Package evaluation of DJUICE on Julia 1.13.0-DEV.923 (d2bbd0af86*) started at 2025-07-31T00:01:02.265 ################################################################################ # Set-up # Set-up completed after 0.24s ################################################################################ # Installation # Installing DJUICE... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [1cb5fe60] + DJUICE v0.1.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.16.0 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [35492f91] + AdaptivePredicates v1.2.0 [66dad0bd] + AliasTables v1.1.3 [27a7e980] + Animations v0.4.2 [dce04be8] + ArgCheck v2.5.0 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.19.0 [a9b6321e] + Atomix v1.1.1 [67c07d97] + Automa v1.1.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.7 [198e06fe] + BangBang v0.4.4 [18cc8868] + BaseDirs v1.3.2 [9718e550] + Baselet v0.1.1 [e2ed5e7c] + Bijections v0.2.2 [e1450e63] + BufferedStreams v1.2.2 [fa961155] + CEnum v0.5.0 [96374032] + CRlibm v1.0.2 [082447d4] + ChainRules v1.72.5 [d360d2e6] + ChainRulesCore v1.25.2 [944b1d66] + CodecZlib v0.7.8 [a2cac450] + ColorBrewer v0.4.1 [35d6a980] + ColorSchemes v3.30.0 ⌅ [3da002f7] + ColorTypes v0.11.5 ⌃ [c3611d14] + ColorVectorSpace v0.10.0 ⌅ [5ae59095] + Colors v0.12.11 [861a8166] + Combinatorics v1.0.3 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.0 [b152e2b5] + CompositeTypes v0.1.4 [a33af91c] + CompositionsBase v0.1.2 [88cd18e8] + ConsoleProgressMonitor v0.1.2 [187b0558] + ConstructionBase v1.6.0 [6add18c4] + ContextVariablesX v0.1.3 [d38c429a] + Contour v0.6.3 [a8cc5b0e] + Crayons v4.1.1 [1cb5fe60] + DJUICE v0.1.1 ⌅ [717857b8] + DSP v0.7.10 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [927a84f5] + DelaunayTriangulation v1.6.4 [8bb1440f] + DelimitedFiles v1.9.1 [85a47980] + Dictionaries v0.4.5 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [5b8099bc] + DomainSets v0.7.16 [7c1d4256] + DynamicPolynomials v0.6.2 [b7d42ee7] + Einsum v0.4.1 [4e289a0a] + EnumX v1.0.5 ⌅ [7da242da] + Enzyme v0.12.36 ⌅ [f151be2c] + EnzymeCore v0.7.8 [429591f6] + ExactPredicates v2.2.8 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [411431e0] + Extents v0.1.6 [7a1cc6ca] + FFTW v1.9.0 [cc61a311] + FLoops v0.2.2 [b9860ae5] + FLoopsBase v0.1.1 [5789e2e9] + FileIO v1.17.0 ⌅ [8fc22ac5] + FilePaths v0.8.3 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [53c48c17] + FixedPointNumbers v0.8.5 ⌅ [587475ba] + Flux v0.14.25 [1fa38f19] + Format v1.3.7 ⌅ [f6369f11] + ForwardDiff v0.10.38 [b38be410] + FreeType v4.1.1 [663a7486] + FreeTypeAbstraction v0.10.8 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 ⌅ [d9f16b24] + Functors v0.4.12 [f7f18e0c] + GLFW v3.4.4 ⌅ [e9467ef8] + GLMakie v0.9.11 [0c68f7d7] + GPUArrays v11.2.3 [46192b85] + GPUArraysCore v0.2.0 ⌅ [61eb1bfa] + GPUCompiler v0.27.5 [68eda718] + GeoFormatTypes v0.4.4 ⌃ [cf35fbd7] + GeoInterface v1.4.1 ⌅ [5c1252a2] + GeometryBasics v0.4.11 [86223c79] + Graphs v1.13.0 ⌅ [3955a311] + GridLayoutBase v0.10.2 [42e2da0e] + Grisu v1.0.2 [f67ccb44] + HDF5 v0.17.2 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [7869d1d1] + IRTools v0.4.15 [615f187c] + IfElse v0.1.1 [2803e5a7] + ImageAxes v0.6.12 [c817782e] + ImageBase v0.1.7 [a09fc81d] + ImageCore v0.10.5 [82e4d734] + ImageIO v0.6.9 [bc367c6b] + ImageMetadata v0.9.10 [313cdc1a] + Indexing v1.1.1 [9b13fd28] + IndirectArrays v1.0.0 [d25df0c9] + Inflate v0.1.5 [22cec73e] + InitialValues v0.3.1 [18e54dd8] + IntegerMathUtils v0.1.3 [a98d9a8b] + Interpolations v0.16.1 ⌅ [d1acc4aa] + IntervalArithmetic v0.22.36 [8197267c] + IntervalSets v0.7.11 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [f1662d9f] + Isoband v0.1.1 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v0.21.4 [ae98c720] + Jieko v0.2.1 [b835a17e] + JpegTurbo v0.1.6 [b14d175d] + JuliaVariables v0.2.4 [63c18a36] + KernelAbstractions v0.9.38 [5ab0869b] + KernelDensity v0.6.10 [2c470bb0] + Kronecker v0.5.5 [5be7bae1] + LBFGSB v0.4.1 ⌅ [929cbde3] + LLVM v9.0.0 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.8 [8cdb02fc] + LazyModules v0.3.1 [1d6d02ad] + LeftChildRightSiblingTrees v0.2.1 [d3d80556] + LineSearches v7.4.0 [7a12625a] + LinearMaps v3.11.4 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 [23992714] + MAT v0.10.7 [c2834f40] + MLCore v1.0.0 ⌃ [7e8f7934] + MLDataDevices v1.5.3 [d8e11817] + MLStyle v0.4.17 [f1d291b0] + MLUtils v0.4.8 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 ⌅ [ee78f7c6] + Makie v0.20.10 ⌅ [20f20a25] + MakieCore v0.7.3 ⌅ [af67fdf4] + ManifoldDiff v0.3.13 ⌃ [1cead3c2] + Manifolds v0.10.7 ⌅ [3362f125] + ManifoldsBase v0.15.24 [dbb5928d] + MappedArrays v0.4.2 ⌅ [0a4f8689] 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v0.5.12 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [eebad327] + PkgVersion v0.3.3 [995b91a9] + PlotUtils v1.4.3 [647866c9] + PolygonOps v0.1.2 ⌃ [f27b6e38] + Polynomials v4.0.21 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [8162dcfd] + PrettyPrint v0.2.0 [08abe8d2] + PrettyTables v2.4.0 [27ebfcd6] + Primes v0.5.7 [33c8b6b6] + ProgressLogging v0.1.5 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [4b34888f] + QOI v1.0.1 [1fd47b50] + QuadGK v2.11.2 [94ee1d12] + Quaternions v0.7.6 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [c1ae055f] + RealDot v0.1.0 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.36.0 [189a3867] + Reexport v1.2.2 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [5eaf0fd0] + RoundingEmulator v0.2.1 [7e49a35a] + RuntimeGeneratedFunctions v0.5.15 [fdea26ae] + SIMD v3.7.1 ⌃ [0bca4576] + SciMLBase 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[4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 16.94s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 7472.4 ms ✓ Polynomials → PolynomialsMakieCoreExt 1778.7 ms ✓ MLDataDevices → MLDataDevicesChainRulesExt 27697.3 ms ✓ Manifolds 2758.1 ms ✓ KernelAbstractions → EnzymeExt 2909.9 ms ✓ NNlib → NNlibEnzymeCoreExt 4595.0 ms ✓ NLSolversBase 8774.2 ms ✓ UnsafeAtomics → UnsafeAtomicsLLVM 11325.5 ms ? GPUCompiler 192105.4 ms ✓ Makie 7730.4 ms ✓ Manifolds → ManifoldsTestExt 6812.9 ms ✓ Manifolds → ManifoldsRecursiveArrayToolsExt 6025.2 ms ✓ Manifolds → ManifoldsRecipesBaseExt 6321.9 ms ✓ LineSearches 44306.6 ms ✓ GPUArrays 20518.9 ms ? Enzyme 279593.3 ms ✓ DomainSets → DomainSetsMakieExt 314111.1 ms ✓ SciMLBase → SciMLBaseMakieExt ✗ GLMakie 8656.0 ms ✓ Manifolds → ManifoldsDistributionsExt 325096.1 ms ✓ SymbolicAnalysis ✗ Optim 6935.6 ms ✓ MLDataDevices → MLDataDevicesGPUArraysExt 8279.8 ms ✓ Zygote → ZygoteColorsExt 76652.8 ms ✓ ManifoldDiff → ManifoldDiffZygoteExt 76500.3 ms ✓ MLDataDevices → MLDataDevicesZygoteExt 95425.4 ms ✓ RecursiveArrayTools → RecursiveArrayToolsZygoteExt 19430.7 ms ✓ SciMLBase → SciMLBaseZygoteExt 50870.9 ms ? Enzyme → EnzymeStaticArraysExt 20897.1 ms ? Enzyme → EnzymeSpecialFunctionsExt 20844.1 ms ? Enzyme → EnzymeChainRulesCoreExt 20699.4 ms ? Enzyme → EnzymeLogExpFunctionsExt 22598.4 ms ? QuadGK → QuadGKEnzymeExt 271387.5 ms ? OptimizationBase 132877.6 ms ✓ Flux 42067.0 ms ✓ OptimizationBase → OptimizationFiniteDiffExt 40503.9 ms ? OptimizationBase → OptimizationEnzymeExt 103300.1 ms ✓ OptimizationBase → OptimizationZygoteExt 19494.7 ms ✓ OptimizationBase → OptimizationForwardDiffExt 22541.8 ms ✓ Optimization 140758.5 ms ? Flux → FluxEnzymeExt ✗ OptimizationOptimJL 36507.2 ms ? DJUICE 28 dependencies successfully precompiled in 2630 seconds. 472 already precompiled. 11 dependencies failed but may be precompilable after restarting julia 16 dependencies had output during precompilation: ┌ Enzyme → EnzymeSpecialFunctionsExt │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ WARNING: Constructor for type "MethodError" was extended in `GPUCompiler` without explicit qualification or import. │ NOTE: Assumed "MethodError" refers to `Base.MethodError`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function MethodError end`. │ Hint: To silence the warning, qualify `MethodError` as `Base.MethodError` in the method signature or explicitly `import Base: MethodError`. │ WARNING: Method definition (::Type{MethodError})(Any, Any) in module Core at boot.jl:446 overwritten in module GPUCompiler at /home/pkgeval/.julia/packages/GPUCompiler/y4cj1/src/jlgen.jl:38. