Package evaluation of Colocalization on Julia 1.13.0-DEV.791 (d5209bd37d*) started at 2025-07-04T21:15:51.955 ################################################################################ # Set-up # Set-up completed after 0.2s ################################################################################ # Installation # Installing Colocalization... Resolving package versions... Installed MKL_jll ───────────────────── v2025.0.1+1 Installed Libtiff_jll ───────────────── v4.7.1+0 Installed ImageIO ───────────────────── v0.6.8 Installed ImageMagick ───────────────── v1.2.1 Installed MosaicViews ───────────────── v0.3.4 Installed InlineStrings ─────────────── v1.4.4 Installed OrderedCollections ────────── v1.8.1 Installed NearestNeighbors ──────────── v0.4.21 Installed Compiler ──────────────────── v0.1.1 Installed CustomUnitRanges ──────────── v1.0.2 Installed Distances ─────────────────── v0.10.12 Installed SentinelArrays ────────────── v1.4.8 Installed SimpleWeightedGraphs ──────── v1.5.0 Installed QuadGK ────────────────────── v2.11.2 Installed NaNMath ───────────────────── v1.1.3 Installed Graphics ──────────────────── v1.1.3 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed Revise ────────────────────── v3.8.0 Installed FileIO ────────────────────── v1.17.0 Installed LoweredCodeUtils ──────────── v3.4.0 Installed WoodburyMatrices ──────────── v0.5.6 Installed Tables ────────────────────── v1.12.1 Installed Reexport ──────────────────── v1.2.2 Installed LaTeXStrings ──────────────── v1.4.0 Installed LERC_jll ──────────────────── v4.0.1+0 Installed Imath_jll ─────────────────── v3.1.11+0 Installed Missings ──────────────────── v1.2.0 Installed TableTraits ───────────────── v1.0.1 Installed Preferences ───────────────── v1.4.3 Installed RegionTrees ───────────────── v0.3.2 Installed RangeArrays ───────────────── v0.3.2 Installed UnPack ────────────────────── v1.0.2 Installed MappedArrays ──────────────── v0.4.2 Installed Crayons ───────────────────── v4.1.1 Installed SortingAlgorithms ─────────── v1.2.1 Installed Inflate ───────────────────── v0.1.5 Installed MacroTools ────────────────── v0.5.16 Installed DataStructures ────────────── v0.18.22 Installed OpenEXR_jll ───────────────── v3.2.4+0 Installed oneTBB_jll ────────────────── v2022.0.0+0 Installed ArnoldiMethod ─────────────── v0.4.0 Installed CodecZlib ─────────────────── v0.7.8 Installed FillArrays ────────────────── v1.13.0 Installed LazyModules ───────────────── v0.3.1 Installed Quaternions ───────────────── v0.7.6 Installed StatsBase ─────────────────── v0.34.5 Installed DataValueInterfaces ───────── v1.0.0 Installed IntelOpenMP_jll ───────────── v2025.0.4+0 Installed CEnum ─────────────────────── v0.5.0 Installed RealDot ───────────────────── v0.1.0 Installed TextWrap ──────────────────── v1.0.2 Installed IrrationalConstants ───────── v0.2.4 Installed LoggingExtras ─────────────── v1.1.0 Installed Clustering ────────────────── v0.15.8 Installed libpng_jll ────────────────── v1.6.50+0 Installed SimpleTraits ──────────────── v0.9.4 Installed ImageMetadata ─────────────── v0.9.9 Installed ColorVectorSpace ──────────── v0.9.10 Installed ArgParse ──────────────────── v1.2.0 Installed ImageTransformations ──────── v0.9.5 Installed libsixel_jll ──────────────── v1.10.5+0 Installed ImageShow ─────────────────── v0.3.8 Installed MetaGraphs ────────────────── v0.7.2 Installed ImageMorphology ───────────── v0.3.2 Installed PooledArrays ──────────────── v1.4.3 Installed ImageMagick_jll ───────────── v6.9.13025+0 Installed PDMats ────────────────────── v0.11.35 Installed ImageCore ─────────────────── v0.9.4 Installed WorkerUtilities ───────────── v1.6.1 Installed AxisArrays ────────────────── v0.4.7 Installed PNGFiles ──────────────────── v0.4.4 Installed FFTViews ──────────────────── v0.3.2 Installed DocStringExtensions ───────── v0.9.5 Installed JpegTurbo ─────────────────── v0.1.6 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed OpenJpeg_jll ──────────────── v2.5.4+0 Installed StackViews ────────────────── v0.1.2 Installed PkgVersion ────────────────── v0.3.3 Installed Ghostscript_jll ───────────── v9.55.0+4 Installed Interpolations ────────────── v0.14.7 Installed TiledIteration ────────────── v0.3.1 Installed AliasTables ───────────────── v1.1.3 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed SIMD ──────────────────────── v3.7.1 Installed InvertedIndices ───────────── v1.3.1 Installed DataAPI ───────────────────── v1.16.0 Installed ImageDistances ────────────── v0.2.17 Installed Netpbm ────────────────────── v1.1.1 Installed ImageQualityIndexes ───────── v0.3.7 Installed Colors ────────────────────── v0.12.11 Installed StaticArrays ──────────────── v1.9.13 Installed ImageAxes ─────────────────── v0.6.11 Installed StaticArraysCore ──────────── v1.4.3 Installed CodeTracking ──────────────── v1.3.9 Installed AbstractFFTs ──────────────── v1.5.0 Installed QOI ───────────────────────── v1.0.1 Installed AxisAlgorithms ────────────── v1.0.1 Installed ColorTypes ────────────────── v0.11.5 Installed Requires ──────────────────── v1.3.1 Installed StringManipulation ────────── v0.4.1 Installed LogExpFunctions ───────────── v0.3.29 Installed PrettyTables ──────────────── v2.4.0 Installed Parsers ───────────────────── v2.8.3 Installed JuliaInterpreter ──────────── v0.10.3 Installed Rmath ─────────────────────── v0.8.0 Installed Distributions ─────────────── v0.25.120 Installed StatsFuns ─────────────────── v1.5.0 Installed OpenEXR ───────────────────── v0.3.3 Installed Colocalization ────────────── v0.2.1 Installed WeakRefStrings ────────────── v1.4.2 Installed JLLWrappers ───────────────── v1.7.0 Installed DataFrames ────────────────── v1.7.0 Installed XZ_jll ────────────────────── v5.8.1+0 Installed IterTools ─────────────────── v1.10.0 Installed FilePathsBase ─────────────── v0.9.24 Installed