Package evaluation of PhyloClustering on Julia 1.13.0-DEV.923 (d2bbd0af86*) started at 2025-07-30T23:09:06.623 ################################################################################ # Set-up # Set-up completed after 0.26s ################################################################################ # Installation # Installing PhyloClustering... Resolving package versions... Installed Libuuid_jll ───────────────── v2.41.0+0 Installed libaom_jll ────────────────── v3.12.1+0 Installed libass_jll ────────────────── v0.17.4+0 Installed ImageIO ───────────────────── v0.6.9 Installed Formatting ────────────────── v0.4.3 Installed MosaicViews ───────────────── v0.3.4 Installed MultivariateStats ─────────── v0.10.3 Installed PolygonOps ────────────────── v0.1.2 Installed HarfBuzz_jll ──────────────── v8.5.1+0 Installed Bzip2_jll ─────────────────── v1.0.9+0 Installed MKL_jll ───────────────────── v2025.2.0+0 Installed Cairo_jll ─────────────────── v1.18.5+0 Installed Libtiff_jll ───────────────── v4.7.1+0 Installed InlineStrings ─────────────── v1.4.4 Installed Extents ───────────────────── v0.1.6 Installed NearestNeighbors ──────────── v0.4.22 Installed OrderedCollections ────────── v1.8.1 Installed Graphite2_jll ─────────────── v1.3.15+0 Installed Fontconfig_jll ────────────── v2.16.0+0 Installed UnsafeArrays ──────────────── v1.0.8 Installed Functors ──────────────────── v0.4.12 Installed Giflib_jll ────────────────── v5.2.3+0 Installed SentinelArrays ────────────── v1.4.8 Installed FileIO ────────────────────── v1.17.0 Installed Graphics ──────────────────── v1.1.3 Installed Opus_jll ──────────────────── v1.5.2+0 Installed Distances ─────────────────── v0.10.12 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed NaNMath ───────────────────── v1.1.3 Installed QuadGK ────────────────────── v2.11.2 Installed ScopedValues ──────────────── v1.4.0 Installed AdaptivePredicates ────────── v1.2.0 Installed Ogg_jll ───────────────────── v1.3.6+0 Installed LZO_jll ───────────────────── v2.10.3+0 Installed Xorg_libxcb_jll ───────────── v1.17.1+0 Installed WoodburyMatrices ──────────── v1.0.0 Installed EnumX ─────────────────────── v1.0.5 Installed Tables ────────────────────── v1.12.1 Installed Reexport ──────────────────── v1.2.2 Installed Arpack ────────────────────── v0.5.4 Installed Missings ──────────────────── v1.2.0 Installed TableTraits ───────────────── v1.0.1 Installed LERC_jll ──────────────────── v4.0.1+0 Installed LLVMOpenMP_jll ────────────── v18.1.8+0 Installed LaTeXStrings ──────────────── v1.4.0 Installed Imath_jll ─────────────────── v3.1.11+0 Installed Preferences ───────────────── v1.4.3 Installed SortingAlgorithms ─────────── v1.2.1 Installed Grisu ─────────────────────── v1.0.2 Installed Crayons ───────────────────── v4.1.1 Installed Format ────────────────────── v1.3.7 Installed RangeArrays ───────────────── v0.3.2 Installed MappedArrays ──────────────── v0.4.2 Installed Inflate ───────────────────── v0.1.5 Installed MacroTools ────────────────── v0.5.16 Installed FillArrays ────────────────── v1.13.0 Installed DataStructures ────────────── v0.18.22 Installed CRlibm ────────────────────── v1.0.2 Installed ColorBrewer ───────────────── v0.4.1 Installed AbstractTrees ─────────────── v0.4.5 Installed OpenEXR_jll ───────────────── v3.2.4+0 Installed LazyModules ───────────────── v0.3.1 Installed Packing ───────────────────── v0.5.1 Installed ParallelKMeans ────────────── v1.1.0 Installed oneTBB_jll ────────────────── v2022.0.0+0 Installed DelimitedFiles ────────────── v1.9.1 Installed MakieCore ─────────────────── v0.7.3 Installed UnicodeFun ────────────────── v0.4.1 Installed x264_jll ──────────────────── v10164.0.1+0 Installed StatsBase ─────────────────── v0.33.21 Installed CodecZlib ─────────────────── v0.7.8 Installed Cairo ─────────────────────── v1.1.1 Installed Xorg_libXau_jll ───────────── v1.0.13+0 Installed IntelOpenMP_jll ───────────── v2025.2.0+0 Installed DataValueInterfaces ───────── v1.0.0 Installed Libffi_jll ────────────────── v3.4.7+0 Installed CEnum ─────────────────────── v0.5.0 Installed Observables ───────────────── v0.5.5 Installed Pixman_jll ────────────────── v0.44.2+0 Installed MathTeXEngine ─────────────── v0.5.7 Installed Expat_jll ─────────────────── v2.6.5+0 Installed libpng_jll ────────────────── v1.6.50+0 Installed CairoMakie ────────────────── v0.11.11 Installed IrrationalConstants ───────── v0.2.4 Installed Clustering ────────────────── v0.15.8 Installed SimpleTraits ──────────────── v0.9.4 Installed Contour ───────────────────── v0.6.3 Installed libfdk_aac_jll ────────────── v2.0.4+0 Installed isoband_jll ───────────────── v0.2.3+0 Installed StableRNGs ────────────────── v1.0.3 Installed RoundingEmulator ──────────── v0.2.1 Installed Interpolations ────────────── v0.16.1 Installed ImageMetadata ─────────────── v0.9.10 Installed libsixel_jll ──────────────── v1.10.5+0 Installed Scratch ───────────────────── v1.3.0 Installed FFMPEG_jll ────────────────── v6.1.3+0 Installed ColorVectorSpace ──────────── v0.10.0 Installed FASTX ─────────────────────── v2.1.7 Installed libwebp_jll ───────────────── v1.6.0+0 Installed PooledArrays ──────────────── v1.4.3 Installed ShaderAbstractions ────────── v0.4.1 Installed PDMats ────────────────────── v0.11.35 Installed CRlibm_jll ────────────────── v1.0.1+0 Installed WorkerUtilities ───────────── v1.6.1 Installed AxisArrays ────────────────── v0.4.7 Installed ImageCore ─────────────────── v0.10.5 Installed DocStringExtensions ───────── v0.9.5 Installed PNGFiles ──────────────────── v0.4.4 Installed JpegTurbo ─────────────────── v0.1.6 Installed BioSequences ──────────────── v3.5.0 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed PkgVersion ────────────────── v0.3.3 Installed FreeType ──────────────────── v4.1.1 Installed StackViews ────────────────── v0.1.2 Installed RelocatableFolders ────────── v1.0.1 Installed OpenBLASConsistentFPCSR_jll ─ v0.3.29+0 Installed StatsModels ───────────────── v0.7.4 Installed StringViews ───────────────── v1.3.4 Installed ColorSchemes ──────────────── v3.30.0 Installed KernelDensity ─────────────── v0.6.10 Installed AliasTables ───────────────── v1.1.3 Installed ShiftedArrays ─────────────── v2.0.0 Installed HashArrayMappedTries ──────── v0.2.0 Installed Combinatorics ─────────────── v1.0.3 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed DataAPI ───────────────────── v1.16.0 Installed SIMD ──────────────────────── v3.7.1 Installed InvertedIndices ───────────── v1.3.1 Installed Netpbm ────────────────────── v1.1.1 Installed StaticArraysCore ──────────── v1.4.3 Installed GaussianMixtures ──────────── v0.3.13 Installed Colors ────────────────────── v0.12.11 Installed Twiddle ───────────────────── v1.1.2 Installed ImageAxes ─────────────────── v0.6.12 Installed StaticArrays ──────────────── v1.9.14 Installed Libglvnd_jll ──────────────── v1.7.1+1 Installed AbstractFFTs ──────────────── v1.5.0 Installed AxisAlgorithms ────────────── v1.1.0 Installed QOI ───────────────────────── v1.0.1 Installed ColorTypes ────────────────── v0.11.5 Installed StringManipulation ────────── v0.4.1 Installed Glib_jll ──────────────────── v2.84.3+0 Installed Requires ──────────────────── v1.3.1 Installed BaseDirs ──────────────────── v1.3.2 Installed LogExpFunctions ───────────── v0.3.29 Installed PrettyTables ──────────────── v2.4.0 Installed JSON ──────────────────────── v0.21.4 Installed Parsers ───────────────────── v2.8.3 Installed FreeTypeAbstraction ───────── v0.10.8 Installed Rmath ─────────────────────── v0.8.0 Installed Arpack_jll ────────────────── v3.5.1+1 Installed BioGenerics ───────────────── v0.1.5 Installed CSV ───────────────────────── v0.10.15 Installed PhyloClustering ───────────── v0.2.0 Installed Distributions ─────────────── v0.25.120 Installed PhyloNetworks ─────────────── v0.16.4 Installed StatsFuns ─────────────────── v1.5.0 Installed FilePaths ─────────────────── v0.8.3 Installed OpenEXR ───────────────────── v0.3.3 Installed GeoFormatTypes ────────────── v0.4.4 Installed Xorg_libXdmcp_jll ─────────── v1.1.6+0 Installed GridLayoutBase ────────────── v0.10.2 Installed WeakRefStrings ────────────── v1.4.2 Installed JLLWrappers ───────────────── v1.7.1 Installed XZ_jll ────────────────────── v5.8.1+0 Installed x265_jll ──────────────────── v4.1.0+0 Installed SignedDistanceFields ──────── v0.4.0 Installed Pango_jll ─────────────────── v1.56.3+0 Installed GeometryBasics ────────────── v0.4.11 Installed DataFrames ────────────────── v1.7.0 Installed ExactPredicates ───────────── v2.2.8 Installed IterTools ─────────────────── v1.10.0 Installed NLopt ─────────────────────── v1.2.0 Installed Xorg_xtrans_jll ───────────── v1.6.0+0 Installed StatisticalTraits ─────────── v3.5.0 Installed FilePathsBase ─────────────── v0.9.24 Installed JpegTurbo_jll ─────────────── v3.1.1+0 Installed GLM ───────────────────────── v1.9.0 Installed TiffImages ────────────────── v0.11.4 Installed PaddedViews ───────────────── v0.5.12 Installed Adapt ─────────────────────── v4.3.0 Installed ConstructionBase ──────────── v1.6.0 Installed HypergeometricFunctions ───── v0.3.28 Installed JLD2 ──────────────────────── v0.5.15 Installed Libmount_jll ──────────────── v2.41.0+0 Installed TriplotBase ───────────────── v0.1.0 Installed Compat ────────────────────── v4.18.0 Installed Sixel ─────────────────────── v0.1.5 Installed Xorg_libX11_jll ───────────── v1.8.12+0 Installed PlotUtils ─────────────────── v1.4.3 Installed TranscodingStreams ────────── v0.11.3 Installed TensorCore ────────────────── v0.1.1 Installed Statistics ────────────────── v1.11.1 Installed EarCut_jll ────────────────── v2.2.4+0 Installed PrecompileTools ───────────── v1.3.2 Installed StatsAPI ──────────────────── v1.7.1 Installed ImageBase ─────────────────── v0.1.7 Installed StructArrays ──────────────── v0.6.21 Installed ProgressMeter ─────────────── v1.10.4 Installed OffsetArrays ──────────────── v1.17.0 Installed WebP ──────────────────────── v0.1.3 Installed BioSymbols ────────────────── v5.2.0 Installed GettextRuntime_jll ────────── v0.22.4+0 Installed Ratios ────────────────────── v0.4.5 Installed ChainRulesCore ────────────── v1.25.2 Installed FriBidi_jll ───────────────── v1.0.17+0 Installed Makie ─────────────────────── v0.20.10 Installed Animations ────────────────── v0.4.2 Installed LAME_jll ──────────────────── v3.100.3+0 Installed Xorg_libXrender_jll ───────── v0.9.12+0 Installed libvorbis_jll ─────────────── v1.3.8+0 Installed ScikitLearnBase ───────────── v0.5.0 Installed PtrArrays ─────────────────── v1.3.0 Installed ScientificTypesBase ───────── v3.0.0 Installed Isoband ───────────────────── v0.1.1 Installed FixedPointNumbers ─────────── v0.8.5 Installed SpecialFunctions ──────────── v2.5.1 Installed Showoff ───────────────────── v1.0.3 Installed IntervalSets ──────────────── v0.7.11 Installed IntervalArithmetic ────────── v0.22.36 Installed FFTW_jll ──────────────────── v3.3.11+0 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed FreeType2_jll ─────────────── v2.13.4+0 Installed FFTW ──────────────────────── v1.9.0 Installed IndirectArrays ────────────── v1.0.0 Installed GeoInterface ──────────────── v1.4.1 Installed Automa ────────────────────── v1.1.0 Installed Xorg_libXext_jll ──────────── v1.3.7+0 Installed MLJModelInterface ─────────── v1.12.0 Installed NLopt_jll ─────────────────── v2.10.0+0 Installed DelaunayTriangulation ─────── v1.6.4 Installing 56 artifacts Installed artifact Xorg_xtrans 48.2 KiB Installed artifact LERC 272.9 KiB Installed artifact Pixman 372.2 KiB