Package evaluation to test OceanBioME on Julia 1.14.0-DEV.2009 (d4d184e100*) started at 2026-04-10T08:10:02.766 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 12.88s ################################################################################ # Installation # Installing OceanBioME... Resolving package versions... Installed Glob ──────────────────────── v1.4.0 Installed ChunkCodecLibZstd ─────────── v1.0.0 Installed MacroTools ────────────────── v0.5.16 Installed LLVMExtra_jll ─────────────── v0.0.38+0 Installed NVTX ──────────────────────── v1.0.3 Installed Quaternions ───────────────── v0.7.7 Installed PkgVersion ────────────────── v0.3.3 Installed JLD2 ──────────────────────── v0.6.4 Installed MPI ───────────────────────── v0.20.24 Installed LibTracyClient_jll ────────── v0.13.1+0 Installed Adapt ─────────────────────── v4.5.0 Installed MKL_jll ───────────────────── v2025.2.0+0 Installed ConstructionBase ──────────── v1.6.0 Installed GPUCompiler ───────────────── v1.9.1 Installed MPICH_jll ─────────────────── v5.0.0+0 Installed oneTBB_jll ────────────────── v2022.0.0+1 Installed demumble_jll ──────────────── v1.3.0+0 Installed ReactantCore ──────────────── v0.1.19 Installed CUDA_Compiler_jll ─────────── v0.4.2+0 Installed SeawaterPolynomials ───────── v0.3.10 Installed Random123 ─────────────────── v1.7.1 Installed ExprTools ─────────────────── v0.1.10 Installed MicrosoftMPI_jll ──────────── v10.1.4+3 (no artifacts on this platform) Installed ExpressionExplorer ────────── v1.1.4 Installed HashArrayMappedTries ──────── v0.2.0 Installed OrderedCollections ────────── v1.8.1 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed NVTX_jll ──────────────────── v3.2.2+0 Installed DataAPI ───────────────────── v1.16.0 Installed MPIABI_jll ────────────────── v0.1.3+0 Installed Statistics ────────────────── v1.11.1 Installed Krylov ────────────────────── v0.10.6 Installed Xorg_libpciaccess_jll ─────── v0.18.1+0 Installed PrecompileTools ───────────── v1.3.3 Installed StatsAPI ──────────────────── v1.8.0 Installed Atomix ────────────────────── v1.1.3 Installed RandomNumbers ─────────────── v1.6.0 Installed GPUArrays ─────────────────── v11.4.1 Installed StructArrays ──────────────── v0.7.3 Installed DataValueInterfaces ───────── v1.0.0 Installed IntelOpenMP_jll ───────────── v2025.2.0+0 Installed CEnum ─────────────────────── v0.5.0 Installed CUDA ──────────────────────── v5.11.0 Installed OffsetArrays ──────────────── v1.17.0 Installed StaticArraysCore ──────────── v1.4.4 Installed JuliaNVTXCallbacks_jll ────── v0.2.1+0 Installed CubedSphere ───────────────── v0.3.4 Installed FileIO ────────────────────── v1.18.0 Installed StaticArrays ──────────────── v1.9.18 Installed RealDot ───────────────────── v0.1.0 Installed CUDA_Runtime_Discovery ────── v1.0.0 Installed Distances ─────────────────── v0.10.12 Installed GPUArraysCore ─────────────── v0.2.0 Installed CUDA_Runtime_jll ──────────── v0.21.0+0 Installed AbstractFFTs ──────────────── v1.5.0 Installed StringManipulation ────────── v0.4.4 Installed Tracy ─────────────────────── v0.1.6 Installed Requires ──────────────────── v1.3.1 Installed LLVM ──────────────────────── v9.4.6 Installed OpenMPI_jll ───────────────── v5.0.10+0 Installed ChunkCodecLibZlib ─────────── v1.0.0 Installed Hwloc_jll ─────────────────── v2.13.0+1 Installed GibbsSeaWater ─────────────── v0.1.4 Installed KernelAbstractions ────────── v0.9.41 Installed ScopedValues ──────────────── v1.6.0 Installed UnsafeAtomics ─────────────── v0.3.1 Installed CUDA_Driver_jll ───────────── v13.2.0+0 Installed Oceananigans ──────────────── v0.106.4 Installed PrettyTables ──────────────── v3.3.2 Installed MuladdMacro ───────────────── v0.2.4 Installed Tables ────────────────────── v1.12.1 Installed XML2_jll ──────────────────── v2.13.9+0 Installed Reexport ──────────────────── v1.2.2 Installed Scratch ───────────────────── v1.3.0 Installed GPUToolbox ────────────────── v1.1.1 Installed Preferences ───────────────── v1.5.2 Installed JLLWrappers ───────────────── v1.7.1 Installed TableTraits ───────────────── v1.0.1 Installed MPIPreferences ────────────── v0.1.12 Installed FFTW_jll ──────────────────── v3.3.11+0 Installed Rotations ─────────────────── v1.7.1 Installed FFTW ──────────────────────── v1.10.0 Installed TaylorSeries ──────────────── v0.20.10 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed LaTeXStrings ──────────────── v1.4.0 Installed OceanBioME ────────────────── v0.16.11 Installed BFloat16s ─────────────────── v0.6.1 Installed Crayons ───────────────────── v4.1.1 Installed ChunkCodecCore ────────────── v1.0.1 Installed GibbsSeaWater_jll ─────────── v3.5.2+0 Installed LLVMLoopInfo ──────────────── v1.0.0 Installed DocStringExtensions ───────── v0.9.5 Installed MPItrampoline_jll ─────────── v5.5.5+0 Installing 13 artifacts Installed artifact Xorg_libpciaccess 24.8 KiB Installed artifact NVTX 13.7 KiB Installed artifact demumble 322.0 KiB Installed artifact JuliaNVTXCallbacks 8.6 KiB Installed artifact LibTracyClient 502.2 KiB Installed artifact GibbsSeaWater 1.7 MiB Installed artifact Libiconv 1.9 MiB Installed artifact Hwloc 3.5 MiB Installed artifact FFTW 2.2 MiB Installed artifact MPICH 8.8 MiB Installed artifact XML2 2.5 MiB Installed artifact CUDA_Compiler 129.0 MiB Installed artifact CUDA_Driver 137.4 MiB Updating `~/.julia/environments/v1.14/Project.toml` [a49af516] + OceanBioME v0.16.11 Updating `~/.julia/environments/v1.14/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [79e6a3ab] + Adapt v4.5.0 [a9b6321e] + Atomix v1.1.3 [ab4f0b2a] + BFloat16s v0.6.1 [fa961155] + CEnum v0.5.0 [052768ef] + CUDA v5.11.0 [1af6417a] + CUDA_Runtime_Discovery v1.0.0 [0b6fb165] + ChunkCodecCore v1.0.1 [4c0bbee4] + ChunkCodecLibZlib v1.0.0 [55437552] + ChunkCodecLibZstd v1.0.0 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [7445602f] + CubedSphere v0.3.4 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.5 [e2ba6199] + ExprTools v0.1.10 [21656369] + ExpressionExplorer v1.1.4 [7a1cc6ca] + FFTW v1.10.0 [5789e2e9] + FileIO v1.18.0 [0c68f7d7] + GPUArrays v11.4.1 [46192b85] + GPUArraysCore v0.2.0 [61eb1bfa] + GPUCompiler v1.9.1 [096a3bc2] + GPUToolbox v1.1.1 [9a22fb26] + GibbsSeaWater v0.1.4 [c27321d9] + Glob v1.4.0 [076d061b] + HashArrayMappedTries v0.2.