TiffImages ────────────────── v0.10.2 Installed ImageContrastAdjustment ───── v0.3.12 Installed JpegTurbo_jll ─────────────── v3.1.1+0 Installed Graphs ────────────────────── v1.13.0 Installed PaddedViews ───────────────── v0.5.12 Installed JLD2 ──────────────────────── v0.4.54 Installed Adapt ─────────────────────── v3.7.2 Installed HypergeometricFunctions ───── v0.3.28 Installed Compat ────────────────────── v4.17.0 Installed TensorCore ────────────────── v0.1.1 Installed Sixel ─────────────────────── v0.1.5 Installed TranscodingStreams ────────── v0.11.3 Installed Statistics ────────────────── v1.11.1 Installed ColorSchemes ──────────────── v3.26.0 Installed ImageSegmentation ─────────── v1.8.1 Installed ImageBase ─────────────────── v0.1.5 Installed StatsAPI ──────────────────── v1.7.1 Installed ProgressMeter ─────────────── v1.10.4 Installed OffsetArrays ──────────────── v1.17.0 Installed PrecompileTools ───────────── v1.3.2 Installed CoordinateTransformations ─── v0.6.4 Installed Ratios ────────────────────── v0.4.5 Installed PtrArrays ─────────────────── v1.3.0 Installed ComputationalResources ────── v0.3.2 Installed Parameters ────────────────── v0.12.3 Installed ChainRulesCore ────────────── v1.25.2 Installed IntegralArrays ────────────── v0.1.6 Installed LittleCMS_jll ─────────────── v2.16.0+0 Installed FixedPointNumbers ─────────── v0.8.5 Installed IntervalSets ──────────────── v0.7.11 Installed Rotations ─────────────────── v1.7.1 Installed SpecialFunctions ──────────── v2.5.1 Installed FFTW ──────────────────────── v1.9.0 Installed FFTW_jll ──────────────────── v3.3.11+0 Installed CatIndices ────────────────── v0.2.2 Installed IndirectArrays ────────────── v1.0.0 Installed Images ────────────────────── v0.25.3 Installed CSV ───────────────────────── v0.10.15 Installed ImageFiltering ────────────── v0.7.6 Installing 16 artifacts Installed artifact Rmath 121.9 KiB Installed artifact libsixel 177.3 KiB Installed artifact oneTBB 435.6 KiB Installed artifact LittleCMS 747.7 KiB Installed artifact OpenJpeg 421.4 KiB Installed artifact Imath 182.8 KiB Installed artifact libpng 328.4 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact FFTW 2.2 MiB Installed artifact OpenEXR 1.9 MiB Installed artifact XZ 1.5 MiB Installed artifact LERC 272.9 KiB Installed artifact Libtiff 3.2 MiB Installed artifact JpegTurbo 1.6 MiB Installed artifact ImageMagick 6.2 MiB Installed artifact Ghostscript 31.4 MiB Updating `~/.julia/environments/v1.13/Project.toml` [5deedb61] + Colocalization v0.2.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 ⌅ [79e6a3ab] + Adapt v3.7.2 [66dad0bd] + AliasTables v1.1.3 [c7e460c6] + ArgParse v1.2.0 [ec485272] + ArnoldiMethod v0.4.0 ⌃ [13072b0f] + AxisAlgorithms v1.0.1 [39de3d68] + AxisArrays v0.4.7 [fa961155] + CEnum v0.5.0 [336ed68f] + CSV v0.10.15 [aafaddc9] + CatIndices v0.2.2 [d360d2e6] + ChainRulesCore v1.25.2 [aaaa29a8] + Clustering v0.15.8 [da1fd8a2] + CodeTracking v1.3.9 [944b1d66] + CodecZlib v0.7.8 [5deedb61] + Colocalization v0.2.1 ⌃ [35d6a980] + ColorSchemes v3.26.0 ⌅ [3da002f7] + ColorTypes v0.11.5 ⌅ [c3611d14] + ColorVectorSpace v0.9.10 ⌅ [5ae59095] + Colors v0.12.11 [34da2185] + Compat v4.17.0 [807dbc54] + Compiler v0.1.1 [ed09eef8] + ComputationalResources v0.3.2 [150eb455] + CoordinateTransformations v0.6.4 [a8cc5b0e] + Crayons v4.1.1 [dc8bdbbb] + CustomUnitRanges v1.0.2 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [4f61f5a4] + FFTViews v0.3.2 [7a1cc6ca] + FFTW v1.9.0 [5789e2e9] + FileIO v1.17.0 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.13.0 [53c48c17] + FixedPointNumbers v0.8.5 [a2bd30eb] + Graphics v1.1.3 [86223c79] + Graphs v1.13.0 [34004b35] + HypergeometricFunctions v0.3.28 ⌃ [2803e5a7] + ImageAxes v0.6.11 ⌃ [c817782e] + ImageBase v0.1.5 [f332f351] + ImageContrastAdjustment v0.3.12 ⌅ [a09fc81d] + ImageCore v0.9.4 [51556ac3] + ImageDistances v0.2.17 ⌃ [6a3955dd] + ImageFiltering v0.7.6 ⌃ [82e4d734] + ImageIO v0.6.8 ⌃ [6218d12a] + ImageMagick v1.2.1 ⌃ [bc367c6b] + ImageMetadata v0.9.9 ⌅ [787d08f9] + ImageMorphology v0.3.2 [2996bd0c] + ImageQualityIndexes v0.3.7 ⌃ [80713f31] + ImageSegmentation v1.8.1 [4e3cecfd] + ImageShow v0.3.8 ⌅ [02fcd773] + ImageTransformations v0.9.5 ⌅ [916415d5] + Images v0.25.3 [9b13fd28] + IndirectArrays v1.0.0 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.4 [1d092043] + IntegralArrays v0.1.6 ⌅ [a98d9a8b] + Interpolations v0.14.7 [8197267c] + IntervalSets v0.7.11 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] + JLD2 v0.4.54 [692b3bcd] + JLLWrappers v1.7.0 [b835a17e] + JpegTurbo v0.1.6 [aa1ae85d] + JuliaInterpreter v0.10.3 [b964fa9f] + LaTeXStrings v1.4.0 [8cdb02fc] + LazyModules v0.3.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 [6f1432cf] + LoweredCodeUtils v3.4.0 [1914dd2f] + MacroTools v0.5.16 [dbb5928d] + MappedArrays v0.4.2 ⌅ [626554b9] + MetaGraphs v0.7.2 [e1d29d7a] + Missings v1.2.0 [e94cdb99] + MosaicViews v0.3.4 [77ba4419] + NaNMath v1.1.3 [b8a86587] + NearestNeighbors v0.4.21 [f09324ee] + Netpbm v1.1.1 [6fe1bfb0] + OffsetArrays v1.17.0 [52e1d378] + OpenEXR v0.3.3 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [f57f5aa1] + PNGFiles v0.4.4 [5432bcbf] + PaddedViews v0.5.12 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [eebad327] + PkgVersion v0.3.3 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [4b34888f] + QOI v1.0.1 [1fd47b50] + QuadGK v2.11.2 [94ee1d12] + Quaternions v0.7.6 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [c1ae055f] + RealDot v0.1.0 [189a3867] + Reexport v1.2.2 [dee08c22] + RegionTrees v0.3.2 [ae029012] + Requires v1.3.1 [295af30f] + Revise v3.8.0 [79098fc4] + Rmath v0.8.0 [6038ab10] + Rotations v1.7.1 [fdea26ae] + SIMD v3.7.1 [91c51154] + SentinelArrays v1.4.8 [699a6c99] + SimpleTraits v0.9.4 [47aef6b3] + SimpleWeightedGraphs v1.5.0 [45858cf5] + Sixel v0.1.5 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.1 [cae243ae] + StackViews v0.1.2 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.5 [4c63d2b9] + StatsFuns v1.5.0 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [b718987f] + TextWrap v1.0.2 ⌅ [731e570b] + TiffImages v0.10.2 ⌅ [06e1c1a7] + TiledIteration v0.3.1 [3bb67fe8] + TranscodingStreams v0.11.3 [3a884ed6] + UnPack v1.0.2 [ea10d353] + WeakRefStrings v1.4.2 ⌅ [efce3f68] + WoodburyMatrices v0.5.6 [76eceee3] + WorkerUtilities v1.6.1 [f5851436] + FFTW_jll v3.3.11+0 [61579ee1] + Ghostscript_jll v9.55.0+4 ⌅ [c73af94c] + ImageMagick_jll v6.9.13025+0 [905a6f67] + Imath_jll v3.1.11+0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [aacddb02] + JpegTurbo_jll v3.1.1+0 [88015f11] + LERC_jll v4.0.1+0 [89763e89] + Libtiff_jll v4.7.1+0 [d3a379c0] + LittleCMS_jll v2.16.0+0 [856f044c] + MKL_jll v2025.0.1+1 [18a262bb] + OpenEXR_jll v3.2.4+0 [643b3616] + OpenJpeg_jll v2.5.4+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [ffd25f8a] + XZ_jll v5.8.1+0 [b53b4c65] + libpng_jll v1.6.50+0 [075b6546] + libsixel_jll v1.10.5+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.14.1+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.0+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 19.18s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 1687.4 ms ✓ MappedArrays 1252.4 ms ✓ DocStringExtensions 767.5 ms ✓ DataValueInterfaces 2588.2 ms ✓ IrrationalConstants 971.0 ms ✓ TensorCore 1142.1 ms ✓ LaTeXStrings 1025.5 ms ✓ UnPack 901.4 ms ✓ WorkerUtilities 722.4 ms ✓ CustomUnitRanges 1129.9 ms ✓ Requires 1145.2 ms ✓ Statistics 938.0 ms ✓ LazyModules 852.7 ms ✓ RangeArrays 841.5 ms ✓ DataAPI 1717.7 ms ✓ InlineStrings 833.5 ms ✓ IndirectArrays 876.5 ms ✓ InvertedIndices 811.6 ms ✓ StatsAPI 1666.4 ms ✓ Compiler 865.5 ms ✓ TextWrap 4347.8 ms ✓ MacroTools 1298.8 ms ✓ OrderedCollections 739.4 ms ✓ IteratorInterfaceExtensions 1818.7 ms ✓ Crayons 840.1 ms ✓ CEnum 1698.1 ms ✓ OffsetArrays 1909.7 ms ✓ FillArrays 768.4 ms ✓ RealDot 1244.0 ms ✓ TranscodingStreams 770.3 ms ✓ PtrArrays 1071.6 ms ✓ IntervalSets 1030.7 ms ✓ Inflate 1007.0 ms ✓ ComputationalResources 904.1 ms ✓ StaticArraysCore 761.6 ms ✓ Reexport 1213.3 ms ✓ IterTools 1065.6 ms ✓ AbstractFFTs 1202.2 ms ✓ SuiteSparse 982.3 ms ✓ NaNMath 1334.9 ms ✓ WoodburyMatrices 1765.7 ms ✓ ProgressMeter 3839.1 ms ✓ SentinelArrays 1156.7 ms ✓ LoggingExtras 3851.5 ms ✓ CodeTracking 1232.1 ms ✓ Preferences 1098.2 ms ✓ Compat 4684.6 ms ✓ PkgVersion 1446.7 ms ✓ LogExpFunctions 858.3 ms ✓ Ratios 955.1 ms ✓ Adapt 9837.9 ms ✓ FileIO 1272.1 ms ✓ Statistics → SparseArraysExt 3640.7 ms ✓ FixedPointNumbers 962.7 ms ✓ Missings 1031.6 ms ✓ PooledArrays 1451.3 ms ✓ Distances 1783.9 ms ✓ ArgParse 3608.0 ms ✓ SimpleTraits 961.4 ms ✓ Parameters 744.2 ms ✓ TableTraits 991.7 ms ✓ TiledIteration 945.9 ms ✓ PaddedViews 873.7 ms ✓ StackViews 898.0 ms ✓ CatIndices 949.6 ms ✓ FillArrays → FillArraysStatisticsExt 1458.8 ms ✓ FillArrays → FillArraysSparseArraysExt 1082.3 ms ✓ Quaternions 991.7 ms ✓ CodecZlib 994.2 ms ✓ AliasTables 856.3 ms ✓ IntervalSets → IntervalSetsRandomExt 851.2 ms ✓ IntervalSets → IntervalSetsStatisticsExt 3879.1 ms ✓ AbstractFFTs → AbstractFFTsTestExt 1749.8 ms ✓ PDMats 1338.3 ms ✓ AxisAlgorithms 10848.0 ms ✓ JuliaInterpreter 987.5 ms ✓ PrecompileTools 1214.8 ms ✓ JLLWrappers 877.4 ms ✓ Compat → CompatLinearAlgebraExt 885.3 ms ✓ OffsetArrays → OffsetArraysAdaptExt 4582.6 ms ✓ ColorTypes 911.9 ms ✓ Ratios → RatiosFixedPointNumbersExt 1334.4 ms ✓ Distances → DistancesSparseArraysExt 1794.8 ms ✓ Tables 1060.8 ms ✓ MosaicViews 1872.4 ms ✓ AxisArrays 1355.4 ms ✓ FillArrays → FillArraysPDMatsExt 19466.5 ms ✓ LoweredCodeUtils 3119.1 ms ✓ StringManipulation 17301.1 ms ✓ SIMD 12809.0 ms ✓ StaticArrays 16859.1 ms ✓ Parsers ✗ JLD2 1458.4 ms ✓ XZ_jll 1399.3 ms ✓ libpng_jll 1414.9 ms ✓ OpenSpecFun_jll 1452.6 ms ✓ Ghostscript_jll 1453.9 ms ✓ Rmath_jll 5187.9 ms ✓ IntelOpenMP_jll 1420.0 ms ✓ JpegTurbo_jll 1400.0 ms ✓ oneTBB_jll 1364.4 ms ✓ LERC_jll 1424.4 ms ✓ FFTW_jll 1430.9 ms ✓ Imath_jll 2703.1 ms ✓ ChainRulesCore 2501.3 ms ✓ FilePathsBase 4335.8 ms ✓ DataStructures 6862.2 ms ✓ Colors 1123.3 ms ✓ IntegralArrays 5579.5 ms ✓ QOI 10904.7 ms ✓ Revise 27858.2 ms ✓ PrettyTables 3946.6 ms ✓ ArnoldiMethod 3194.6 ms ✓ CoordinateTransformations 1542.1 ms ✓ StaticArrays → StaticArraysStatisticsExt 1686.5 ms ✓ RegionTrees 1497.6 ms ✓ Adapt → AdaptStaticArraysExt 5028.4 ms ✓ Rotations 1108.6 ms ✓ InlineStrings → ParsersExt 5303.5 ms ✓ SpecialFunctions 1625.6 ms ✓ Rmath 1452.3 ms ✓ libsixel_jll 7860.3 ms ✓ MKL_jll 1373.6 ms ✓ Libtiff_jll 1384.8 ms ✓ OpenEXR_jll 1298.0 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 939.8 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 3130.6 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 922.4 ms ✓ Distances → DistancesChainRulesCoreExt 1582.1 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1482.1 ms ✓ FilePathsBase → FilePathsBaseMmapExt 3360.3 ms ✓ FilePathsBase → FilePathsBaseTestExt 3212.6 ms ✓ QuadGK 1877.1 ms ✓ SortingAlgorithms 100543.3 ms ✓ TiffImages 1332.1 ms ✓ Graphics 3787.4 ms ✓ Revise → DistributedExt 3956.6 ms ✓ NearestNeighbors 9984.6 ms ✓ Graphs 2519.9 ms ✓ WeakRefStrings 4096.8 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2468.2 ms ✓ HypergeometricFunctions 4216.4 ms ✓ ColorVectorSpace 7045.3 ms ✓ FFTW 1501.6 ms ✓ LittleCMS_jll 5857.5 ms ✓ OpenEXR 4715.8 ms ✓ Interpolations 5263.6 ms ✓ StatsBase 83539.3 ms ✓ DataFrames 3969.5 ms ✓ SimpleWeightedGraphs ✗ MetaGraphs 27571.9 ms ✓ CSV 2935.3 ms ✓ StatsFuns 49927.5 ms ✓ ImageCore 6583.7 ms ✓ ColorSchemes 1252.6 ms ✓ FFTViews 1592.8 ms ✓ OpenJpeg_jll 4900.4 ms ✓ Clustering 4052.4 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 9570.5 ms ✓ Distributions 5323.5 ms ✓ ImageMorphology 5300.0 ms ✓ ImageBase 7966.6 ms ✓ PNGFiles 11164.9 ms ✓ Sixel 11586.5 ms ✓ JpegTurbo 1518.8 ms ✓ ImageMagick_jll 3852.4 ms ✓ Distributions → DistributionsTestExt 4040.7 ms ✓ Distributions → DistributionsChainRulesCoreExt 5062.4 ms ✓ ImageDistances 7282.0 ms ✓ ImageAxes 7865.4 ms ✓ ImageTransformations 9000.1 ms ✓ ImageShow 92194.8 ms ✓ ImageFiltering 13546.1 ms ✓ ImageMagick 5777.1 ms ✓ ImageMetadata 8818.0 ms ✓ ImageContrastAdjustment ✗ ImageSegmentation 10070.1 ms ✓ Netpbm 24550.2 ms ✓ ImageQualityIndexes 5189.3 ms ✓ ImageIO ✗ Images ✗ Colocalization 176 dependencies successfully precompiled in 1321 seconds. 