Installed artifact isoband 25.7 KiB Installed artifact LLVMOpenMP 661.6 KiB Installed artifact NLopt 322.7 KiB Installed artifact x264 2.1 MiB Installed artifact FFTW 2.2 MiB Installed artifact Pango 1.1 MiB Installed artifact Arpack 147.2 KiB Installed artifact libvorbis 271.0 KiB Installed artifact LZO 208.9 KiB Installed artifact Libiconv 1.9 MiB Installed artifact libpng 328.4 KiB Installed artifact Opus 925.5 KiB Installed artifact libfdk_aac 2.8 MiB Installed artifact FriBidi 78.9 KiB Installed artifact JpegTurbo 1.6 MiB Installed artifact Libmount 6.4 MiB Installed artifact Xorg_libXext 699.9 KiB Installed artifact Cairo 2.2 MiB Installed artifact HarfBuzz 1.7 MiB Installed artifact Xorg_libxcb 2.1 MiB Installed artifact x265 1.4 MiB Installed artifact FreeType2 1.5 MiB Installed artifact Graphite2 120.2 KiB Installed artifact Imath 182.8 KiB Installed artifact Libtiff 3.2 MiB Installed artifact Giflib 154.6 KiB Installed artifact OpenBLASConsistentFPCSR 9.9 MiB Installed artifact LAME 292.5 KiB Installed artifact Fontconfig 522.5 KiB Installed artifact oneTBB 435.6 KiB Installed artifact GettextRuntime 543.0 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact Xorg_libXdmcp 67.7 KiB Installed artifact libaom 6.4 MiB Installed artifact OpenEXR 1.9 MiB Installed artifact Libffi 44.2 KiB Installed artifact Xorg_libXrender 435.9 KiB Installed artifact Expat 271.4 KiB Installed artifact CRlibm 169.5 KiB Installed artifact libsixel 177.3 KiB Installed artifact Bzip2 503.5 KiB Installed artifact Ogg 250.3 KiB Installed artifact libwebp 2.6 MiB Installed artifact EarCut 80.5 KiB Installed artifact libass 427.8 KiB Installed artifact Xorg_libXau 36.6 KiB Installed artifact FFMPEG 11.0 MiB Installed artifact XZ 1.5 MiB Installed artifact Rmath 121.9 KiB Installed artifact Xorg_libX11 13.9 MiB Installed artifact Glib 7.7 MiB Installed artifact Libglvnd 833.5 KiB Installed artifact Libuuid 3.5 MiB Updating `~/.julia/environments/v1.13/Project.toml` [2e4ec7c6] + PhyloClustering v0.2.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.3.0 [35492f91] + AdaptivePredicates v1.2.0 [66dad0bd] + AliasTables v1.1.3 [27a7e980] + Animations v0.4.2 [7d9fca2a] + Arpack v0.5.4 [67c07d97] + Automa v1.1.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.7 [18cc8868] + BaseDirs v1.3.2 [47718e42] + BioGenerics v0.1.5 [7e6ae17a] + BioSequences v3.5.0 [3c28c6f8] + BioSymbols v5.2.0 [fa961155] + CEnum v0.5.0 [96374032] + CRlibm v1.0.2 [336ed68f] + CSV v0.10.15 [159f3aea] + Cairo v1.1.1 ⌅ [13f3f980] + CairoMakie v0.11.11 [d360d2e6] + ChainRulesCore v1.25.2 [aaaa29a8] + Clustering v0.15.8 [944b1d66] + CodecZlib v0.7.8 [a2cac450] + ColorBrewer v0.4.1 [35d6a980] + ColorSchemes v3.30.0 ⌅ [3da002f7] + ColorTypes v0.11.5 ⌃ [c3611d14] + ColorVectorSpace v0.10.0 ⌅ [5ae59095] + Colors v0.12.11 [861a8166] + Combinatorics v1.0.3 [34da2185] + Compat v4.18.0 [187b0558] + ConstructionBase v1.6.0 [d38c429a] + Contour v0.6.3 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [927a84f5] + DelaunayTriangulation v1.6.4 [8bb1440f] + DelimitedFiles v1.9.1 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [429591f6] + ExactPredicates v2.2.8 [411431e0] + Extents v0.1.6 [c2308a5c] + FASTX v2.1.7 [7a1cc6ca] + FFTW v1.9.0 [5789e2e9] + FileIO v1.17.0 ⌅ [8fc22ac5] + FilePaths v0.8.3 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.13.0 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 [59287772] + Formatting v0.4.3 [b38be410] + FreeType v4.1.1 [663a7486] + FreeTypeAbstraction v0.10.8 ⌅ [d9f16b24] + Functors v0.4.12 [38e38edf] + GLM v1.9.0 [cc18c42c] + GaussianMixtures v0.3.13 [68eda718] + GeoFormatTypes v0.4.4 ⌃ [cf35fbd7] + GeoInterface v1.4.1 ⌅ [5c1252a2] + GeometryBasics v0.4.11 [a2bd30eb] + Graphics v1.1.3 ⌅ [3955a311] + GridLayoutBase v0.10.2 [42e2da0e] + Grisu v1.0.2 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [2803e5a7] + ImageAxes v0.6.12 [c817782e] + ImageBase v0.1.7 [a09fc81d] + ImageCore v0.10.5 [82e4d734] + ImageIO v0.6.9 [bc367c6b] + ImageMetadata v0.9.10 [9b13fd28] + IndirectArrays v1.0.0 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.4 [a98d9a8b] + Interpolations v0.16.1 ⌅ [d1acc4aa] + IntervalArithmetic v0.22.36 [8197267c] + IntervalSets v0.7.11 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [f1662d9f] + Isoband v0.1.1 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.5.15 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v0.21.4 [b835a17e] + JpegTurbo v0.1.6 [5ab0869b] + KernelDensity v0.6.10 [b964fa9f] + LaTeXStrings v1.4.0 [8cdb02fc] + LazyModules v0.3.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [e80e1ace] + MLJModelInterface v1.12.0 [1914dd2f] + MacroTools v0.5.16 ⌅ [ee78f7c6] + Makie v0.20.10 ⌅ [20f20a25] + MakieCore v0.7.3 [dbb5928d] + MappedArrays v0.4.2 ⌅ [0a4f8689] + MathTeXEngine v0.5.7 [e1d29d7a] + Missings v1.2.0 [e94cdb99] + MosaicViews v0.3.4 [6f286f6a] + MultivariateStats v0.10.3 [76087f3c] + NLopt v1.2.0 [77ba4419] + NaNMath v1.1.3 [b8a86587] + NearestNeighbors v0.4.22 [f09324ee] + Netpbm v1.1.1 [510215fc] + Observables v0.5.5 [6fe1bfb0] + OffsetArrays v1.17.0 [52e1d378] + OpenEXR v0.3.3 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [f57f5aa1] + PNGFiles v0.4.4 [19eb6ba3] + Packing v0.5.1 [5432bcbf] + PaddedViews v0.5.12 [42b8e9d4] + ParallelKMeans v1.1.0 [69de0a69] + Parsers v2.8.3 [2e4ec7c6] + PhyloClustering v0.2.0 ⌅ [33ad39ac] + PhyloNetworks v0.16.4 [eebad327] + PkgVersion v0.3.3 [995b91a9] + PlotUtils v1.4.3 [647866c9] + PolygonOps v0.1.2 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [4b34888f] + QOI v1.0.1 [1fd47b50] + QuadGK v2.11.2 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [189a3867] + Reexport v1.2.2 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [5eaf0fd0] + RoundingEmulator v0.2.1 [fdea26ae] + SIMD v3.7.1 [30f210dd] + ScientificTypesBase v3.0.0 [6e75b9c4] + ScikitLearnBase v0.5.0 [7e506255] + ScopedValues v1.4.0 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.8 ⌅ [65257c39] + ShaderAbstractions v0.4.1 [1277b4bf] + ShiftedArrays v2.0.0 [992d4aef] + Showoff v1.0.3 [73760f76] + SignedDistanceFields v0.4.0 [699a6c99] + SimpleTraits v0.9.4 [45858cf5] + Sixel v0.1.5 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.1 [860ef19b] + StableRNGs v1.0.3 [cae243ae] + StackViews v0.1.2 [90137ffa] + StaticArrays v1.9.14 [1e83bf80] + StaticArraysCore v1.4.3 [64bff920] + StatisticalTraits v3.