90nml` in root environment │ Channels: │ - conda-forge │ - defaults │ Platform: linux-64 │ Collecting package metadata (repodata.json): ...working... done │ Solving environment: ...working... done │ │ ## Package Plan ## │ │ environment location: /home/pkgeval/.julia/conda/3/x86_64 │ │ added / updated specs: │ - f90nml │ │ │ The following packages will be downloaded: │ │ package | build │ ---------------------------|----------------- │ f90nml-1.4.4 | pyhd8ed1ab_1 33 KB conda-forge │ ------------------------------------------------------------ │ Total: 33 KB │ │ The following NEW packages will be INSTALLED: │ │ f90nml conda-forge/noarch::f90nml-1.4.4-pyhd8ed1ab_1 │ │ │ Preparing transaction: ...working... done │ Verifying transaction: ...working... done │ Executing transaction: ...working... done │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ Precompilation completed after 415.9s ################################################################################ # Loading # Loading QuantumESPRESSOExpress... Precompiling packages... ✗ TryCatch ✗ Polynomials ✗ JLD2 5982.8 ms ? QuantumESPRESSOBase ✗ EquationsOfStateOfSolids ✗ SimpleWorkflows ✗ UnifiedPseudopotentialFormat 7074.6 ms ? QuantumESPRESSOParser ✗ Express 12019.2 ms ? QuantumESPRESSOFormatter 6643.1 ms ? QuantumESPRESSO Info Given QuantumESPRESSOExpress was explicitly requested, output will be shown live  WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 12616.1 ms ? QuantumESPRESSOExpress 0 dependencies successfully precompiled in 230 seconds. 174 already precompiled. 5 dependencies failed but may be precompilable after restarting julia 5 dependencies had output during precompilation: ┌ QuantumESPRESSOParser │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ QuantumESPRESSOBase │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ QuantumESPRESSOExpress │ [Output was shown above] └ ┌ QuantumESPRESSO │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ QuantumESPRESSOFormatter │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. Precompiling packages... 22003.6 ms ✓ QuantumESPRESSOCommands 6119.8 ms ? QuantumESPRESSOBase 8163.1 ms ? QuantumESPRESSOParser 12202.9 ms ? QuantumESPRESSOFormatter Info Given QuantumESPRESSO was explicitly requested, output will be shown live  WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 6540.0 ms ? QuantumESPRESSO 1 dependency successfully precompiled in 58 seconds. 104 already precompiled. 4 dependencies failed but may be precompilable after restarting julia 4 dependencies had output during precompilation: ┌ QuantumESPRESSOParser │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ QuantumESPRESSOBase │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ QuantumESPRESSO │ [Output was shown above] └ ┌ QuantumESPRESSOFormatter │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. Precompiling packages... Info Given QuantumESPRESSOBase was explicitly requested, output will be shown live  WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 6071.9 ms ? QuantumESPRESSOBase WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. WARNING: Detected access to binding `QuantumESPRESSOBase.Inputs` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Imported binding Inputs.groupname was undeclared at import time during import to Inputs. Precompiling packages... 6008.0 ms ? QuantumESPRESSOBase Info Given QuantumESPRESSOParser was explicitly requested, output will be shown live  ┌ Warning: Module QuantumESPRESSOBase with build ID ffffffff-ffff-ffff-43f8-20e1bf332f3d is missing from the cache. │ This may mean QuantumESPRESSOBase [51b62caa-b28f-11e9-38c2-1f67cb498e05] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2614 1532.2 ms ? QuantumESPRESSOParser ┌ Warning: Module QuantumESPRESSOBase with build ID ffffffff-ffff-ffff-43f8-20e1bf332f3d is missing from the cache. │ This may mean QuantumESPRESSOBase [51b62caa-b28f-11e9-38c2-1f67cb498e05] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2614 WARNING: Detected access to binding `QuantumESPRESSOParser.Inputs` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. Precompiling packages... 