40 already precompiled. 2 dependencies had output during precompilation: ┌ ImageFiltering │ WARNING: Constructor for type "Alg" was extended in `ImageFiltering` without explicit qualification or import. │ NOTE: Assumed "Alg" refers to `Algorithm.Alg`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Alg end`. │ Hint: To silence the warning, qualify `Alg` as `Algorithm.Alg` in the method signature or explicitly `import Algorithm: Alg`. └ ┌ MKL_jll │ Downloading artifact: IntelOpenMP └ ERROR: LoadError: The following 1 direct dependency failed to precompile: Colocalization Failed to precompile Colocalization [5deedb61-f8ac-43ca-82f0-d70c51e04289] to "/home/pkgeval/.julia/compiled/v1.13/Colocalization/jl_ou7YXN" (ProcessExited(1)). Error encountered while load FileIO.File{FileIO.DataFormat{:JLD2}, String}("/tmp/jl_EkXoCz"). Fatal error: ERROR: LoadError: ConcurrencyViolationError("deadlock detected in loading JLD2 using JLD2") Stacktrace: [1] canstart_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2183 [2] start_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2191 [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing) @ Base ./loading.jl:2461 [4] _require_prelocked @ ./loading.jl:2460 [inlined] [5] macro expansion @ ./lock.jl:376 [inlined] [6] __require(uuidkey::Base.PkgId) @ Base ./loading.jl:2458 [7] require @ ./loading.jl:2456 [inlined] [8] #37 @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [inlined] [9] lock(f::FileIO.var"#37#38"{Base.PkgId}, l::ReentrantLock) @ Base ./lock.jl:335 [10] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [11] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [12] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [13] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [14] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [15] #111 @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [inlined] [16] mktemp(fn::JLD2.var"#111#112"{Symbol, Vector{Float64}, NTuple{5, Int64}, String, Dict{String, Int64}, Matrix{ComplexF64}, Vector{Float64}, Float64, Int64}, parent::String) @ Base.Filesystem ./file.jl:870 [17] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [18] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [19] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [20] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [21] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [22] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:118 Stacktrace: [1] handle_error(e::ConcurrencyViolationError, q::Base.PkgId, bt::Vector{Union{Ptr{Nothing}, Base.InterpreterIP}}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:71 [2] handle_exceptions(exceptions::Vector{Tuple{Any, Union{Base.PkgId, Module}, Vector}}, action::String) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:66 [3] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:228 [4] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [5] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [6] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [7] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [8] #111 @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [inlined] [9] mktemp(fn::JLD2.var"#111#112"{Symbol, Vector{Float64}, NTuple{5, Int64}, String, Dict{String, Int64}, Matrix{ComplexF64}, Vector{Float64}, Float64, Int64}, parent::String) @ Base.Filesystem ./file.jl:870 [10] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [11] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [12] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [13] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [14] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [15] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:118 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [17] IncludeInto @ ./Base.jl:311 [inlined] [18] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/JLD2.jl:518 [19] include(mod::Module, _path::String) @ Base ./Base.jl:309 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3000 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [24] include_string @ ./loading.jl:2856 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [26] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/precompile.jl:3 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/JLD2.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile JLD2 [033835bb-8acc-5ee8-8aae-3f567f8a3819] to "/home/pkgeval/.julia/compiled/v1.13/JLD2/jl_0RCPOK" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3287 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2652 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#232 @ ./reflection.jl:1282 [inlined] [8] invokelatest_gr @ ./reflection.jl:1274 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3858 [10] maybe_cachefile_lock @ ./loading.jl:3855 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2638 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2466 [13] macro expansion @ ./loading.jl:2394 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2359 [16] require @ ./loading.jl:2335 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:3 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3000 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [26] include_string @ ./loading.jl:2856 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [28] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile MetaGraphs [626554b9-1ddb-594c-aa3c-2596fe9399a5] to "/home/pkgeval/.julia/compiled/v1.13/MetaGraphs/jl_XBqXni" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3287 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2652 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#232 @ ./reflection.jl:1282 [inlined] [8] invokelatest_gr @ ./reflection.jl:1274 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3858 [10] maybe_cachefile_lock @ ./loading.jl:3855 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2638 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2466 [13] macro expansion @ ./loading.jl:2394 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2359 [16] require @ ./loading.jl:2335 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) @ Base ./module.jl:101 [20] top-level scope @ ~/.julia/packages/ImageSegmentation/pYW1e/src/ImageSegmentation.jl:11 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3000 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [26] include_string @ ./loading.jl:2856 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [28] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/ImageSegmentation/pYW1e/src/ImageSegmentation.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ImageSegmentation [80713f31-8817-5129-9cf8-209ff8fb23e1] to "/home/pkgeval/.julia/compiled/v1.13/ImageSegmentation/jl_rS20Cq" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3287 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2652 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#232 @ ./reflection.jl:1282 [inlined] [8] invokelatest_gr @ ./reflection.jl:1274 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3858 [10] maybe_cachefile_lock @ ./loading.jl:3855 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2638 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2466 [13] macro expansion @ ./loading.jl:2394 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2359 [16] require @ ./loading.jl:2335 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/Images/Kttvj/src/Images.jl:29 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3000 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [26] include_string @ ./loading.jl:2856 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [28] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/Images/Kttvj/src/Images.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Images [916415d5-f1e6-5110-898d-aaa5f9f070e0] to "/home/pkgeval/.julia/compiled/v1.13/Images/jl_bDRLdz" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3287 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2652 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#232 @ ./reflection.jl:1282 [inlined] [8] invokelatest_gr @ ./reflection.jl:1274 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3858 [10] maybe_cachefile_lock @ ./loading.jl:3855 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2638 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2466 [13] macro expansion @ ./loading.jl:2394 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2359 [16] require @ ./loading.jl:2335 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/Colocalization/MoKsi/src/Colocalization.jl:22 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3000 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [26] include_string @ ./loading.jl:2856 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [28] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/Colocalization/MoKsi/src/Colocalization.jl:17 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 1327.46s ################################################################################ # Loading # Loading Colocalization... Precompiling packages... ✗ JLD2 ✗ MetaGraphs ✗ ImageSegmentation ✗ Images Info Given Colocalization was explicitly requested, output will be shown live  Error encountered while load FileIO.File{FileIO.DataFormat{:JLD2}, String}("/tmp/jl_JsKmx2").  Fatal error: ERROR: LoadError: ConcurrencyViolationError("deadlock detected in loading JLD2 using JLD2") Stacktrace:  [1] canstart_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool)  @ Base ./loading.jl:2183  [2] start_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool)  @ Base ./loading.jl:2191  [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing)  @ Base ./loading.jl:2461  [4] _require_prelocked  @ ./loading.jl:2460 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(uuidkey::Base.PkgId)  @ Base ./loading.jl:2458  [7] require  @ ./loading.jl:2456 [inlined]  [8] #37  @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [inlined]  [9] lock(f::FileIO.var"#37#38"{Base.PkgId}, l::ReentrantLock)  @ Base ./lock.jl:335  [10] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{})  @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203  [11] action  @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined]  [12] action  @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined]  [13] load(::String; options::@Kwargs{})  @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113  [14] load  @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined]  [15] #111  @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [inlined]  [16] mktemp(fn::JLD2.var"#111#112"{Symbol, Vector{Float64}, NTuple{5, Int64}, String, Dict{String, Int64}, Matrix{ComplexF64}, Vector{Float64}, Float64, Int64}, parent::String)  @ Base.Filesystem ./file.jl:870  [17] mktemp(fn::Function)  @ Base.Filesystem ./file.jl:868  [18] macro expansion  @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined]  [19] macro expansion  @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]  [20] macro expansion  @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined]  [21] macro expansion  @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined]  [22] top-level scope  @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:118 Stacktrace:  [1] handle_error(e::ConcurrencyViolationError, q::Base.PkgId, bt::Vector{Union{Ptr{Nothing}, Base.InterpreterIP}})  @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:71  [2] handle_exceptions(exceptions::Vector{Tuple{Any, Union{Base.PkgId, Module}, Vector}}, action::String)  @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:66  [3] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{})  @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:228  [4] action  @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined]  [5] action  @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined]  [6] load(::String; options::@Kwargs{})  @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113  [7] load  @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined]  [8] #111  @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [inlined]  [9] mktemp(fn::JLD2.var"#111#112"{Symbol, Vector{Float64}, NTuple{5, Int64}, String, Dict{String, Int64}, Matrix{ComplexF64}, Vector{Float64}, Float64, Int64}, parent::String)  @ Base.Filesystem ./file.jl:870  [10] mktemp(fn::Function)  @ Base.Filesystem ./file.jl:868  [11] macro expansion  @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined]  [12] macro expansion  @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]  [13] macro expansion  @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined]  [14] macro expansion  @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined]  [15] top-level scope  @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:118  [16] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [17] IncludeInto  @ ./Base.jl:311 [inlined]  [18] top-level scope  @ ~/.julia/packages/JLD2/wLPAN/src/JLD2.jl:518  [19] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:3000  [21] top-level scope  @ stdin:5  [22] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2846  [24] include_string  @ ./loading.jl:2856 [inlined]  [25] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:322  [26] _start()  @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/precompile.jl:3 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/JLD2.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile JLD2 [033835bb-8acc-5ee8-8aae-3f567f8a3819] to "/home/pkgeval/.julia/compiled/v1.13/JLD2/jl_JfAfiB" (ProcessExited(1)). Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3287  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()  @ Base ./loading.jl:2652  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94  [5] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115  [7] #invokelatest_gr#232  @ ./reflection.jl:1282 [inlined]  [8] invokelatest_gr  @ ./reflection.jl:1274 [inlined]  [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3858  [10] maybe_cachefile_lock  @ ./loading.jl:3855 [inlined]  [11] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2638  [12] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2466  [13] macro expansion  @ ./loading.jl:2394 [inlined]  [14] macro expansion  @ ./lock.jl:376 [inlined]  [15] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2359  [16] require  @ ./loading.jl:2335 [inlined]  [17] eval_import_path  @ ./module.jl:36 [inlined]  [18] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [19] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [20] top-level scope  @ ~/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:3  [21] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:3000  [23] top-level scope  @ stdin:5  [24] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2846  [26] include_string  @ ./loading.jl:2856 [inlined]  [27] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:322  [28] _start()  @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile MetaGraphs [626554b9-1ddb-594c-aa3c-2596fe9399a5] to "/home/pkgeval/.julia/compiled/v1.13/MetaGraphs/jl_0iC02a" (ProcessExited(1)). Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3287  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()  @ Base ./loading.jl:2652  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94  [5] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115  [7] #invokelatest_gr#232  @ ./reflection.jl:1282 [inlined]  [8] invokelatest_gr  @ ./reflection.jl:1274 [inlined]  [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3858  [10] maybe_cachefile_lock  @ ./loading.jl:3855 [inlined]  [11] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2638  [12] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2466  [13] macro expansion  @ ./loading.jl:2394 [inlined]  [14] macro expansion  @ ./lock.jl:376 [inlined]  [15] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2359  [16] require  @ ./loading.jl:2335 [inlined]  [17] eval_import_path  @ ./module.jl:36 [inlined]  [18] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [19] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})  @ Base ./module.jl:101  [20] top-level scope  @ ~/.julia/packages/ImageSegmentation/pYW1e/src/ImageSegmentation.jl:11  [21] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:3000  [23] top-level scope  @ stdin:5  [24] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2846  [26] include_string  @ ./loading.jl:2856 [inlined]  [27] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:322  [28] _start()  @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/ImageSegmentation/pYW1e/src/ImageSegmentation.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ImageSegmentation [80713f31-8817-5129-9cf8-209ff8fb23e1] to "/home/pkgeval/.julia/compiled/v1.13/ImageSegmentation/jl_07QPtC" (ProcessExited(1)). Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3287  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()  @ Base ./loading.jl:2652  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94  [5] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115  [7] #invokelatest_gr#232  @ ./reflection.jl:1282 [inlined]  [8] invokelatest_gr  @ ./reflection.jl:1274 [inlined]  [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3858  [10] maybe_cachefile_lock  @ ./loading.jl:3855 [inlined]  [11] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2638  [12] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2466  [13] macro expansion  @ ./loading.jl:2394 [inlined]  [14] macro expansion  @ ./lock.jl:376 [inlined]  [15] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2359  [16] require  @ ./loading.jl:2335 [inlined]  [17] eval_import_path  @ ./module.jl:36 [inlined]  [18] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [19] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [20] top-level scope  @ ~/.julia/packages/Images/Kttvj/src/Images.jl:29  [21] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:3000  [23] top-level scope  @ stdin:5  [24] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2846  [26] include_string  @ ./loading.jl:2856 [inlined]  [27] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:322  [28] _start()  @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/Images/Kttvj/src/Images.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Images [916415d5-f1e6-5110-898d-aaa5f9f070e0] to "/home/pkgeval/.julia/compiled/v1.13/Images/jl_oKXXpD" (ProcessExited(1)). Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3287  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()  @ Base ./loading.jl:2652  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94  [5] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115  [7] #invokelatest_gr#232  @ ./reflection.jl:1282 [inlined]  [8] invokelatest_gr  @ ./reflection.jl:1274 [inlined]  [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3858  [10] maybe_cachefile_lock  @ ./loading.jl:3855 [inlined]  [11] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2638  [12] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2466  [13] macro expansion  @ ./loading.jl:2394 [inlined]  [14] macro expansion  @ ./lock.jl:376 [inlined]  [15] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2359  [16] require  @ ./loading.jl:2335 [inlined]  [17] eval_import_path  @ ./module.jl:36 [inlined]  [18] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [19] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [20] top-level scope  @ ~/.julia/packages/Colocalization/MoKsi/src/Colocalization.jl:22  [21] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3000  [23] top-level scope  @ stdin:5  [24] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2846  [26] include_string  @ ./loading.jl:2856 [inlined]  [27] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:322  [28] _start()  @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/Colocalization/MoKsi/src/Colocalization.jl:17 in expression starting at stdin:5 ✗ Colocalization 0 dependencies successfully precompiled in 386 seconds. 216 already precompiled. ERROR: The following 1 direct dependency failed to precompile: Colocalization Failed to precompile Colocalization [5deedb61-f8ac-43ca-82f0-d70c51e04289] to "/home/pkgeval/.julia/compiled/v1.13/Colocalization/jl_xFXOoE" (ProcessExited(1)). Error encountered while load FileIO.File{FileIO.DataFormat{:JLD2}, String}("/tmp/jl_JsKmx2"). Fatal error: ERROR: LoadError: ConcurrencyViolationError("deadlock detected in loading JLD2 using JLD2") Stacktrace: [1] canstart_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2183 [2] start_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2191 [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing) @ Base ./loading.jl:2461 [4] _require_prelocked @ ./loading.jl:2460 [inlined] [5] macro expansion @ ./lock.jl:376 [inlined] [6] __require(uuidkey::Base.PkgId) @ Base ./loading.jl:2458 [7] require @ ./loading.jl:2456 [inlined] [8] #37 @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [inlined] [9] lock(f::FileIO.var"#37#38"{Base.PkgId}, l::ReentrantLock) @ Base ./lock.jl:335 [10] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [11] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [12] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [13] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [14] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [15] #111 @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [inlined] [16] mktemp(fn::JLD2.var"#111#112"{Symbol, Vector{Float64}, NTuple{5, Int64}, String, Dict{String, Int64}, Matrix{ComplexF64}, Vector{Float64}, Float64, Int64}, parent::String) @ Base.Filesystem ./file.jl:870 [17] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [18] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [19] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [20] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [21] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [22] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:118 Stacktrace: [1] handle_error(e::ConcurrencyViolationError, q::Base.PkgId, bt::Vector{Union{Ptr{Nothing}, Base.InterpreterIP}}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:71 [2] handle_exceptions(exceptions::Vector{Tuple{Any, Union{Base.PkgId, Module}, Vector}}, action::String) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:66 [3] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:228 [4] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [5] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [6] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [7] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [8] #111 @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [inlined] [9] mktemp(fn::JLD2.var"#111#112"{Symbol, Vector{Float64}, NTuple{5, Int64}, String, Dict{String, Int64}, Matrix{ComplexF64}, Vector{Float64}, Float64, Int64}, parent::String) @ Base.Filesystem ./file.jl:870 [10] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [11] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [12] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [13] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [14] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [15] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:118 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [17] IncludeInto @ ./Base.jl:311 [inlined] [18] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/JLD2.jl:518 [19] include(mod::Module, _path::String) @ Base ./Base.jl:309 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3000 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [24] include_string @ ./loading.jl:2856 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [26] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/precompile.jl:3 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/JLD2.