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 ⌅ [2913bbd2] + StatsBase v0.33.21 [4c63d2b9] + StatsFuns v1.5.0 [3eaba693] + StatsModels v0.7.4 [892a3eda] + StringManipulation v0.4.1 [354b36f9] + StringViews v1.3.4 ⌅ [09ab397b] + StructArrays v0.6.21 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [731e570b] + TiffImages v0.11.4 [3bb67fe8] + TranscodingStreams v0.11.3 [981d1d27] + TriplotBase v0.1.0 [7200193e] + Twiddle v1.1.2 [1cfade01] + UnicodeFun v0.4.1 [c4a57d5a] + UnsafeArrays v1.0.8 [ea10d353] + WeakRefStrings v1.4.2 [e3aaa7dc] + WebP v0.1.3 [efce3f68] + WoodburyMatrices v1.0.0 [76eceee3] + WorkerUtilities v1.6.1 ⌅ [68821587] + Arpack_jll v3.5.1+1 [6e34b625] + Bzip2_jll v1.0.9+0 [4e9b3aee] + CRlibm_jll v1.0.1+0 [83423d85] + Cairo_jll v1.18.5+0 [5ae413db] + EarCut_jll v2.2.4+0 [2e619515] + Expat_jll v2.6.5+0 ⌅ [b22a6f82] + FFMPEG_jll v6.1.3+0 [f5851436] + FFTW_jll v3.3.11+0 [a3f928ae] + Fontconfig_jll v2.16.0+0 [d7e528f0] + FreeType2_jll v2.13.4+0 [559328eb] + FriBidi_jll v1.0.17+0 [b0724c58] + GettextRuntime_jll v0.22.4+0 [59f7168a] + Giflib_jll v5.2.3+0 [7746bdde] + Glib_jll v2.84.3+0 [3b182d85] + Graphite2_jll v1.3.15+0 [2e76f6c2] + HarfBuzz_jll v8.5.1+0 [905a6f67] + Imath_jll v3.1.11+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [aacddb02] + JpegTurbo_jll v3.1.1+0 [c1c5ebd0] + LAME_jll v3.100.3+0 [88015f11] + LERC_jll v4.0.1+0 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [dd4b983a] + LZO_jll v2.10.3+0 [e9f186c6] + Libffi_jll v3.4.7+0 [7e76a0d4] + Libglvnd_jll v1.7.1+1 [94ce4f54] + Libiconv_jll v1.18.0+0 [4b2f31a3] + Libmount_jll v2.41.0+0 [89763e89] + Libtiff_jll v4.7.1+0 [38a345b3] + Libuuid_jll v2.41.0+0 [856f044c] + MKL_jll v2025.2.0+0 [079eb43e] + NLopt_jll v2.10.0+0 [e7412a2a] + Ogg_jll v1.3.6+0 [6cdc7f73] + OpenBLASConsistentFPCSR_jll v0.3.29+0 [18a262bb] + OpenEXR_jll v3.2.4+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [91d4177d] + Opus_jll v1.5.2+0 [36c8627f] + Pango_jll v1.56.3+0 ⌅ [30392449] + Pixman_jll v0.44.2+0 [f50d1b31] + Rmath_jll v0.5.1+0 [ffd25f8a] + XZ_jll v5.8.1+0 [4f6342f7] + Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.7+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [9a68df92] + isoband_jll v0.2.3+0 [a4ae2306] + libaom_jll v3.12.1+0 [0ac62f75] + libass_jll v0.17.4+0 [f638f0a6] + libfdk_aac_jll v2.0.4+0 [b53b4c65] + libpng_jll v1.6.50+0 [075b6546] + libsixel_jll v1.10.5+0 [f27f6e37] + libvorbis_jll v1.3.8+0 [c5f90fcd] + libwebp_jll v1.6.0+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [1270edf5] + x264_jll v10164.0.1+0 [dfaa095f] + x265_jll v4.1.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [8bf52ea8] + CRC32c v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.7.15 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 33.27s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 1217.2 ms ✓ StringViews 931.3 ms ✓ MappedArrays 2827.5 ms ✓ AdaptivePredicates 1344.7 ms ✓ GeoFormatTypes 790.3 ms ✓ PolygonOps 960.8 ms ✓ StableRNGs 1093.2 ms ✓ DocStringExtensions 5152.6 ms ✓ BaseDirs 777.2 ms ✓ DataValueInterfaces 2020.8 ms ✓ IrrationalConstants 868.0 ms ✓ TensorCore 816.8 ms ✓ LaTeXStrings 976.7 ms ✓ Observables 1906.1 ms ✓ Combinatorics 1022.0 ms ✓ WorkerUtilities 1071.8 ms ✓ Requires 1027.7 ms ✓ ConstructionBase 931.3 ms ✓ TriplotBase 1103.4 ms ✓ Statistics 970.0 ms ✓ LazyModules 1017.4 ms ✓ Extents 3092.0 ms ✓ Functors 1096.3 ms ✓ AbstractTrees 798.6 ms ✓ RangeArrays 825.5 ms ✓ DataAPI 1628.1 ms ✓ InlineStrings 800.6 ms ✓ IndirectArrays 2267.1 ms ✓ Format 869.1 ms ✓ InvertedIndices 827.5 ms ✓ StatsAPI 1340.5 ms ✓ Grisu 881.8 ms ✓ Contour 4182.7 ms ✓ MacroTools 1177.5 ms ✓ OrderedCollections 712.5 ms ✓ IteratorInterfaceExtensions 1719.4 ms ✓ Crayons 828.0 ms ✓ CEnum 1577.2 ms ✓ OffsetArrays 850.2 ms ✓ EnumX 1804.0 ms ✓ FillArrays 862.2 ms ✓ ScientificTypesBase 824.6 ms ✓ Twiddle 945.1 ms ✓ DelimitedFiles 879.8 ms ✓ HashArrayMappedTries 867.1 ms ✓ ShiftedArrays 1191.0 ms ✓ TranscodingStreams 796.3 ms ✓ PtrArrays 1040.1 ms ✓ IntervalSets 984.3 ms ✓ Inflate 876.1 ms ✓ StaticArraysCore 762.0 ms ✓ Reexport 860.7 ms ✓ RoundingEmulator 1018.2 ms ✓ UnsafeArrays 1115.3 ms ✓ IterTools 1125.7 ms ✓ Formatting 1003.6 ms ✓ AbstractFFTs 1222.1 ms ✓ SuiteSparse 991.7 ms ✓ NaNMath 1402.0 ms ✓ WoodburyMatrices 1715.1 ms ✓ ProgressMeter 3691.7 ms ✓ SentinelArrays 971.0 ms ✓ Scratch 1055.6 ms ✓ Preferences 1101.1 ms ✓ Compat 3024.8 ms ✓ UnicodeFun 4335.8 ms ✓ PkgVersion 1286.7 ms ✓ LogExpFunctions 3095.6 ms ✓ MakieCore 838.1 ms ✓ Ratios 899.4 ms ✓ Adapt 9556.9 ms ✓ FileIO 798.6 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 813.9 ms ✓ SignedDistanceFields 1284.7 ms ✓ Statistics → SparseArraysExt 3569.9 ms ✓ FixedPointNumbers 974.8 ms ✓ ScikitLearnBase 941.1 ms ✓ Missings 1025.9 ms ✓ PooledArrays 2462.2 ms ✓ GeoInterface 1449.5 ms ✓ Distances 818.3 ms ✓ Showoff 3708.0 ms ✓ SimpleTraits 732.7 ms ✓ TableTraits 982.1 ms ✓ PaddedViews 841.2 ms ✓ StackViews 887.0 ms ✓ FillArrays → FillArraysStatisticsExt 1421.3 ms ✓ FillArrays → FillArraysSparseArraysExt 848.5 ms ✓ StatisticalTraits 844.4 ms ✓ ScopedValues 913.6 ms ✓ CodecZlib 946.6 ms ✓ BioGenerics 975.4 ms ✓ AliasTables 809.0 ms ✓ IntervalSets → IntervalSetsRandomExt 831.5 ms ✓ IntervalSets → IntervalSetsStatisticsExt 824.0 ms ✓ ConstructionBase → ConstructionBaseIntervalSetsExt 3638.4 ms ✓ AbstractFFTs → AbstractFFTsTestExt 1756.4 ms ✓ PDMats 1325.9 ms ✓ AxisAlgorithms 1075.3 ms ✓ RelocatableFolders 901.1 ms ✓ PrecompileTools 1120.7 ms ✓ JLLWrappers 883.5 ms ✓ Compat → CompatLinearAlgebraExt 1232.3 ms ✓ Adapt → AdaptSparseArraysExt 832.3 ms ✓ OffsetArrays → OffsetArraysAdaptExt 4478.9 ms ✓ ColorTypes 835.0 ms ✓ Ratios → RatiosFixedPointNumbersExt 1228.2 ms ✓ Distances → DistancesSparseArraysExt 1650.6 ms ✓ Tables 962.3 ms ✓ MosaicViews 3036.4 ms ✓ MLJModelInterface 1684.6 ms ✓ AxisArrays 1321.6 ms ✓ FillArrays → FillArraysPDMatsExt 2407.0 ms ✓ BioSymbols 3713.4 ms ✓ StringManipulation 16492.4 ms ✓ SIMD 12987.4 ms ✓ StaticArrays 16668.9 ms ✓ Parsers 45473.3 ms ✓ JLD2 1312.5 ms ✓ Opus_jll 1365.3 ms ✓ XZ_jll 1285.9 ms ✓ libpng_jll 1304.7 ms ✓ Libuuid_jll 1282.7 ms ✓ Xorg_libXau_jll 1323.5 ms ✓ OpenSpecFun_jll 1297.1 ms ✓ Rmath_jll 4633.5 ms ✓ IntelOpenMP_jll 1412.5 ms ✓ FriBidi_jll 1330.6 ms ✓ LLVMOpenMP_jll 1435.2 ms ✓ Expat_jll 1334.0 ms ✓ LAME_jll 1314.9 ms ✓ Graphite2_jll 1319.8 ms ✓ Ogg_jll 1160.6 ms ✓ Xorg_xtrans_jll 1378.8 ms ✓ JpegTurbo_jll 1338.7 ms ✓ oneTBB_jll 1340.4 ms ✓ Arpack_jll 1358.5 ms ✓ OpenBLASConsistentFPCSR_jll 1316.0 ms ✓ Giflib_jll 1289.0 ms ✓ NLopt_jll 1319.0 ms ✓ CRlibm_jll 1328.9 ms ✓ LERC_jll 1364.4 ms ✓ x264_jll 1358.5 ms ✓ Xorg_libXdmcp_jll 1348.7 ms ✓ LZO_jll 1337.4 ms ✓ Libiconv_jll 1333.0 ms ✓ EarCut_jll 1345.6 ms ✓ libaom_jll 1350.9 ms ✓ Libffi_jll 1334.0 ms ✓ isoband_jll 1338.8 ms ✓ FFTW_jll 1354.9 ms ✓ x265_jll 1333.4 ms ✓ Libmount_jll 1371.4 ms ✓ libfdk_aac_jll 1343.7 ms ✓ Bzip2_jll 1299.5 ms ✓ Imath_jll 2612.4 ms ✓ ChainRulesCore 2307.1 ms ✓ FilePathsBase 4099.0 ms ✓ DataStructures 6427.4 ms ✓ Colors 3406.2 ms ✓ ColorVectorSpace 5489.1 ms ✓ QOI 1638.8 ms ✓ StructArrays 9416.8 ms ✓ BioSequences 26132.8 ms ✓ PrettyTables 20750.1 ms ✓ Automa 1387.3 ms ✓ StaticArrays → StaticArraysStatisticsExt 1416.8 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1402.5 ms ✓ Adapt → AdaptStaticArraysExt 3703.9 ms ✓ JSON 980.7 ms ✓ InlineStrings → ParsersExt 4973.3 ms ✓ SpecialFunctions 1761.2 ms ✓ Rmath 1330.1 ms ✓ Pixman_jll 1565.9 ms ✓ libvorbis_jll 1548.4 ms ✓ libsixel_jll 11029.7 ms ✓ MKL_jll 1572.9 ms ✓ Arpack 2171.0 ms ✓ NLopt 1416.0 ms ✓ CRlibm 2347.5 ms ✓ Libtiff_jll 1536.7 ms ✓ Xorg_libxcb_jll 1560.8 ms ✓ GettextRuntime_jll 1077.4 ms ✓ Isoband 1503.4 ms ✓ FreeType2_jll 1580.1 ms ✓ OpenEXR_jll 1319.7 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 913.0 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 3033.4 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 870.8 ms ✓ Distances → DistancesChainRulesCoreExt 1413.7 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1443.1 ms ✓ FilePathsBase → FilePathsBaseMmapExt 3304.3 ms ✓ FilePathsBase → FilePathsBaseTestExt 1591.5 ms ✓ FilePaths 3006.4 ms ✓ QuadGK 1738.7 ms ✓ SortingAlgorithms 51576.8 ms ✓ TiffImages 1260.1 ms ✓ Animations 1234.6 ms ✓ Graphics 29333.0 ms ✓ ImageCore 8649.3 ms ✓ ColorSchemes 876.6 ms ✓ StructArrays → StructArraysAdaptExt 983.8 ms ✓ StructArrays → StructArraysLinearAlgebraExt 1624.3 ms ✓ StructArrays → StructArraysStaticArraysExt 1351.4 ms ✓ StructArrays → StructArraysSparseArraysExt 23700.7 ms ✓ FASTX 4362.2 ms ✓ NearestNeighbors 3587.1 ms ✓ ColorBrewer 3019.8 ms ✓ WeakRefStrings 4505.3 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2663.4 ms ✓ HypergeometricFunctions 1512.4 ms ✓ ColorVectorSpace → SpecialFunctionsExt 6871.3 ms ✓ FFTW 5509.2 ms ✓ IntervalArithmetic 1579.7 ms ✓ Xorg_libX11_jll 1639.3 ms ✓ Glib_jll 1986.2 ms ✓ FreeType 1671.3 ms ✓ Fontconfig_jll 5989.6 ms ✓ OpenEXR 5682.2 ms ✓ Interpolations 8455.8 ms ✓ StatsBase 85318.1 ms ✓ DataFrames 3851.8 ms ✓ ImageBase 6723.0 ms ✓ PNGFiles 10444.6 ms ✓ Sixel 9162.9 ms ✓ JpegTurbo 17296.5 ms ✓ PlotUtils 10552.5 ms ✓ GeometryBasics 1840.6 ms ✓ FASTX → BioSequencesExt 29901.1 ms ✓ CSV 3101.3 ms ✓ StatsFuns 1732.5 ms ✓ IntervalArithmetic → IntervalArithmeticSparseArraysExt 1204.2 ms ✓ IntervalArithmetic → IntervalArithmeticIntervalSetsExt 1689.8 ms ✓ IntervalArithmetic → IntervalArithmeticLinearAlgebraExt 1556.2 ms ✓ Xorg_libXrender_jll 1572.9 ms ✓ Xorg_libXext_jll 7399.6 ms ✓ ParallelKMeans 8587.7 ms ✓ Clustering 5554.2 ms ✓ ImageAxes 11253.3 ms ✓ GridLayoutBase 2967.1 ms ✓ Packing 3601.3 ms ✓ ShaderAbstractions 5350.6 ms ✓ FreeTypeAbstraction 3587.8 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 9329.4 ms ✓ StatsModels 14349.6 ms ✓ Distributions 7200.5 ms ✓ ExactPredicates 1571.6 ms ✓ Libglvnd_jll 1685.5 ms ✓ Cairo_jll 4203.2 ms ✓ ImageMetadata 26509.1 ms ✓ MathTeXEngine 6054.1 ms ✓ Distributions → DistributionsTestExt 5529.5 ms ✓ Distributions → DistributionsChainRulesCoreExt 8655.1 ms ✓ GLM 8027.5 ms ✓ MultivariateStats 12075.0 ms ✓ GaussianMixtures 10717.7 ms ✓ DelaunayTriangulation 1671.2 ms ✓ libwebp_jll 1636.5 ms ✓ HarfBuzz_jll 7366.1 ms ✓ Netpbm 6647.1 ms ✓ KernelDensity 23087.9 ms ✓ PhyloNetworks 8226.1 ms ✓ WebP 1647.0 ms ✓ libass_jll 1661.8 ms ✓ Pango_jll 5065.9 ms ✓ ImageIO 2061.3 ms ✓ FFMPEG_jll 2472.2 ms ✓ Cairo 170500.4 ms ✓ Makie ✗ CairoMakie ✗ PhyloClustering 268 dependencies successfully precompiled in 1413 seconds. 41 already precompiled. 