6329.1 ms ? QuantumESPRESSOBase 1475.2 ms ? QuantumESPRESSOParser Info Given QuantumESPRESSOFormatter was explicitly requested, output will be shown live  ┌ Warning: Module QuantumESPRESSOBase with build ID ffffffff-ffff-ffff-43f8-20e1bf332f3d is missing from the cache. │ This may mean QuantumESPRESSOBase [51b62caa-b28f-11e9-38c2-1f67cb498e05] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2614 4799.4 ms ? QuantumESPRESSOFormatter ┌ Warning: Module QuantumESPRESSOBase with build ID ffffffff-ffff-ffff-43f8-20e1bf332f3d is missing from the cache. │ This may mean QuantumESPRESSOBase [51b62caa-b28f-11e9-38c2-1f67cb498e05] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2614 WARNING: Imported binding QuantumESPRESSOBase.QuantumESPRESSOInput was undeclared at import time during import to QuantumESPRESSOFormatter. WARNING: Imported binding QuantumESPRESSOBase.dropdefault was undeclared at import time during import to QuantumESPRESSOFormatter. WARNING: Imported binding QuantumESPRESSOBase.groupname was undeclared at import time during import to QuantumESPRESSOFormatter. WARNING: Imported binding AbInitioSoftwareBase.FormatConfig was undeclared at import time during import to QuantumESPRESSOFormatter. WARNING: Imported binding AbInitioSoftwareBase.Namelist was undeclared at import time during import to QuantumESPRESSOFormatter. ERROR: LoadError: invalid method definition in QuantumESPRESSOFormatter: exported function AbInitioSoftwareBase.FormatConfig does not exist Stacktrace: [1] top-level scope @ ~/.julia/packages/QuantumESPRESSOFormatter/x01CM/src/input.jl:7 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [3] top-level scope @ ~/.julia/packages/QuantumESPRESSOFormatter/x01CM/src/QuantumESPRESSOFormatter.jl:3 [4] include(mod::Module, _path::String) @ Base ./Base.jl:309 [5] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2691 [6] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2466 [7] macro expansion @ ./loading.jl:2394 [inlined] [8] macro expansion @ ./lock.jl:376 [inlined] [9] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2359 [10] require @ ./loading.jl:2335 [inlined] [11] eval_import_path @ ./module.jl:36 [inlined] [12] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [13] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) @ Base ./module.jl:101 [14] top-level scope @ ~/.julia/packages/QuantumESPRESSO/Ap3Dh/src/Inputs.jl:72 [15] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [16] top-level scope @ ~/.julia/packages/QuantumESPRESSO/Ap3Dh/src/QuantumESPRESSO.jl:3 [17] include(mod::Module, _path::String) @ Base ./Base.jl:309 [18] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2691 [19] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2466 [20] macro expansion @ ./loading.jl:2394 [inlined] [21] macro expansion @ ./lock.jl:376 [inlined] [22] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2359 [23] require @ ./loading.jl:2335 [inlined] [24] eval_import_path @ ./module.jl:36 [inlined] [25] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [26] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) @ Base ./module.jl:101 [27] top-level scope @ ~/.julia/packages/QuantumESPRESSOExpress/Wl5Ji/src/EquationOfStateWorkflow/EquationOfStateWorkflow.jl:4 [28] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [29] top-level scope @ ~/.julia/packages/QuantumESPRESSOExpress/Wl5Ji/src/QuantumESPRESSOExpress.jl:15 [30] include(mod::Module, _path::String) @ Base ./Base.jl:309 [31] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2691 [32] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2466 [33] macro expansion @ ./loading.jl:2394 [inlined] [34] macro expansion @ ./lock.jl:376 [inlined] [35] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2359 [36] require @ ./loading.jl:2335 [inlined] [37] eval_import_path @ ./module.jl:36 [inlined] [38] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [39] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [40] top-level scope @ none:1 [41] eval(m::Module, e::Any) @ Core ./boot.jl:489 [42] exec_options(opts::Base.JLOptions) @ Base ./client.jl:290 [43] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/QuantumESPRESSOFormatter/x01CM/src/input.jl:7 in expression starting at /home/pkgeval/.julia/packages/QuantumESPRESSOFormatter/x01CM/src/QuantumESPRESSOFormatter.jl:1 in expression starting at /home/pkgeval/.julia/packages/QuantumESPRESSO/Ap3Dh/src/Inputs.jl:1 in expression starting at /home/pkgeval/.julia/packages/QuantumESPRESSO/Ap3Dh/src/QuantumESPRESSO.jl:1 in expression starting at /home/pkgeval/.julia/packages/QuantumESPRESSOExpress/Wl5Ji/src/EquationOfStateWorkflow/EquationOfStateWorkflow.jl:1 in expression starting at /home/pkgeval/.julia/packages/QuantumESPRESSOExpress/Wl5Ji/src/QuantumESPRESSOExpress.jl:1 Loading failed after 393.57s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using QuantumESPRESSOExpress'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:602 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:517 [3] run(::Cmd) @ Base ./process.jl:514 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:309 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:324 [7] _start() @ Base ./client.jl:557 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 1001.42s: illegal method overwrites during precompilation