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ Enzyme → EnzymeChainRulesCoreExt │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ WARNING: Constructor for type "MethodError" was extended in `GPUCompiler` without explicit qualification or import. │ NOTE: Assumed "MethodError" refers to `Base.MethodError`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function MethodError end`. │ Hint: To silence the warning, qualify `MethodError` as `Base.MethodError` in the method signature or explicitly `import Base: MethodError`. │ WARNING: Method definition (::Type{MethodError})(Any, Any) in module Core at boot.jl:446 overwritten in module GPUCompiler at /home/pkgeval/.julia/packages/GPUCompiler/y4cj1/src/jlgen.jl:38. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ DJUICE │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ WARNING: Constructor for type "MethodError" was extended in `GPUCompiler` without explicit qualification or import. │ NOTE: Assumed "MethodError" refers to `Base.MethodError`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function MethodError end`. │ Hint: To silence the warning, qualify `MethodError` as `Base.MethodError` in the method signature or explicitly `import Base: MethodError`. │ WARNING: Method definition (::Type{MethodError})(Any, Any) in module Core at boot.jl:446 overwritten in module GPUCompiler at /home/pkgeval/.julia/packages/GPUCompiler/y4cj1/src/jlgen.jl:38. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ UnsafeAtomics → UnsafeAtomicsLLVM │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 └ ┌ Enzyme │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ WARNING: Constructor for type "MethodError" was extended in `GPUCompiler` without explicit qualification or import. │ NOTE: Assumed "MethodError" refers to `Base.MethodError`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function MethodError end`. │ Hint: To silence the warning, qualify `MethodError` as `Base.MethodError` in the method signature or explicitly `import Base: MethodError`. │ WARNING: Method definition (::Type{MethodError})(Any, Any) in module Core at boot.jl:446 overwritten in module GPUCompiler at /home/pkgeval/.julia/packages/GPUCompiler/y4cj1/src/jlgen.jl:38. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ QuadGK → QuadGKEnzymeExt │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ WARNING: Constructor for type "MethodError" was extended in `GPUCompiler` without explicit qualification or import. │ NOTE: Assumed "MethodError" refers to `Base.MethodError`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function MethodError end`. │ Hint: To silence the warning, qualify `MethodError` as `Base.MethodError` in the method signature or explicitly `import Base: MethodError`. │ WARNING: Method definition (::Type{MethodError})(Any, Any) in module Core at boot.jl:446 overwritten in module GPUCompiler at /home/pkgeval/.julia/packages/GPUCompiler/y4cj1/src/jlgen.jl:38. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ OptimizationBase → OptimizationEnzymeExt │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ WARNING: Constructor for type "MethodError" was extended in `GPUCompiler` without explicit qualification or import. │ NOTE: Assumed "MethodError" refers to `Base.MethodError`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function MethodError end`. │ Hint: To silence the warning, qualify `MethodError` as `Base.MethodError` in the method signature or explicitly `import Base: MethodError`. │ WARNING: Method definition (::Type{MethodError})(Any, Any) in module Core at boot.jl:446 overwritten in module GPUCompiler at /home/pkgeval/.julia/packages/GPUCompiler/y4cj1/src/jlgen.jl:38. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ GPUCompiler │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ WARNING: Constructor for type "MethodError" was extended in `GPUCompiler` without explicit qualification or import. │ NOTE: Assumed "MethodError" refers to `Base.MethodError`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function MethodError end`. │ Hint: To silence the warning, qualify `MethodError` as `Base.MethodError` in the method signature or explicitly `import Base: MethodError`. │ WARNING: Method definition (::Type{MethodError})(Any, Any) in module Core at boot.jl:446 overwritten in module GPUCompiler at /home/pkgeval/.julia/packages/GPUCompiler/y4cj1/src/jlgen.jl:38. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ OptimizationBase │ WARNING: Constructor for type "PowerManifold" was extended in `Manifolds` without explicit qualification or import. │ NOTE: Assumed "PowerManifold" refers to `ManifoldsBase.PowerManifold`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function PowerManifold end`. │ Hint: To silence the warning, qualify `PowerManifold` as `ManifoldsBase.PowerManifold` in the method signature or explicitly `import ManifoldsBase: PowerManifold`. │ WARNING: Constructor for type "Matrix" was extended in `Manifolds` without explicit qualification or import. │ NOTE: Assumed "Matrix" refers to `Base.Matrix`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Matrix end`. │ Hint: To silence the warning, qualify `Matrix` as `Base.Matrix` in the method signature or explicitly `import Base: Matrix`. │ WARNING: Method definition cov(FillArrays.AbstractFill{T, 2, Axes} where Axes) where {T<:Number} in module FillArraysStatisticsExt at /home/pkgeval/.julia/packages/FillArrays/lVl4c/ext/FillArraysStatisticsExt.jl:23 overwritten in module FillArraysStatisticsExt on the same line (check for duplicate calls to `include`). │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ MLDataDevices → MLDataDevicesGPUArraysExt │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 └ ┌ Flux → FluxEnzymeExt │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ WARNING: Constructor for type "MethodError" was extended in `GPUCompiler` without explicit qualification or import. │ NOTE: Assumed "MethodError" refers to `Base.MethodError`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function MethodError end`. │ Hint: To silence the warning, qualify `MethodError` as `Base.MethodError` in the method signature or explicitly `import Base: MethodError`. │ WARNING: Method definition (::Type{MethodError})(Any, Any) in module Core at boot.jl:446 overwritten in module GPUCompiler at /home/pkgeval/.julia/packages/GPUCompiler/y4cj1/src/jlgen.jl:38. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ Enzyme → EnzymeLogExpFunctionsExt │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ WARNING: Constructor for type "MethodError" was extended in `GPUCompiler` without explicit qualification or import. │ NOTE: Assumed "MethodError" refers to `Base.MethodError`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function MethodError end`. │ Hint: To silence the warning, qualify `MethodError` as `Base.MethodError` in the method signature or explicitly `import Base: MethodError`. │ WARNING: Method definition (::Type{MethodError})(Any, Any) in module Core at boot.jl:446 overwritten in module GPUCompiler at /home/pkgeval/.julia/packages/GPUCompiler/y4cj1/src/jlgen.jl:38. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ Manifolds │ WARNING: Constructor for type "PowerManifold" was extended in `Manifolds` without explicit qualification or import. │ NOTE: Assumed "PowerManifold" refers to `ManifoldsBase.PowerManifold`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function PowerManifold end`. │ Hint: To silence the warning, qualify `PowerManifold` as `ManifoldsBase.PowerManifold` in the method signature or explicitly `import ManifoldsBase: PowerManifold`. │ WARNING: Constructor for type "Matrix" was extended in `Manifolds` without explicit qualification or import. │ NOTE: Assumed "Matrix" refers to `Base.Matrix`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Matrix end`. │ Hint: To silence the warning, qualify `Matrix` as `Base.Matrix` in the method signature or explicitly `import Base: Matrix`. └ ┌ GPUArrays │ ┌ Warning: LLVM.jl has not been tested with LLVM versions newer than 18. │ └ @ LLVM.API ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:47 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 └ ┌ SymbolicAnalysis │ WARNING: Constructor for type "PowerManifold" was extended in `Manifolds` without explicit qualification or import. │ NOTE: Assumed "PowerManifold" refers to `ManifoldsBase.PowerManifold`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function PowerManifold end`. │ Hint: To silence the warning, qualify `PowerManifold` as `ManifoldsBase.PowerManifold` in the method signature or explicitly `import ManifoldsBase: PowerManifold`. │ WARNING: Constructor for type "Matrix" was extended in `Manifolds` without explicit qualification or import. │ NOTE: Assumed "Matrix" refers to `Base.Matrix`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Matrix end`. │ Hint: To silence the warning, qualify `Matrix` as `Base.Matrix` in the method signature or explicitly `import Base: Matrix`. └ ┌ Enzyme → EnzymeStaticArraysExt │ ┌ Warning: LLVM.jl has not been tested with LLVM versions newer than 18. │ └ @ LLVM.API ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:47 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-julia_version+1.13.0-llvm_version+20.asserts │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/apc9G/src/LLVM.jl:110 │ WARNING: Constructor for type "MethodError" was extended in `GPUCompiler` without explicit qualification or import. │ NOTE: Assumed "MethodError" refers to `Base.MethodError`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function MethodError end`. │ Hint: To silence the warning, qualify `MethodError` as `Base.MethodError` in the method signature or explicitly `import Base: MethodError`. │ WARNING: Method definition (::Type{MethodError})(Any, Any) in module Core at boot.jl:446 overwritten in module GPUCompiler at /home/pkgeval/.julia/packages/GPUCompiler/y4cj1/src/jlgen.jl:38. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ Precompilation completed after 2627.29s ################################################################################ # Loading # Loading DJUICE... Precompiling packages... 6253.1 ms ✓ Manifolds → ManifoldsRecipesBaseExt 11004.1 ms ? GPUCompiler ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 657 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_24053.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000071fe001c44c0 Total snapshots: 420. Utilization: 0% ╎420 @Base/task.jl:1129 wait_forever() 419╎ 420 @Base/task.jl:1192 wait() ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_24053.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007f76700a8880 Total snapshots: 425. Utilization: 0% ╎425 @Base/task.jl:1129 wait_forever() 424╎ 425 @Base/task.jl:1192 wait() 31175.8 ms ✓ GPUArrays [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_24053.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 18497605 (Pool: 18496968; Big: 637); GC: 13 [657] signal 15: Terminated in expression starting at none:1 access at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__fs_work at /workspace/srcdir/libuv/src/unix/fs.c:1633 uv_fs_access at /workspace/srcdir/libuv/src/unix/fs.c:1720 jl_fs_access at /source/src/jl_uv.c:632 ispath at ./stat.jl:377 resolve_depot at ./loading.jl:3385 parse_cache_header at ./loading.jl:3512 #stale_cachefile#915 at ./loading.jl:3963 stale_cachefile at ./loading.jl:3945 [inlined] #886 at ./loading.jl:1839 [inlined] get! at ./dict.jl:459 #compilecache_path#879 at ./loading.jl:1839 compilecache_path at ./loading.jl:1817 [inlined] #isprecompiled#888 at ./loading.jl:1882 [inlined] isprecompiled at ./loading.jl:1875 [inlined] #_precompilepkgs##32 at ./precompilation.jl:928 jfptr_YY._precompilepkgsYY.YY.32_2190.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 15344686 (Pool: 15344446; Big: 240); GC: 34 PkgEval terminated after 2740.42s: test duration exceeded the time limit