2 dependencies had output during precompilation: ┌ MKL_jll │ Downloading artifact: IntelOpenMP └ ┌ Formatting │ ┌ Warning: DEPRECATION NOTICE │ │ │ │ Formatting.jl has been unmaintained for a while, with some serious │ │ correctness bugs compromising the original purpose of the package. As a result, │ │ it has been deprecated - consider using an alternative, such as │ │ `Format.jl` (https://github.com/JuliaString/Format.jl) or the `Printf` stdlib directly. │ │ │ │ If you are not using Formatting.jl as a direct dependency, please consider │ │ opening an issue on any packages you are using that do use it as a dependency. │ │ From Julia 1.9 onwards, you can query `]why Formatting` to figure out which │ │ package originally brings it in as a dependency. │ └ @ Formatting ~/.julia/packages/Formatting/3VxOt/src/Formatting.jl:12 └ ERROR: LoadError: The following 1 direct dependency failed to precompile: PhyloClustering Failed to precompile PhyloClustering [2e4ec7c6-185f-4bfd-8419-ce336ea983f6] to "/home/pkgeval/.julia/compiled/v1.13/PhyloClustering/jl_JHJfSM" (ProcessExited(1)). ERROR: LoadError: FieldError: type Core.TypeName has no field `mt`, available fields: `name`, `module`, `singletonname`, `names`, `atomicfields`, `constfields`, `wrapper`, `Typeofwrapper`, `cache`, `linearcache`, `partial`, `hash`, `max_args`, `n_uninitialized`, `flags`, `cache_entry_count`, `max_methods`, `constprop_heuristic` Stacktrace: [1] getproperty(x::Core.TypeName, f::Symbol) @ Base ./Base_compiler.jl:57 [2] func2string(func::typeof(MakieCore.linesegments)) @ MakieCore ~/.julia/packages/MakieCore/UAwps/src/recipes.jl:9 [3] plotkey(::Type{MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}}) @ MakieCore ~/.julia/packages/MakieCore/UAwps/src/recipes.jl:21 [4] plotkey(::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}) @ MakieCore ~/.julia/packages/MakieCore/UAwps/src/recipes.jl:22 [5] get_attribute(dict::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}, key::Symbol, default::Nothing) @ MakieCore ~/.julia/packages/MakieCore/UAwps/src/attributes.jl:255 [6] get_attribute(dict::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}, key::Symbol) @ MakieCore ~/.julia/packages/MakieCore/UAwps/src/attributes.jl:252 [7] draw_atomic(scene::Makie.Scene, screen::CairoMakie.Screen{CairoMakie.IMAGE}, primitive::Union{MakieCore.Lines, MakieCore.LineSegments}) @ CairoMakie ~/.julia/packages/CairoMakie/0QLG6/src/primitives.jl:6 [8] draw_plot(scene::Makie.Scene, screen::CairoMakie.Screen{CairoMakie.IMAGE}, primitive::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}) @ CairoMakie ~/.julia/packages/CairoMakie/0QLG6/src/infrastructure.jl:129 [9] cairo_draw(screen::CairoMakie.Screen{CairoMakie.IMAGE}, scene::Makie.Scene) @ CairoMakie ~/.julia/packages/CairoMakie/0QLG6/src/infrastructure.jl:51 [10] colorbuffer(screen::CairoMakie.Screen{CairoMakie.IMAGE}) @ CairoMakie ~/.julia/packages/CairoMakie/0QLG6/src/screen.jl:311 [11] colorbuffer(screen::CairoMakie.Screen{CairoMakie.IMAGE}, format::Makie.ImageStorageFormat) @ Makie ~/.julia/packages/Makie/iRM0c/src/display.jl:382 [12] colorbuffer(fig::Makie.FigureAxisPlot, format::Makie.ImageStorageFormat; update::Bool, backend::Module, screen_config::@Kwargs{}) @ Makie ~/.julia/packages/Makie/iRM0c/src/display.jl:466 [13] colorbuffer @ ~/.julia/packages/Makie/iRM0c/src/display.jl:457 [inlined] [14] colorbuffer(fig::Makie.FigureAxisPlot) @ Makie ~/.julia/packages/Makie/iRM0c/src/display.jl:457 [15] top-level scope @ ~/.julia/packages/Makie/iRM0c/precompile/shared-precompile.jl:6 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [17] top-level scope @ ~/.julia/packages/CairoMakie/0QLG6/src/precompiles.jl:11 [18] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [19] macro expansion @ ~/.julia/packages/CairoMakie/0QLG6/src/precompiles.jl:15 [inlined] [20] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [21] top-level scope @ ~/.julia/packages/CairoMakie/0QLG6/src/CairoMakie.jl:36 [22] include(mod::Module, _path::String) @ Base ./Base.jl:311 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3002 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [27] include_string @ ./loading.jl:2858 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [29] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/Makie/iRM0c/precompile/shared-precompile.jl:4 in expression starting at /home/pkgeval/.julia/packages/CairoMakie/0QLG6/src/precompiles.jl:10 in expression starting at /home/pkgeval/.julia/packages/CairoMakie/0QLG6/src/CairoMakie.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile CairoMakie [13f3f980-e62b-5c42-98c6-ff1f3baf88f0] to "/home/pkgeval/.julia/compiled/v1.13/CairoMakie/jl_cUdEmv" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3289 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2654 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#235 @ ./reflection.jl:1333 [inlined] [8] invokelatest_gr @ ./reflection.jl:1325 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3860 [10] maybe_cachefile_lock @ ./loading.jl:3857 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2640 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2468 [13] macro expansion @ ./loading.jl:2396 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2360 [16] require @ ./loading.jl:2336 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/PhyloClustering/7nfrG/src/helper.jl:1 [21] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [22] top-level scope @ ~/.julia/packages/PhyloClustering/7nfrG/src/PhyloClustering.jl:5 [23] include(mod::Module, _path::String) @ Base ./Base.jl:311 [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3002 [25] top-level scope @ stdin:5 [26] eval(m::Module, e::Any) @ Core ./boot.jl:489 [27] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [28] include_string @ ./loading.jl:2858 [inlined] [29] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [30] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/PhyloClustering/7nfrG/src/helper.jl:1 in expression starting at /home/pkgeval/.julia/packages/PhyloClustering/7nfrG/src/PhyloClustering.jl:3 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 1414.61s ################################################################################ # Loading # Loading PhyloClustering... Precompiling packages... ✗ CairoMakie Info Given PhyloClustering