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile JLD2 [033835bb-8acc-5ee8-8aae-3f567f8a3819] to "/home/pkgeval/.julia/compiled/v1.13/JLD2/jl_JfAfiB" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3287 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2652 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#232 @ ./reflection.jl:1282 [inlined] [8] invokelatest_gr @ ./reflection.jl:1274 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3858 [10] maybe_cachefile_lock @ ./loading.jl:3855 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2638 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2466 [13] macro expansion @ ./loading.jl:2394 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2359 [16] require @ ./loading.jl:2335 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:3 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3000 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [26] include_string @ ./loading.jl:2856 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [28] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile MetaGraphs [626554b9-1ddb-594c-aa3c-2596fe9399a5] to "/home/pkgeval/.julia/compiled/v1.13/MetaGraphs/jl_0iC02a" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3287 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2652 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#232 @ ./reflection.jl:1282 [inlined] [8] invokelatest_gr @ ./reflection.jl:1274 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3858 [10] maybe_cachefile_lock @ ./loading.jl:3855 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2638 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2466 [13] macro expansion @ ./loading.jl:2394 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2359 [16] require @ ./loading.jl:2335 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) @ Base ./module.jl:101 [20] top-level scope @ ~/.julia/packages/ImageSegmentation/pYW1e/src/ImageSegmentation.jl:11 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3000 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [26] include_string @ ./loading.jl:2856 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [28] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/ImageSegmentation/pYW1e/src/ImageSegmentation.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ImageSegmentation [80713f31-8817-5129-9cf8-209ff8fb23e1] to "/home/pkgeval/.julia/compiled/v1.13/ImageSegmentation/jl_07QPtC" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3287 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2652 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#232 @ ./reflection.jl:1282 [inlined] [8] invokelatest_gr @ ./reflection.jl:1274 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3858 [10] maybe_cachefile_lock @ ./loading.jl:3855 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2638 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2466 [13] macro expansion @ ./loading.jl:2394 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2359 [16] require @ ./loading.jl:2335 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/Images/Kttvj/src/Images.jl:29 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3000 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [26] include_string @ ./loading.jl:2856 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [28] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/Images/Kttvj/src/Images.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Images [916415d5-f1e6-5110-898d-aaa5f9f070e0] to "/home/pkgeval/.julia/compiled/v1.13/Images/jl_oKXXpD" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3287 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2652 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#232 @ ./reflection.jl:1282 [inlined] [8] invokelatest_gr @ ./reflection.jl:1274 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3858 [10] maybe_cachefile_lock @ ./loading.jl:3855 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2638 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2466 [13] macro expansion @ ./loading.jl:2394 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2359 [16] require @ ./loading.jl:2335 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/Colocalization/MoKsi/src/Colocalization.jl:22 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3000 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [26] include_string @ ./loading.jl:2856 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [28] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/Colocalization/MoKsi/src/Colocalization.jl:17 in expression starting at stdin: Loading failed after 388.34s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using Colocalization'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:602 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:517 [3] run(::Cmd) @ Base ./process.jl:514 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:309 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:324 [7] _start() @ Base ./client.jl:557 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 1760.33s: package fails to precompile