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.6.4 [692b3bcd] + JLLWrappers v1.7.1 [63c18a36] + KernelAbstractions v0.9.41 [ba0b0d4f] + Krylov v0.10.6 [929cbde3] + LLVM v9.4.6 [8b046642] + LLVMLoopInfo v1.0.0 [b964fa9f] + LaTeXStrings v1.4.0 [da04e1cc] + MPI v0.20.24 [3da0fdf6] + MPIPreferences v0.1.12 [1914dd2f] + MacroTools v0.5.16 [46d2c3a1] + MuladdMacro v0.2.4 [5da4648a] + NVTX v1.0.3 [a49af516] + OceanBioME v0.16.11 [9e8cae18] + Oceananigans v0.106.4 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [eebad327] + PkgVersion v0.3.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.2 [08abe8d2] + PrettyTables v3.3.2 [94ee1d12] + Quaternions v0.7.7 [74087812] + Random123 v1.7.1 [e6cf234a] + RandomNumbers v1.6.0 [a3311ec8] + ReactantCore v0.1.19 [c1ae055f] + RealDot v0.1.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [6038ab10] + Rotations v1.7.1 [7e506255] + ScopedValues v1.6.0 [6c6a2e73] + Scratch v1.3.0 [d496a93d] + SeawaterPolynomials v0.3.10 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [892a3eda] + StringManipulation v0.4.4 [09ab397b] + StructArrays v0.7.3 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 ⌅ [6aa5eb33] + TaylorSeries v0.20.10 [e689c965] + Tracy v0.1.6 [013be700] + UnsafeAtomics v0.3.1 [d1e2174e] + CUDA_Compiler_jll v0.4.2+0 [4ee394cb] + CUDA_Driver_jll v13.2.0+0 [76a88914] + CUDA_Runtime_jll v0.21.0+0 [f5851436] + FFTW_jll v3.3.11+0 [6727f6b2] + GibbsSeaWater_jll v3.5.2+0 [e33a78d0] + Hwloc_jll v2.13.0+1 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [9c1d0b0a] + JuliaNVTXCallbacks_jll v0.2.1+0 [dad2f222] + LLVMExtra_jll v0.0.38+0 [ad6e5548] + LibTracyClient_jll v0.13.1+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 [b5ada748] + MPIABI_jll v0.1.3+0 [7cb0a576] + MPICH_jll v5.0.0+0 [f1f71cc9] + MPItrampoline_jll v5.5.5+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [e98f9f5b] + NVTX_jll v3.2.2+0 [fe0851c0] + OpenMPI_jll v5.0.10+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [1e29f10c] + demumble_jll v1.3.0+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.19.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2026.3.19 [4536629a] + OpenBLAS_jll v0.3.30+0 [458c3c95] + OpenSSL_jll v3.5.5+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.2+0 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.1+0 [3f19e933] + p7zip_jll v17.8.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building GibbsSeaWater → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/f4318e7a751703a5db8b57c112e5cd5c218d296b/build.log` Installation completed after 57.71s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling project... 5107.6 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompiling project... 4428.5 ms ✓ MacroTools 1210.2 ms ✓ CUDA_Runtime_Discovery 859.2 ms ✓ Reexport 1170.9 ms ✓ ConstructionBase 813.5 ms ✓ DataValueInterfaces 926.6 ms ✓ StatsAPI 906.5 ms ✓ LazilyInitializedFields 855.7 ms ✓ CEnum 1309.9 ms ✓ TranscodingStreams 973.6 ms ✓ LaTeXStrings 1041.4 ms ✓ ChunkCodecCore 988.7 ms ✓ Glob 1169.5 ms ✓ SeawaterPolynomials 1216.0 ms ✓ Statistics 1008.5 ms ✓ StaticArraysCore 880.8 ms ✓ SimpleBufferStream 807.4 ms ✓ LLVMLoopInfo 1089.4 ms ✓ ANSIColoredPrinters 941.5 ms ✓ DataAPI 845.6 ms ✓ RealDot 1306.8 ms ✓ URIs 3681.9 ms ✓ UnsafeAtomics 1699.9 ms ✓ RandomNumbers 928.8 ms ✓ BitFlags 1186.0 ms ✓ AbstractTrees 862.0 ms ✓ MuladdMacro 1112.5 ms ✓ AbstractFFTs 1014.0 ms ✓ ExprTools 1544.1 ms ✓ OrderedCollections 987.9 ms ✓ HashArrayMappedTries 1210.2 ms ✓ DocStringExtensions 1736.3 ms ✓ OffsetArrays 1624.4 ms ✓ ExpressionExplorer 837.8 ms ✓ IteratorInterfaceExtensions 2019.8 ms ✓ Crayons 897.3 ms ✓ IOCapture 1278.5 ms ✓ Requires 1642.6 ms ✓ ConcurrentUtilities 15804.8 ms ✓ Krylov 1474.5 ms ✓ BFloat16s 1357.1 ms ✓ Scratch 1538.7 ms ✓ LoggingExtras 1893.3 ms ✓ StructUtils 7817.2 ms ✓ TaylorSeries 1396.1 ms ✓ PrecompileTools 2421.4 ms ✓ MPIPreferences 1757.2 ms ✓ ExceptionUnwrapping 2453.5 ms ✓ LibTracyClient_jll 1616.3 ms ✓ MicrosoftMPI_jll 2406.9 ms ✓ JuliaNVTXCallbacks_jll 2377.7 ms ✓ NVTX_jll 2431.8 ms ✓ Git_LFS_jll 2377.4 ms ✓ FFTW_jll 2206.6 ms ✓ OpenSSH_jll 1842.0 ms ✓ demumble_jll 1803.2 ms ✓ Xorg_libpciaccess_jll 1855.7 ms ✓ Libiconv_jll 1868.1 ms ✓ MbedTLS_jll 1817.5 ms ✓ GibbsSeaWater_jll 1768.0 ms ✓ Expat_jll 3483.8 ms ✓ PkgVersion 4521.3 ms ✓ IntelOpenMP_jll 4008.4 ms ✓ LLVMExtra_jll 5104.1 ms ✓ oneTBB_jll 6402.3 ms ✓ CUDA_Compiler_jll 872.0 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 6233.0 ms ✓ RegistryInstances 1143.4 ms ✓ CodecZlib 1152.4 ms ✓ ChunkCodecLibZlib 1251.4 ms ✓ ChunkCodecLibZstd 1548.3 ms ✓ Statistics → SparseArraysExt 1622.5 ms ✓ Distances 1200.1 ms ✓ Quaternions 1020.4 ms ✓ Atomix 1949.9 ms ✓ Random123 4505.1 ms ✓ OpenSSL 1910.6 ms ✓ MarkdownAST 4438.5 ms ✓ AbstractFFTs → AbstractFFTsTestExt 1031.2 ms ✓ ScopedValues 2142.9 ms ✓ ReactantCore 862.5 ms ✓ TableTraits 1055.3 ms ✓ Adapt 9710.0 ms ✓ FileIO 1198.4 ms ✓ StructUtils → StructUtilsStaticArraysCoreExt 4110.1 ms ✓ StringManipulation 13646.3 ms ✓ StaticArrays 17083.7 ms ✓ Parsers 5498.1 ms ✓ MPItrampoline_jll 2932.4 ms ✓ Tracy 1812.9 ms ✓ NVTX 2500.4 ms ✓ XML2_jll 2539.2 ms ✓ MbedTLS 2338.5 ms ✓ GibbsSeaWater 