was explicitly requested, output will be shown live  ERROR: LoadError: FieldError: type Core.TypeName has no field `mt`, available fields: `name`, `module`, `singletonname`, `names`, `atomicfields`, `constfields`, `wrapper`, `Typeofwrapper`, `cache`, `linearcache`, `partial`, `hash`, `max_args`, `n_uninitialized`, `flags`, `cache_entry_count`, `max_methods`, `constprop_heuristic` Stacktrace:  [1] getproperty(x::Core.TypeName, f::Symbol)  @ Base ./Base_compiler.jl:57  [2] func2string(func::typeof(MakieCore.linesegments))  @ MakieCore ~/.julia/packages/MakieCore/UAwps/src/recipes.jl:9  [3] plotkey(::Type{MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}})  @ MakieCore ~/.julia/packages/MakieCore/UAwps/src/recipes.jl:21  [4] plotkey(::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}})  @ MakieCore ~/.julia/packages/MakieCore/UAwps/src/recipes.jl:22  [5] get_attribute(dict::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}, key::Symbol, default::Nothing)  @ MakieCore ~/.julia/packages/MakieCore/UAwps/src/attributes.jl:255  [6] get_attribute(dict::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}, key::Symbol)  @ MakieCore ~/.julia/packages/MakieCore/UAwps/src/attributes.jl:252  [7] draw_atomic(scene::Makie.Scene, screen::CairoMakie.Screen{CairoMakie.IMAGE}, primitive::Union{MakieCore.Lines, MakieCore.LineSegments})  @ CairoMakie ~/.julia/packages/CairoMakie/0QLG6/src/primitives.jl:6  [8] draw_plot(scene::Makie.Scene, screen::CairoMakie.Screen{CairoMakie.IMAGE}, primitive::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}})  @ CairoMakie ~/.julia/packages/CairoMakie/0QLG6/src/infrastructure.jl:129  [9] cairo_draw(screen::CairoMakie.Screen{CairoMakie.IMAGE}, scene::Makie.Scene)  @ CairoMakie ~/.julia/packages/CairoMakie/0QLG6/src/infrastructure.jl:51  [10] colorbuffer(screen::CairoMakie.Screen{CairoMakie.IMAGE})  @ CairoMakie ~/.julia/packages/CairoMakie/0QLG6/src/screen.jl:311  [11] colorbuffer(screen::CairoMakie.Screen{CairoMakie.IMAGE}, format::Makie.ImageStorageFormat)  @ Makie ~/.julia/packages/Makie/iRM0c/src/display.jl:382  [12] colorbuffer(fig::Makie.FigureAxisPlot, format::Makie.ImageStorageFormat; update::Bool, backend::Module, screen_config::@Kwargs{})  @ Makie ~/.julia/packages/Makie/iRM0c/src/display.jl:466  [13] colorbuffer  @ ~/.julia/packages/Makie/iRM0c/src/display.jl:457 [inlined]  [14] colorbuffer(fig::Makie.FigureAxisPlot)  @ Makie ~/.julia/packages/Makie/iRM0c/src/display.jl:457  [15] top-level scope  @ ~/.julia/packages/Makie/iRM0c/precompile/shared-precompile.jl:6  [16] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:312  [17] top-level scope  @ ~/.julia/packages/CairoMakie/0QLG6/src/precompiles.jl:11  [18] macro expansion  @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]  [19] macro expansion  @ ~/.julia/packages/CairoMakie/0QLG6/src/precompiles.jl:15 [inlined]  [20] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:312  [21] top-level scope  @ ~/.julia/packages/CairoMakie/0QLG6/src/CairoMakie.jl:36  [22] include(mod::Module, _path::String)  @ Base ./Base.jl:311  [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:3002  [24] top-level scope  @ stdin:5  [25] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2848  [27] include_string  @ ./loading.jl:2858 [inlined]  [28] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:318  [29] _start()  @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/Makie/iRM0c/precompile/shared-precompile.jl:4 in expression starting at /home/pkgeval/.julia/packages/CairoMakie/0QLG6/src/precompiles.jl:10 in expression starting at /home/pkgeval/.julia/packages/CairoMakie/0QLG6/src/CairoMakie.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile CairoMakie [13f3f980-e62b-5c42-98c6-ff1f3baf88f0] to "/home/pkgeval/.julia/compiled/v1.13/CairoMakie/jl_YW48BS" (ProcessExited(1)). Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3289  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()  @ Base ./loading.jl:2654  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94  [5] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115  [7] #invokelatest_gr#235  @ ./reflection.jl:1333 [inlined]  [8] invokelatest_gr  @ ./reflection.jl:1325 [inlined]  [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3860  [10] maybe_cachefile_lock  @ ./loading.jl:3857 [inlined]  [11] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2640  [12] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2468  [13] macro expansion  @ ./loading.jl:2396 [inlined]  [14] macro expansion  @ ./lock.jl:376 [inlined]  [15] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2360  [16] require  @ ./loading.jl:2336 [inlined]  [17] eval_import_path  @ ./module.jl:36 [inlined]  [18] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [19] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [20] top-level scope  @ ~/.julia/packages/PhyloClustering/7nfrG/src/helper.jl:1  [21] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:312  [22] top-level scope  @ ~/.julia/packages/PhyloClustering/7nfrG/src/PhyloClustering.jl:5  [23] include(mod::Module, _path::String)  @ Base ./Base.jl:311  [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3002  [25] top-level scope  @ stdin:5  [26] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [27] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2848  [28] include_string  @ ./loading.jl:2858 [inlined]  [29] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:318  [30] _start()  @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/PhyloClustering/7nfrG/src/helper.jl:1 in expression starting at /home/pkgeval/.julia/packages/PhyloClustering/7nfrG/src/PhyloClustering.jl:3 in expression starting at stdin:5 ✗ PhyloClustering 0 dependencies successfully precompiled in 183 seconds. 