Package evaluation of GeometricIntegrators on Julia 1.13.0-DEV.923 (d2bbd0af86*) started at 2025-07-30T18:11:09.182 ################################################################################ # Set-up # Set-up completed after 0.28s ################################################################################ # Installation # Installing GeometricIntegrators... Resolving package versions... Installed FastTransforms ─ v0.17.0 Updating `~/.julia/environments/v1.13/Project.toml` [dcce2d33] + GeometricIntegrators v0.14.11 Updating `~/.julia/environments/v1.13/Manifest.toml` [a4c015fc] + ANSIColoredPrinters v0.0.1 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [4c555306] + ArrayLayouts v1.11.2 [aae01518] + BandedMatrices v1.9.4 [0e736298] + Bessels v0.2.8 [8e7c35d0] + BlockArrays v1.7.0 [944b1d66] + CodecZlib v0.7.8 [bbf7d656] + CommonSubexpressions v0.3.1 [a09551c4] + CompactBasisFunctions v0.2.14 [b152e2b5] + CompositeTypes v0.1.4 [187b0558] + ConstructionBase v1.6.0 [7ae1f121] + ContinuumArrays v0.19.3 [a8cc5b0e] + Crayons v4.1.1 [717857b8] + DSP v0.8.4 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.5 [e30172f5] + Documenter v1.14.1 [5b8099bc] + DomainSets v0.7.16 [7a1cc6ca] + FFTW v1.9.0 [442a2c76] + FastGaussQuadrature v1.0.2 [057dd010] + FastTransforms v0.17.0 [1a297f60] + FillArrays v1.13.0 [f6369f11] + ForwardDiff v1.0.1 [a8297547] + GenericFFT v0.1.6 [14197337] + GenericLinearAlgebra v0.3.18 ⌅ [9a0b12b7] + GeometricBase v0.11.2 ⌅ [c85262ba] + GeometricEquations v0.19.1 [dcce2d33] + GeometricIntegrators v0.14.11 ⌃ [7843afe4] + GeometricSolutions v0.5.1 [d7ba0133] + Git v1.4.0 [b5f81e59] + IOCapture v0.2.5 [4858937d] + InfiniteArrays v0.15.6 [e1ba4f0e] + Infinities v0.1.11 [8197267c] + IntervalSets v0.7.11 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [0e77f7df] + LazilyInitializedFields v1.3.0 [5078a376] + LazyArrays v2.6.2 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [d0879d2d] + MarkdownAST v0.1.2 [77ba4419] + NaNMath v1.1.3 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [f27b6e38] + Polynomials v4.1.0 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [92933f4c] + ProgressMeter v1.10.4 [a08977f5] + QuadratureRules v0.1.6 [c4ea9172] + QuasiArrays v0.12.0 [3cdcf5f2] + RecipesBase v1.3.4 [807425ed] + RecurrenceRelationships v0.2.0 [189a3867] + Reexport v1.2.2 [2792f1a3] + RegistryInstances v0.1.0 [ae029012] + Requires v1.3.1 [fb486d5c] + RungeKutta v0.5.17 [efcf1570] + Setfield v1.1.2 [36b790f5] + SimpleSolvers v0.5.4 [276daf66] + SpecialFunctions v2.5.1 [90137ffa] + StaticArrays v1.9.14 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [c751599d] + ToeplitzMatrices v0.8.5 [3bb67fe8] + TranscodingStreams v0.11.3 [3a884ed6] + UnPack v1.0.2 [2e619515] + 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Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building FastTransforms → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b41969ccec1379b33967c9b720a250d4687cfc2d/build.log` Installation completed after 12.56s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 2062.7 ms ✓ GeometricBase 3653.6 ms ✓ GeometricEquations 6664.1 ms ✓ SimpleSolvers 81756.8 ms ? RungeKutta 1871.1 ms ✓ GeometricSolutions 81133.0 ms ? GeometricIntegrators 4 dependencies successfully precompiled in 178 seconds. 159 already precompiled. 2 dependencies failed but may be precompilable after restarting julia 3 dependencies had output during precompilation: ┌ SimpleSolvers │ WARNING: Detected access to binding `SimpleSolvers.DEFAULT_BIERLAIRE_ξ` in a world prior to its definition world. │ Julia 1.12 has introduced more strict world age semantics for global bindings. │ !!! This code may malfunction under Revise. │ !!! This code will error in future versions of Julia. │ Hint: Add an appropriate `invokelatest` around the access to this binding. │ To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. └ ┌ RungeKutta │ WARNING: Constructor for type "AbstractVector" was extended in `QuasiArrays` without explicit qualification or import. │ NOTE: Assumed "AbstractVector" refers to `Base.AbstractVector`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function AbstractVector end`. │ Hint: To silence the warning, qualify `AbstractVector` as `Base.AbstractVector` in the method signature or explicitly `import Base: AbstractVector`. │ WARNING: Constructor for type "AbstractArray" was extended in `QuasiArrays` without explicit qualification or import. │ NOTE: Assumed "AbstractArray" refers to `Base.AbstractArray`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function AbstractArray