2570.0 ms ✓ Git_jll ┌ Warning: LLVM.jl has not been tested with LLVM versions newer than 20. └ @ LLVM.API ~/.julia/packages/LLVM/fEIbx/src/LLVM.jl:43 16171.5 ms ✓ LLVM  Downloading artifact: IntelOpenMP  Downloading artifact: oneTBB 11225.0 ms ✓ MKL_jll 1495.0 ms ✓ Distances → DistancesSparseArraysExt 2120.5 ms ✓ Tables 1586.8 ms ✓ Adapt → AdaptSparseArraysExt 1335.2 ms ✓ GPUArraysCore 898.8 ms ✓ OffsetArrays → OffsetArraysAdaptExt 48365.7 ms ✓ JLD2 1870.3 ms ✓ StaticArrays → StaticArraysStatisticsExt 1825.8 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 3384.0 ms ✓ TaylorSeries → TaylorSeriesSAExt 6026.6 ms ✓ Rotations 1855.3 ms ✓ Adapt → AdaptStaticArraysExt 8110.1 ms ✓ JSON 2382.5 ms ✓ Hwloc_jll 26133.2 ms ✓ HTTP 1332.8 ms ✓ Git ┌ Error: LLVM extensions library unavailable for your platform: │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+21.asserts-julia_version+1.14.0 │ LLVM.jl will not be functional. │ │ If you are using a custom version of LLVM, try building a │ custom version of LLVMExtra_jll using `deps/build_local.jl` └ @ LLVM ~/.julia/packages/LLVM/fEIbx/src/LLVM.jl:98 5724.3 ms ✓ GPUToolbox ┌ Error: LLVM extensions library unavailable for your platform: │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+21.asserts-julia_version+1.14.0 │ LLVM.jl will not be functional. │ │ If you are using a custom version of LLVM, try building a │ custom version of LLVMExtra_jll using `deps/build_local.jl` └ @ LLVM ~/.julia/packages/LLVM/fEIbx/src/LLVM.jl:98 5520.3 ms ✓ LLVM → BFloat16sExt ┌ Error: LLVM extensions library unavailable for your platform: │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+21.asserts-julia_version+1.14.0 │ LLVM.jl will not be functional. │ │ If you are using a custom version of LLVM, try building a │ custom version of LLVMExtra_jll using `deps/build_local.jl` └ @ LLVM ~/.julia/packages/LLVM/fEIbx/src/LLVM.jl:98 6466.8 ms ✓ UnsafeAtomics → UnsafeAtomicsLLVM ┌ Error: LLVM extensions library unavailable for your platform: │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+21.asserts-julia_version+1.14.0 │ LLVM.jl will not be functional. │ │ If you are using a custom version of LLVM, try building a │ custom version of LLVMExtra_jll using `deps/build_local.jl` └ @ LLVM ~/.julia/packages/LLVM/fEIbx/src/LLVM.jl:98 ERROR: LoadError: could not load symbol "LLVMOrcThreadSafeContextGetContext": /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl: undefined symbol: LLVMOrcThreadSafeContextGetContext Stacktrace:  [1] LLVMOrcThreadSafeContextGetContext  @ ~/.julia/packages/LLVM/fEIbx/lib/20/libLLVM.jl:10922 [inlined]  [2] context  @ ~/.julia/packages/LLVM/fEIbx/src/executionengine/ts_module.jl:50 [inlined]  [3] JuliaContext(f::GPUCompiler.var"#150#151"{GPUCompiler.CompilerJob{GPUCompiler.NativeCompilerTarget, GPUCompiler.var"##156".DummyCompilerParams}}; kwargs::@Kwargs{})  @ GPUCompiler ~/.julia/packages/GPUCompiler/Yuvf5/src/driver.jl:31  [4] JuliaContext(f::Function)  @ GPUCompiler ~/.julia/packages/GPUCompiler/Yuvf5/src/driver.jl:25  [5] macro expansion  @ ~/.julia/packages/GPUCompiler/Yuvf5/src/precompile.jl:34 [inlined]  [6] macro expansion  @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:73 [inlined]  [7] macro expansion  @ ~/.julia/packages/GPUCompiler/Yuvf5/src/precompile.jl:25 [inlined]  [8] macro expansion  @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:121 [inlined]  [9] top-level scope  @ ~/.julia/packages/GPUCompiler/Yuvf5/src/precompile.jl:118  [10] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:324  [11] top-level scope  @ ~/.julia/packages/GPUCompiler/Yuvf5/src/GPUCompiler.jl:70  [12] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3294  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3136  [17] include_string  @ ./loading.jl:3146 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [19] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/GPUCompiler/Yuvf5/src/precompile.jl:3 in expression starting at /home/pkgeval/.julia/packages/GPUCompiler/Yuvf5/src/GPUCompiler.jl:1 in expression starting at stdin:5 ✗ GPUCompiler 7647.0 ms ✓ FFTW 2930.3 ms ✓ CubedSphere 1746.4 ms ✓ StructArrays 1250.4 ms ✓ StructUtils → StructUtilsTablesExt 41251.0 ms ✓ PrettyTables 6828.6 ms ✓ TaylorSeries → TaylorSeriesJLD2Ext 9008.1 ms ✓ KernelAbstractions 2360.9 ms ✓ MPICH_jll 5528.3 ms ✓ OpenMPI_jll 5333.3 ms ✓ MPIABI_jll 5738.3 ms ✓ DataDeps 7017.2 ms ✓ FileIO → HTTPExt 53093.2 ms ✓ Documenter 1680.3 ms ✓ StructArrays → StructArraysSparseArraysExt 1006.2 ms ✓ StructArrays → StructArraysLinearAlgebraExt 992.7 ms ✓ StructArrays → StructArraysAdaptExt 1996.0 ms ✓ StructArrays → StructArraysStaticArraysExt 3342.3 ms ✓ KernelAbstractions → SparseArraysExt 2463.2 ms ✓ KernelAbstractions → LinearAlgebraExt 2518.4 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 11722.8 ms ✓ MPI ┌ Error: LLVM extensions library unavailable for your platform: │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+21.asserts-julia_version+1.14.0 │ LLVM.jl will not be functional. │ │ If you are using a custom version of LLVM, try building a │ custom version of LLVMExtra_jll using `deps/build_local.jl` └ @ LLVM ~/.julia/packages/LLVM/fEIbx/src/LLVM.jl:98 15070.6 ms ✓ GPUArrays 53385.6 ms ✓ Oceananigans ┌ Error: LLVM extensions library unavailable for your platform: │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+21.asserts-julia_version+1.14.0 │ LLVM.jl will not be functional. │ │ If you are using a custom version of LLVM, try building a │ custom version of LLVMExtra_jll using `deps/build_local.jl` └ @ LLVM ~/.julia/packages/LLVM/fEIbx/src/LLVM.jl:98 9408.3 ms ✓ GPUArrays → JLD2Ext ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("61eb1bfa-7361-4325-ad38-22787b887f55"), "GPUCompiler") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2841  