309 already precompiled. ERROR: The following 1 direct dependency failed to precompile: PhyloClustering Failed to precompile PhyloClustering [2e4ec7c6-185f-4bfd-8419-ce336ea983f6] to "/home/pkgeval/.julia/compiled/v1.13/PhyloClustering/jl_M0vMPp" (ProcessExited(1)). ERROR: LoadError: FieldError: type Core.TypeName has no field `mt`, available fields: `name`, `module`, `singletonname`, `names`, `atomicfields`, `constfields`, `wrapper`, `Typeofwrapper`, `cache`, `linearcache`, `partial`, `hash`, `max_args`, `n_uninitialized`, `flags`, `cache_entry_count`, `max_methods`, `constprop_heuristic` Stacktrace: [1] getproperty(x::Core.TypeName, f::Symbol) @ Base ./Base_compiler.jl:57 [2] func2string(func::typeof(MakieCore.linesegments)) @ MakieCore ~/.julia/packages/MakieCore/UAwps/src/recipes.jl:9 [3] plotkey(::Type{MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}}) @ MakieCore ~/.julia/packages/MakieCore/UAwps/src/recipes.jl:21 [4] plotkey(::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}) @ MakieCore ~/.julia/packages/MakieCore/UAwps/src/recipes.jl:22 [5] get_attribute(dict::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}, key::Symbol, default::Nothing) @ MakieCore ~/.julia/packages/MakieCore/UAwps/src/attributes.jl:255 [6] get_attribute(dict::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}, key::Symbol) @ MakieCore ~/.julia/packages/MakieCore/UAwps/src/attributes.jl:252 [7] draw_atomic(scene::Makie.Scene, screen::CairoMakie.Screen{CairoMakie.IMAGE}, primitive::Union{MakieCore.Lines, MakieCore.LineSegments}) @ CairoMakie ~/.julia/packages/CairoMakie/0QLG6/src/primitives.jl:6 [8] draw_plot(scene::Makie.Scene, screen::CairoMakie.Screen{CairoMakie.IMAGE}, primitive::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}) @ CairoMakie ~/.julia/packages/CairoMakie/0QLG6/src/infrastructure.jl:129 [9] cairo_draw(screen::CairoMakie.Screen{CairoMakie.IMAGE}, scene::Makie.Scene) @ CairoMakie ~/.julia/packages/CairoMakie/0QLG6/src/infrastructure.jl:51 [10] colorbuffer(screen::CairoMakie.Screen{CairoMakie.IMAGE}) @ CairoMakie ~/.julia/packages/CairoMakie/0QLG6/src/screen.jl:311 [11] colorbuffer(screen::CairoMakie.Screen{CairoMakie.IMAGE}, format::Makie.ImageStorageFormat) @ Makie ~/.julia/packages/Makie/iRM0c/src/display.jl:382 [12] colorbuffer(fig::Makie.FigureAxisPlot, format::Makie.ImageStorageFormat; update::Bool, backend::Module, screen_config::@Kwargs{}) @ Makie ~/.julia/packages/Makie/iRM0c/src/display.jl:466 [13] colorbuffer @ ~/.julia/packages/Makie/iRM0c/src/display.jl:457 [inlined] [14] colorbuffer(fig::Makie.FigureAxisPlot) @ Makie ~/.julia/packages/Makie/iRM0c/src/display.jl:457 [15] top-level scope @ ~/.julia/packages/Makie/iRM0c/precompile/shared-precompile.jl:6 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [17] top-level scope @ ~/.julia/packages/CairoMakie/0QLG6/src/precompiles.jl:11 [18] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [19] macro expansion @ ~/.julia/packages/CairoMakie/0QLG6/src/precompiles.jl:15 [inlined] [20] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [21] top-level scope @ ~/.julia/packages/CairoMakie/0QLG6/src/CairoMakie.jl:36 [22] include(mod::Module, _path::String) @ Base ./Base.jl:311 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3002 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [27] include_string @ ./loading.jl:2858 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [29] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/Makie/iRM0c/precompile/shared-precompile.jl:4 in expression starting at /home/pkgeval/.julia/packages/CairoMakie/0QLG6/src/precompiles.jl:10 in expression starting at /home/pkgeval/.julia/packages/CairoMakie/0QLG6/src/CairoMakie.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile CairoMakie [13f3f980-e62b-5c42-98c6-ff1f3baf88f0] to "/home/pkgeval/.julia/compiled/v1.13/CairoMakie/jl_YW48BS" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3289 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2654 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#235 @ ./reflection.jl:1333 [inlined] [8] invokelatest_gr @ ./reflection.jl:1325 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3860 [10] maybe_cachefile_lock @ ./loading.jl:3857 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2640 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2468 [13] macro expansion @ ./loading.jl:2396 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2360 [16] require @ ./loading.jl:2336 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/PhyloClustering/7nfrG/src/helper.jl:1 [21] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [22] top-level scope @ ~/.julia/packages/PhyloClustering/7nfrG/src/PhyloClustering.jl:5 [23] include(mod::Module, _path::String) @ Base ./Base.jl:311 [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3002 [25] top-level scope @ stdin:5 [26] eval(m::Module, e::Any) @ Core ./boot.jl:489 [27] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [28] include_string @ ./loading.jl:2858 [inlined] [29] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [30] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/PhyloClustering/7nfrG/src/helper.jl:1 in expression starting at /home/pkgeval/.julia/packages/PhyloClustering/7nfrG/src/PhyloClustering.jl:3 in expression starting at stdin: Loading failed after 185.38s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using PhyloClustering'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:602 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:517 [3] run(::Cmd) @ Base ./process.jl:514 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:311 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:320 [7] _start() @ Base ./client.jl:553 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 1667.77s: package fails to precompile