end`. │ Hint: To silence the warning, qualify `AbstractArray` as `Base.AbstractArray` in the method signature or explicitly `import Base: AbstractArray`. │ WARNING: Constructor for type "AbstractMatrix" was extended in `QuasiArrays` without explicit qualification or import. │ NOTE: Assumed "AbstractMatrix" refers to `Base.AbstractMatrix`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function AbstractMatrix end`. │ Hint: To silence the warning, qualify `AbstractMatrix` as `Base.AbstractMatrix` in the method signature or explicitly `import Base: AbstractMatrix`. │ WARNING: Constructor for type "Tuple" was extended in `QuasiIteratorsMD` without explicit qualification or import. │ NOTE: Assumed "Tuple" refers to `Base.Tuple`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Tuple end`. │ Hint: To silence the warning, qualify `Tuple` as `Base.Tuple` in the method signature or explicitly `import Base: Tuple`. │ WARNING: Method definition convert(Type{SparseArrays.AbstractSparseArray{Tv, Ti, N}}, FillArrays.Zeros{T, N, Axes} where Axes) where {T, Tv, Ti, N} in module FillArraysSparseArraysExt at /home/pkgeval/.julia/packages/FillArrays/lVl4c/ext/FillArraysSparseArraysExt.jl:31 overwritten in module FillArraysSparseArraysExt on the same line (check for duplicate calls to `include`). │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ GeometricIntegrators │ WARNING: Constructor for type "AbstractVector" was extended in `QuasiArrays` without explicit qualification or import. │ NOTE: Assumed "AbstractVector" refers to `Base.AbstractVector`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function AbstractVector end`. │ Hint: To silence the warning, qualify `AbstractVector` as `Base.AbstractVector` in the method signature or explicitly `import Base: AbstractVector`. │ WARNING: Constructor for type "AbstractArray" was extended in `QuasiArrays` without explicit qualification or import. │ NOTE: Assumed "AbstractArray" refers to `Base.AbstractArray`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function AbstractArray end`. │ Hint: To silence the warning, qualify `AbstractArray` as `Base.AbstractArray` in the method signature or explicitly `import Base: AbstractArray`. │ WARNING: Constructor for type "AbstractMatrix" was extended in `QuasiArrays` without explicit qualification or import. │ NOTE: Assumed "AbstractMatrix" refers to `Base.AbstractMatrix`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function AbstractMatrix end`. │ Hint: To silence the warning, qualify `AbstractMatrix` as `Base.AbstractMatrix` in the method signature or explicitly `import Base: AbstractMatrix`. │ WARNING: Constructor for type "Tuple" was extended in `QuasiIteratorsMD` without explicit qualification or import. │ NOTE: Assumed "Tuple" refers to `Base.Tuple`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Tuple end`. │ Hint: To silence the warning, qualify `Tuple` as `Base.Tuple` in the method signature or explicitly `import Base: Tuple`. │ WARNING: Method definition convert(Type{SparseArrays.AbstractSparseArray{Tv, Ti, N}}, FillArrays.Zeros{T, N, Axes} where Axes) where {T, Tv, Ti, N} in module FillArraysSparseArraysExt at /home/pkgeval/.julia/packages/FillArrays/lVl4c/ext/FillArraysSparseArraysExt.jl:31 overwritten in module FillArraysSparseArraysExt on the same line (check for duplicate calls to `include`). │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ Precompilation completed after 183.34s ################################################################################ # Loading # Loading GeometricIntegrators... Precompiling packages... 56549.9 ms ? RungeKutta Info Given GeometricIntegrators was explicitly requested, output will be shown live  WARNING: Detected access to binding `SimpleSolvers.DEFAULT_BIERLAIRE_ξ` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. 93313.4 ms ✓ GeometricIntegrators 1 dependency successfully precompiled in 152 seconds. 163 already precompiled. 1 dependencies failed but may be precompilable after restarting julia 2 dependencies had output during precompilation: ┌ RungeKutta │ WARNING: Method definition cov(FillArrays.AbstractFill{T, 2, Axes} where Axes) where {T<:Number} in module FillArraysStatisticsExt at /home/pkgeval/.julia/packages/FillArrays/lVl4c/ext/FillArraysStatisticsExt.jl:23 overwritten in module FillArraysStatisticsExt on the same line (check for duplicate calls to `include`). │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ GeometricIntegrators │ [Output was shown above] └ Loading completed after 173.73s PkgEval succeeded after 387.98s