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2695  [4] macro expansion  @ ./loading.jl:2622 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2586  [7] require  @ ./loading.jl:2562 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/CUDA/Il00B/src/CUDA.jl:3  [13] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3294  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3136  [18] include_string  @ ./loading.jl:3146 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [20] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/CUDA/Il00B/src/CUDA.jl:1 in expression starting at stdin:5 ✗ CUDA ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("052768ef-5323-5732-b1bb-66c8b64840ba"), "CUDA") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2841  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2695  [4] macro expansion  @ ./loading.jl:2622 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2586  [7] require  @ ./loading.jl:2562 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})  @ Base ./module.jl:101  [11] top-level scope  @ ~/.julia/packages/Atomix/7G0aL/ext/AtomixCUDAExt.jl:5  [12] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3294  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3136  [17] include_string  @ ./loading.jl:3146 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [19] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/Atomix/7G0aL/ext/AtomixCUDAExt.jl:2 in expression starting at stdin:5 ✗ Atomix → AtomixCUDAExt ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("052768ef-5323-5732-b1bb-66c8b64840ba"), "CUDA") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2841  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2695  [4] macro expansion  @ ./loading.jl:2622 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2586  [7] require  @ ./loading.jl:2562 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr)  @ Base ./module.jl:111  [10] top-level scope  @ ~/.julia/packages/MPI/VBXZG/ext/CUDAExt.jl:4  [11] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [12] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3294  [13] top-level scope  @ stdin:5  [14] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [15] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3136  [16] include_string  @ ./loading.jl:3146 [inlined]  [17] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [18] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/MPI/VBXZG/ext/CUDAExt.jl:1 in expression starting at stdin:5 ✗ MPI → CUDAExt ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("052768ef-5323-5732-b1bb-66c8b64840ba"), "CUDA") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2841  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2695  [4] macro expansion  @ ./loading.jl:2622 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2586  [7] require  @ ./loading.jl:2562 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})  @ Base ./module.jl:101  [11] top-level scope  @ ~/.julia/packages/Oceananigans/Iwlpt/ext/OceananigansCUDAExt.jl:4  [12] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3294  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3136  [17] include_string  @ ./loading.jl:3146 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [19] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/Oceananigans/Iwlpt/ext/OceananigansCUDAExt.jl:1 in expression starting at stdin:5 ✗ Oceananigans → OceananigansCUDAExt ┌ Warning: You are using Julia v1.13 or later!" │ Oceananigans is currently tested on Julia v1.12." │ If you find issues with Julia v1.13 or later," │ please report at https://github.com/CliMA/Oceananigans.jl/issues/new └ @ Oceananigans ~/.julia/packages/Oceananigans/Iwlpt/src/Oceananigans.jl:126 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("052768ef-5323-5732-b1bb-66c8b64840ba"), "CUDA") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2841  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2695  [4] macro expansion  @ ./loading.jl:2622 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2586  [7] require  @ ./loading.jl:2562 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/OceanBioME/KWUml/src/Particles/atomic_operations.jl:3  [13] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:324  [14] top-level scope  @ ~/.julia/packages/OceanBioME/KWUml/src/Particles/Particles.jl:54  [15] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:324  [16] top-level scope  @ ~/.julia/packages/OceanBioME/KWUml/src/OceanBioME.jl:215  [17] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [18] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3294  [19] top-level scope  @ stdin:5  [20] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [21] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3136  [22] include_string  @ ./loading.jl:3146 [inlined]  [23] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [24] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/OceanBioME/KWUml/src/Particles/atomic_operations.jl:3 in expression starting at /home/pkgeval/.julia/packages/OceanBioME/KWUml/src/Particles/Particles.jl:1 in expression starting at /home/pkgeval/.julia/packages/OceanBioME/KWUml/src/OceanBioME.jl:1 in expression starting at stdin:5 ✗ OceanBioME 138 dependencies successfully precompiled in 709 seconds. 41 already precompiled. 7 dependencies had output during precompilation: ┌ UnsafeAtomics → UnsafeAtomicsLLVM │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+21.asserts-julia_version+1.14.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/fEIbx/src/LLVM.jl:98 └ ┌ GPUArrays │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+21.asserts-julia_version+1.14.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/fEIbx/src/LLVM.jl:98 └ ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ ┌ GPUArrays → JLD2Ext │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+21.asserts-julia_version+1.14.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/fEIbx/src/LLVM.jl:98 └ ┌ LLVM │ ┌ Warning: LLVM.jl has not been tested with LLVM versions newer than 20. │ └ @ LLVM.API ~/.julia/packages/LLVM/fEIbx/src/LLVM.jl:43 └ ┌ GPUToolbox │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+21.asserts-julia_version+1.14.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/fEIbx/src/LLVM.jl:98 └ ┌ LLVM → BFloat16sExt │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+21.asserts-julia_version+1.14.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/fEIbx/src/LLVM.jl:98 └ Precompilation completed after 775.43s ################################################################################ # Testing # Testing OceanBioME Status `/tmp/jl_LnAxAD/Project.toml` [79e6a3ab] Adapt v4.5.0 [a9b6321e] Atomix v1.1.3 [052768ef] CUDA v5.11.0 [124859b0] DataDeps v0.7.13 [e30172f5] Documenter v1.17.0 [9a22fb26] GibbsSeaWater v0.1.4 [033835bb] JLD2 v0.6.4 [63c18a36] KernelAbstractions v0.9.41 [a49af516] OceanBioME v0.16.11 [9e8cae18] Oceananigans v0.106.4 [6fe1bfb0] OffsetArrays v1.17.0 [d496a93d] SeawaterPolynomials v0.3.10 [10745b16] Statistics v1.11.1 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_LnAxAD/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.5.0 [a9b6321e] Atomix v1.1.3 [ab4f0b2a] BFloat16s v0.6.1 [d1d4a3ce] BitFlags v0.1.9 [fa961155] CEnum v0.5.0 [052768ef] CUDA v5.11.0 [1af6417a] CUDA_Runtime_Discovery v1.0.0 [0b6fb165] ChunkCodecCore v1.0.1 [4c0bbee4] ChunkCodecLibZlib v1.0.0 [55437552] ChunkCodecLibZstd v1.0.0 [944b1d66] CodecZlib v0.7.8 [f0e56b4a] ConcurrentUtilities v2.5.1 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [7445602f] CubedSphere v0.3.4 [9a962f9c] DataAPI v1.16.0 [124859b0] DataDeps v0.7.13 [e2d170a0] DataValueInterfaces v1.0.0 [b4f34e82] Distances v0.10.12 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.17.0 [460bff9d] ExceptionUnwrapping v0.1.11 [e2ba6199] ExprTools v0.1.10 [21656369] ExpressionExplorer v1.1.4 [7a1cc6ca] FFTW v1.10.0 [5789e2e9] FileIO v1.18.0 [0c68f7d7] GPUArrays v11.4.1 [46192b85] GPUArraysCore v0.2.0 [61eb1bfa] GPUCompiler v1.9.1 [096a3bc2] GPUToolbox v1.1.1 [9a22fb26] GibbsSeaWater v0.1.4 [d7ba0133] Git v1.5.0 [c27321d9] Glob v1.4.0 [cd3eb016] HTTP v1.11.0 [076d061b] HashArrayMappedTries v0.2.0 [b5f81e59] IOCapture v1.0.0 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.6.4 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.5.0 [63c18a36] KernelAbstractions v0.9.41 [ba0b0d4f] Krylov v0.10.6 [929cbde3] LLVM v9.4.6 [8b046642] LLVMLoopInfo v1.0.0 [b964fa9f] LaTeXStrings v1.4.0 [0e77f7df] LazilyInitializedFields v1.3.0 [e6f89c97] LoggingExtras v1.2.0 [da04e1cc] MPI v0.20.24 [3da0fdf6] MPIPreferences v0.1.12 [1914dd2f] MacroTools v0.5.16 [d0879d2d] MarkdownAST v0.1.3 [739be429] MbedTLS v1.1.10 [46d2c3a1] MuladdMacro v0.2.4 [5da4648a] NVTX v1.0.3 [a49af516] OceanBioME v0.16.11 [9e8cae18] Oceananigans v0.106.4 [6fe1bfb0] OffsetArrays v1.17.0 [4d8831e6] OpenSSL v1.6.1 [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [eebad327] PkgVersion v0.3.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.2 [08abe8d2] PrettyTables v3.3.2 [94ee1d12] Quaternions v0.7.7 [74087812] Random123 v1.7.1 [e6cf234a] RandomNumbers v1.6.0 [a3311ec8] ReactantCore v0.1.19 [c1ae055f] RealDot v0.1.0 [189a3867] Reexport v1.2.2 [2792f1a3] RegistryInstances v0.1.0 [ae029012] Requires v1.3.1 [6038ab10] Rotations v1.7.1 [7e506255] ScopedValues v1.6.0 [6c6a2e73] Scratch v1.3.0 [d496a93d] SeawaterPolynomials v0.3.10 [777ac1f9] SimpleBufferStream v1.2.0 [90137ffa] StaticArrays v1.9.18 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.8.0 [892a3eda] StringManipulation v0.4.4 [09ab397b] StructArrays v0.7.3 [ec057cc2] StructUtils v2.7.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 ⌅ [6aa5eb33] TaylorSeries v0.20.10 [e689c965] Tracy v0.1.6 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.6.1 [013be700] UnsafeAtomics v0.3.1 [d1e2174e] CUDA_Compiler_jll v0.4.2+0 [4ee394cb] CUDA_Driver_jll v13.2.0+0 [76a88914] CUDA_Runtime_jll v0.21.0+0 [2e619515] Expat_jll v2.7.3+0 [f5851436] FFTW_jll v3.3.11+0 [6727f6b2] GibbsSeaWater_jll v3.5.2+0 [020c3dae] Git_LFS_jll v3.7.0+0 [f8c6e375] Git_jll v2.53.0+0 [e33a78d0] Hwloc_jll v2.13.0+1 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [9c1d0b0a] JuliaNVTXCallbacks_jll v0.2.1+0 [dad2f222] LLVMExtra_jll v0.0.38+0 [ad6e5548] LibTracyClient_jll v0.13.1+0 [94ce4f54] Libiconv_jll v1.18.0+0 [856f044c] MKL_jll v2025.2.0+0 [b5ada748] MPIABI_jll v0.1.3+0 [7cb0a576] MPICH_jll v5.0.0+0 [f1f71cc9] MPItrampoline_jll v5.5.5+0 [c8ffd9c3] MbedTLS_jll v2.28.1010+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [e98f9f5b] NVTX_jll v3.2.2+0 [fe0851c0] OpenMPI_jll v5.0.10+0 [9bd350c2] OpenSSH_jll v10.3.1+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0 [1e29f10c] demumble_jll v1.3.0+0 [1317d2d5] oneTBB_jll v2022.0.0+1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.19.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2026.3.19 [4536629a] OpenBLAS_jll v0.3.30+0 [458c3c95] OpenSSL_jll v3.5.5+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.2+0 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.1+0 [3f19e933] p7zip_jll v17.8.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Error: LLVM extensions library unavailable for your platform: │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+21.asserts-julia_version+1.14.0 │ LLVM.jl will not be functional. │ │ If you are using a custom version of LLVM, try building a │ custom version of LLVMExtra_jll using `deps/build_local.jl` └ @ LLVM ~/.julia/packages/LLVM/fEIbx/src/LLVM.jl:98 ERROR: LoadError: could not load symbol "LLVMOrcThreadSafeContextGetContext": /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl: undefined symbol: LLVMOrcThreadSafeContextGetContext Stacktrace:  [1] LLVMOrcThreadSafeContextGetContext  @ ~/.julia/packages/LLVM/fEIbx/lib/20/libLLVM.jl:10922 [inlined]  [2] context  @ ~/.julia/packages/LLVM/fEIbx/src/executionengine/ts_module.jl:50 [inlined]  [3] JuliaContext(f::GPUCompiler.var"#150#151"{GPUCompiler.CompilerJob{GPUCompiler.NativeCompilerTarget, GPUCompiler.var"##156".DummyCompilerParams}}; kwargs::@Kwargs{})  @ GPUCompiler ~/.julia/packages/GPUCompiler/Yuvf5/src/driver.jl:31  [4] JuliaContext(f::Function)  @ GPUCompiler ~/.julia/packages/GPUCompiler/Yuvf5/src/driver.jl:25  [5] macro expansion  @ ~/.julia/packages/GPUCompiler/Yuvf5/src/precompile.jl:34 [inlined]  [6] macro expansion  @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:73 [inlined]  [7] macro expansion  @ ~/.julia/packages/GPUCompiler/Yuvf5/src/precompile.jl:25 [inlined]  [8] macro expansion  @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:121 [inlined]  [9] top-level scope  @ ~/.julia/packages/GPUCompiler/Yuvf5/src/precompile.jl:118  [10] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:324  [11] top-level scope  @ ~/.julia/packages/GPUCompiler/Yuvf5/src/GPUCompiler.jl:70  [12] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3294  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3136  [17] include_string  @ ./loading.jl:3146 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [19] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/GPUCompiler/Yuvf5/src/precompile.jl:3 in expression starting at /home/pkgeval/.julia/packages/GPUCompiler/Yuvf5/src/GPUCompiler.jl:1 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("61eb1bfa-7361-4325-ad38-22787b887f55"), "GPUCompiler") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2841  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2695  [4] macro expansion  @ ./loading.jl:2622 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2586  [7] require  @ ./loading.jl:2562 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/CUDA/Il00B/src/CUDA.jl:3  [13] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3294  [15] top-level scope  @ stdin:5  [16] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3136  [18] include_string  @ ./loading.jl:3146 [inlined]  [19] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [20] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/CUDA/Il00B/src/CUDA.jl:1 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("052768ef-5323-5732-b1bb-66c8b64840ba"), "CUDA") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2841  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2695  [4] macro expansion  @ ./loading.jl:2622 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2586  [7] require  @ ./loading.jl:2562 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})  @ Base ./module.jl:101  [11] top-level scope  @ ~/.julia/packages/Atomix/7G0aL/ext/AtomixCUDAExt.jl:5  [12] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3294  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3136  [17] include_string  @ ./loading.jl:3146 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [19] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/Atomix/7G0aL/ext/AtomixCUDAExt.jl:2 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("052768ef-5323-5732-b1bb-66c8b64840ba"), "CUDA") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2841  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2695  [4] macro expansion  @ ./loading.jl:2622 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2586  [7] require  @ ./loading.jl:2562 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr)  @ Base ./module.jl:111  [10] top-level scope  @ ~/.julia/packages/MPI/VBXZG/ext/CUDAExt.jl:4  [11] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [12] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3294  [13] top-level scope  @ stdin:5  [14] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [15] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3136  [16] include_string  @ ./loading.jl:3146 [inlined]  [17] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [18] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/MPI/VBXZG/ext/CUDAExt.jl:1 in expression starting at stdin:5 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("052768ef-5323-5732-b1bb-66c8b64840ba"), "CUDA") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2841  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2695  [4] macro expansion  @ ./loading.jl:2622 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2586  [7] require  @ ./loading.jl:2562 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})  @ Base ./module.jl:101  [11] top-level scope  @ ~/.julia/packages/Oceananigans/Iwlpt/ext/OceananigansCUDAExt.jl:4  [12] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3294  [14] top-level scope  @ stdin:5  [15] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3136  [17] include_string  @ ./loading.jl:3146 [inlined]  [18] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [19] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/Oceananigans/Iwlpt/ext/OceananigansCUDAExt.jl:1 in expression starting at stdin:5 ┌ Warning: You are using Julia v1.13 or later!" │ Oceananigans is currently tested on Julia v1.12." │ If you find issues with Julia v1.13 or later," │ please report at https://github.com/CliMA/Oceananigans.jl/issues/new └ @ Oceananigans ~/.julia/packages/Oceananigans/Iwlpt/src/Oceananigans.jl:126 ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("052768ef-5323-5732-b1bb-66c8b64840ba"), "CUDA") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) Stacktrace:  [1] error(s::String)  @ Base ./error.jl:56  [2] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2841  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2695  [4] macro expansion  @ ./loading.jl:2622 [inlined]  [5] macro expansion  @ ./lock.jl:376 [inlined]  [6] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2586  [7] require  @ ./loading.jl:2562 [inlined]  [8] eval_import_path  @ ./module.jl:36 [inlined]  [9] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [10] _eval_using  @ ./module.jl:137 [inlined]  [11] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [12] top-level scope  @ ~/.julia/packages/OceanBioME/KWUml/src/Particles/atomic_operations.jl:3  [13] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:324  [14] top-level scope  @ ~/.julia/packages/OceanBioME/KWUml/src/Particles/Particles.jl:54  [15] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:324  [16] top-level scope  @ ~/.julia/packages/OceanBioME/KWUml/src/OceanBioME.jl:215  [17] include(mod::Module, _path::String)  @ Base ./Base.jl:323  [18] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3294  [19] top-level scope  @ stdin:5  [20] eval(m::Module, e::Any)  @ Core ./boot.jl:517  [21] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3136  [22] include_string  @ ./loading.jl:3146 [inlined]  [23] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [24] _start()  @ Base ./client.jl:585 in expression starting at /home/pkgeval/.julia/packages/OceanBioME/KWUml/src/Particles/atomic_operations.jl:3 in expression starting at /home/pkgeval/.julia/packages/OceanBioME/KWUml/src/Particles/Particles.jl:1 in expression starting at /home/pkgeval/.julia/packages/OceanBioME/KWUml/src/OceanBioME.jl:1 in expression starting at stdin:5 6 dependencies had output during precompilation: ┌ MPI → CUDAExt │ ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("052768ef-5323-5732-b1bb-66c8b64840ba"), "CUDA") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:56 │ [2] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2841 │ [3] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2695 │ [4] macro expansion │ @ ./loading.jl:2622 [inlined] │ [5] macro expansion │ @ ./lock.jl:376 [inlined] │ [6] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2586 │ [7] require │ @ ./loading.jl:2562 [inlined] │ [8] eval_import_path │ @ ./module.jl:36 [inlined] │ [9] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr) │ @ Base ./module.jl:111 │ [10] top-level scope │ @ ~/.julia/packages/MPI/VBXZG/ext/CUDAExt.jl:4 │ [11] include(mod::Module, _path::String) │ @ Base ./Base.jl:323 │ [12] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3294 │ [13] top-level scope │ @ stdin:5 │ [14] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [15] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3136 │ [16] include_string │ @ ./loading.jl:3146 [inlined] │ [17] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:342 │ [18] _start() │ @ Base ./client.jl:585 │ in expression starting at /home/pkgeval/.julia/packages/MPI/VBXZG/ext/CUDAExt.jl:1 │ in expression starting at stdin:5 └ ┌ Oceananigans → OceananigansCUDAExt │ ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("052768ef-5323-5732-b1bb-66c8b64840ba"), "CUDA") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:56 │ [2] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2841 │ [3] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2695 │ [4] macro expansion │ @ ./loading.jl:2622 [inlined] │ [5] macro expansion │ @ ./lock.jl:376 [inlined] │ [6] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2586 │ [7] require │ @ ./loading.jl:2562 [inlined] │ [8] eval_import_path │ @ ./module.jl:36 [inlined] │ [9] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) │ @ Base ./module.jl:101 │ [11] top-level scope │ @ ~/.julia/packages/Oceananigans/Iwlpt/ext/OceananigansCUDAExt.jl:4 │ [12] include(mod::Module, _path::String) │ @ Base ./Base.jl:323 │ [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3294 │ [14] top-level scope │ @ stdin:5 │ [15] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3136 │ [17] include_string │ @ ./loading.jl:3146 [inlined] │ [18] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:342 │ [19] _start() │ @ Base ./client.jl:585 │ in expression starting at /home/pkgeval/.julia/packages/Oceananigans/Iwlpt/ext/OceananigansCUDAExt.jl:1 │ in expression starting at stdin:5 └ ┌ OceanBioME │ [Output was shown above] └ ┌ GPUCompiler │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+21.asserts-julia_version+1.14.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/fEIbx/src/LLVM.jl:98 │ ERROR: LoadError: could not load symbol "LLVMOrcThreadSafeContextGetContext": │ /opt/julia/bin/../lib/julia/libLLVM.so.21.1jl: undefined symbol: LLVMOrcThreadSafeContextGetContext │ Stacktrace: │ [1] LLVMOrcThreadSafeContextGetContext │ @ ~/.julia/packages/LLVM/fEIbx/lib/20/libLLVM.jl:10922 [inlined] │ [2] context │ @ ~/.julia/packages/LLVM/fEIbx/src/executionengine/ts_module.jl:50 [inlined] │ [3] JuliaContext(f::GPUCompiler.var"#150#151"{GPUCompiler.CompilerJob{GPUCompiler.NativeCompilerTarget, GPUCompiler.var"##156".DummyCompilerParams}}; kwargs::@Kwargs{}) │ @ GPUCompiler ~/.julia/packages/GPUCompiler/Yuvf5/src/driver.jl:31 │ [4] JuliaContext(f::Function) │ @ GPUCompiler ~/.julia/packages/GPUCompiler/Yuvf5/src/driver.jl:25 │ [5] macro expansion │ @ ~/.julia/packages/GPUCompiler/Yuvf5/src/precompile.jl:34 [inlined] │ [6] macro expansion │ @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:73 [inlined] │ [7] macro expansion │ @ ~/.julia/packages/GPUCompiler/Yuvf5/src/precompile.jl:25 [inlined] │ [8] macro expansion │ @ ~/.julia/packages/PrecompileTools/gn08A/src/workloads.jl:121 [inlined] │ [9] top-level scope │ @ ~/.julia/packages/GPUCompiler/Yuvf5/src/precompile.jl:118 │ [10] include(mapexpr::Function, mod::Module, _path::String) │ @ Base ./Base.jl:324 │ [11] top-level scope │ @ ~/.julia/packages/GPUCompiler/Yuvf5/src/GPUCompiler.jl:70 │ [12] include(mod::Module, _path::String) │ @ Base ./Base.jl:323 │ [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3294 │ [14] top-level scope │ @ stdin:5 │ [15] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3136 │ [17] include_string │ @ ./loading.jl:3146 [inlined] │ [18] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:342 │ [19] _start() │ @ Base ./client.jl:585 │ in expression starting at /home/pkgeval/.julia/packages/GPUCompiler/Yuvf5/src/precompile.jl:3 │ in expression starting at /home/pkgeval/.julia/packages/GPUCompiler/Yuvf5/src/GPUCompiler.jl:1 │ in expression starting at stdin:5 └ ┌ CUDA │ ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("61eb1bfa-7361-4325-ad38-22787b887f55"), "GPUCompiler") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:56 │ [2] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2841 │ [3] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2695 │ [4] macro expansion │ @ ./loading.jl:2622 [inlined] │ [5] macro expansion │ @ ./lock.jl:376 [inlined] │ [6] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2586 │ [7] require │ @ ./loading.jl:2562 [inlined] │ [8] eval_import_path │ @ ./module.jl:36 [inlined] │ [9] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [10] _eval_using │ @ ./module.jl:137 [inlined] │ [11] _eval_using(to::Module, path::Expr) │ @ Base ./module.jl:137 │ [12] top-level scope │ @ ~/.julia/packages/CUDA/Il00B/src/CUDA.jl:3 │ [13] include(mod::Module, _path::String) │ @ Base ./Base.jl:323 │ [14] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3294 │ [15] top-level scope │ @ stdin:5 │ [16] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [17] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3136 │ [18] include_string │ @ ./loading.jl:3146 [inlined] │ [19] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:342 │ [20] _start() │ @ Base ./client.jl:585 │ in expression starting at /home/pkgeval/.julia/packages/CUDA/Il00B/src/CUDA.jl:1 │ in expression starting at stdin:5 └ ┌ Atomix → AtomixCUDAExt │ ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("052768ef-5323-5732-b1bb-66c8b64840ba"), "CUDA") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=1, inline=true, opt_level=0) │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:56 │ [2] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2841 │ [3] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2695 │ [4] macro expansion │ @ ./loading.jl:2622 [inlined] │ [5] macro expansion │ @ ./lock.jl:376 [inlined] │ [6] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2586 │ [7] require │ @ ./loading.jl:2562 [inlined] │ [8] eval_import_path │ @ ./module.jl:36 [inlined] │ [9] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [10] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) │ @ Base ./module.jl:101 │ [11] top-level scope │ @ ~/.julia/packages/Atomix/7G0aL/ext/AtomixCUDAExt.jl:5 │ [12] include(mod::Module, _path::String) │ @ Base ./Base.jl:323 │ [13] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ @ Base ./loading.jl:3294 │ [14] top-level scope │ @ stdin:5 │ [15] eval(m::Module, e::Any) │ @ Core ./boot.jl:517 │ [16] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:3136 │ [17] include_string │ @ ./loading.jl:3146 [inlined] │ [18] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:342 │ [19] _start() │ @ Base ./client.jl:585 │ in expression starting at /home/pkgeval/.julia/packages/Atomix/7G0aL/ext/AtomixCUDAExt.jl:2 │ in expression starting at stdin:5 └ ERROR: LoadError: The following 6 packages failed to precompile: MPI → CUDAExt Failed to precompile CUDAExt [1cc7a068-e20f-50aa-8bcb-70c7e6bf257f] to "/home/pkgeval/.julia/compiled/v1.14/CUDAExt/jl_5hF6aT" (ProcessExited(1)). Oceananigans → OceananigansCUDAExt Failed to precompile OceananigansCUDAExt [fad83df7-0f01-5b9a-9362-8f0e3be6b570] to "/home/pkgeval/.julia/compiled/v1.14/OceananigansCUDAExt/jl_KIeZcM" (ProcessExited(1)). OceanBioME Failed to precompile OceanBioME [a49af516-9db8-4be4-be45-1dad61c5a376] to "/home/pkgeval/.julia/compiled/v1.14/OceanBioME/jl_nuckGX" (ProcessExited(1)). GPUCompiler Failed to precompile GPUCompiler [61eb1bfa-7361-4325-ad38-22787b887f55] to "/home/pkgeval/.julia/compiled/v1.14/GPUCompiler/jl_Zq69Tf" (ProcessExited(1)). CUDA Failed to precompile CUDA [052768ef-5323-5732-b1bb-66c8b64840ba] to "/home/pkgeval/.julia/compiled/v1.14/CUDA/jl_nqxOtK" (ProcessExited(1)). Atomix → AtomixCUDAExt Failed to precompile AtomixCUDAExt [ce415717-2381-5707-99cb-8f08807515f2] to "/home/pkgeval/.julia/compiled/v1.14/AtomixCUDAExt/jl_DlyVmJ" (ProcessExited(1)). in expression starting at /home/pkgeval/.julia/packages/OceanBioME/KWUml/test/dependencies_for_runtests.jl:1 in expression starting at /home/pkgeval/.julia/packages/OceanBioME/KWUml/test/runtests.jl:1 Testing failed after 106.05s ERROR: LoadError: Package OceanBioME errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3160 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3025 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:586 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:562 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 [12] include(mod::Module, _path::String) @ Base ./Base.jl:323 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:585 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 1000.69s: package fails to precompile