Package evaluation of PeriLab on Julia 1.13.0-DEV.111 (ce76dbf07d*) started at 2025-02-28T05:42:55.588 ################################################################################ # Set-up # Set-up completed after 0.27s ################################################################################ # Installation # Installing PeriLab... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [2ecefcea] + PeriLab v1.3.3 Updating `~/.julia/environments/v1.13/Manifest.toml` [bc6b9049] + AbaqusReader v0.2.6 [79e6a3ab] + Adapt v4.2.0 [dce04be8] + ArgCheck v2.4.0 [c7e460c6] + ArgParse v1.2.0 [4fba245c] + ArrayInterface v7.18.0 [a9b6321e] + Atomix v1.1.1 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] + CPUSummary v0.2.6 [336ed68f] + CSV v0.10.15 [fb6a15b2] + CloseOpenIntervals v0.1.13 [6309b1aa] + CodecInflate64 v0.1.3 [944b1d66] + CodecZlib v0.7.8 [861a8166] + Combinatorics v1.0.2 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.16.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.20 [e2d170a0] + DataValueInterfaces v1.0.0 [39dd38d3] + Dierckx v0.5.4 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [ffbed154] + DocStringExtensions v0.9.3 [f57ae99e] + Exodus v0.13.7 [e2ba6199] + ExprTools v0.1.10 [442a2c76] + FastGaussQuadrature v1.0.2 [48062228] + FilePathsBase v0.9.23 [f6369f11] + ForwardDiff v0.10.38 [46192b85] + GPUArraysCore v0.2.0 [3e5b6fbb] + HostCPUFeatures v0.1.17 [615f187c] + IfElse v0.1.1 [842dd82b] + InlineStrings v1.4.3 [0c81fc1b] + InputBuffers v1.0.0 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [0f8b85d8] + JSON3 v1.14.1 [63c18a36] + KernelAbstractions v0.9.34 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 [bdcacae8] + LoopVectorization v0.12.171 [da04e1cc] + MPI v0.20.22 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.15 [d125e4d3] + ManualMemory v0.1.8 [e1d29d7a] + Missings v1.2.0 [77ba4419] + NaNMath v1.1.2 [4d1e1d77] + Nullables v1.0.0 [6fe1bfb0] + OffsetArrays v1.15.0 [bac558e1] + OrderedCollections v1.8.0 [69de0a69] + Parsers v2.8.1 [2ecefcea] + PeriLab v1.3.3 [eebad327] + PkgVersion v0.3.3 [b33f1834] + PointInPoly v1.2.0 [1c4d5385] + PointNeighbors v0.4.8 [f517fe37] + Polyester v0.7.16 [1d0040c9] + PolyesterWeave v0.2.2 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [49802e3a] + ProgressBars v1.5.1 [94ee1d12] + Quaternions v0.7.6 [c1ae055f] + RealDot v0.1.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [6038ab10] + Rotations v1.7.1 [fdea26ae] + SIMD v3.7.1 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 [91c51154] + SentinelArrays v1.4.8 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [aedffcd0] + Static v1.1.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.12 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [7792a7ef] + StrideArraysCore v0.5.7 [69024149] + StringEncodings v0.3.7 [892a3eda] + StringManipulation v0.4.1 [856f2bd8] + StructTypes v1.11.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [48a634ad] + Tensors v1.16.1 [b718987f] + TextWrap v1.0.2 [8290d209] + ThreadingUtilities v0.5.2 [a759f4b9] + TimerOutputs v0.5.27 [3bb67fe8] + TranscodingStreams v0.11.3 [3a884ed6] + UnPack v1.0.2 [013be700] + UnsafeAtomics v0.3.0 [3d5dd08c] + VectorizationBase v0.21.71 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 [ddb6d928] + YAML v0.4.12 [49080126] + ZipArchives v2.4.1 [0b7ba130] + Blosc_jll v1.21.6+2 [6e34b625] + Bzip2_jll v1.0.9+0 [cd4c43a9] + Dierckx_jll v0.2.0+0 [fc7263ad] + Exodus_jll v8.19.1+0 ⌅ [5dc1e892] + Fmt_jll v9.1.0+0 ⌅ [0234f1f7] + HDF5_jll v1.14.3+3 [e33a78d0] + Hwloc_jll v2.12.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [5ced341a] + Lz4_jll v1.10.1+0 [7cb0a576] + MPICH_jll v4.3.0+0 [f1f71cc9] + MPItrampoline_jll v5.5.2+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [7243133f] + NetCDF_jll v400.902.211+1 ⌅ [fe0851c0] + OpenMPI_jll v4.1.6+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [02c8fc9c] + XML2_jll v2.13.6+1 [ffd25f8a] + XZ_jll v5.6.4+1 [3161d3a3] + Zstd_jll v1.5.7+1 [477f73a3] + libaec_jll v1.1.3+0 [337d8026] + libzip_jll v1.11.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 11.0s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... ✗ PeriLab 0 dependencies successfully precompiled in 323 seconds. 168 already precompiled. ERROR: LoadError: The following 1 direct dependency failed to precompile: PeriLab Failed to precompile PeriLab [2ecefcea-59f0-46dd-9cfd-1d2b8cc5f112] to "/home/pkgeval/.julia/compiled/v1.13/PeriLab/jl_nPi012" (ProcessExited(1)). WARNING: Constructor for type "Int16" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Int16" refers to `Base.Int16`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Int16 end`. Hint: To silence the warning, qualify `Int16` as `Base.Int16` or explicitly `import Base: Int16` WARNING: Constructor for type "Int64" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Int64" refers to `Base.Int64`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Int64 end`. Hint: To silence the warning, qualify `Int64` as `Base.Int64` or explicitly `import Base: Int64` WARNING: Constructor for type "Int32" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Int32" refers to `Base.Int32`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Int32 end`. Hint: To silence the warning, qualify `Int32` as `Base.Int32` or explicitly `import Base: Int32` WARNING: Constructor for type "UInt8" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "UInt8" refers to `Base.UInt8`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function UInt8 end`. Hint: To silence the warning, qualify `UInt8` as `Base.UInt8` or explicitly `import Base: UInt8` WARNING: Constructor for type "UInt16" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "UInt16" refers to `Base.UInt16`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function UInt16 end`. Hint: To silence the warning, qualify `UInt16` as `Base.UInt16` or explicitly `import Base: UInt16` WARNING: Constructor for type "Float32" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Float32" refers to `Base.Float32`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Float32 end`. Hint: To silence the warning, qualify `Float32` as `Base.Float32` or explicitly `import Base: Float32` WARNING: Constructor for type "UInt64" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "UInt64" refers to `Base.UInt64`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function UInt64 end`. Hint: To silence the warning, qualify `UInt64` as `Base.UInt64` or explicitly `import Base: UInt64` WARNING: Constructor for type "Bool" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Bool" refers to `Base.Bool`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Bool end`. Hint: To silence the warning, qualify `Bool` as `Base.Bool` or explicitly `import Base: Bool` WARNING: Constructor for type "Int8" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Int8" refers to `Base.Int8`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Int8 end`. Hint: To silence the warning, qualify `Int8` as `Base.Int8` or explicitly `import Base: Int8` WARNING: Constructor for type "Float64" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Float64" refers to `Base.Float64`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Float64 end`. Hint: To silence the warning, qualify `Float64` as `Base.Float64` or explicitly `import Base: Float64` WARNING: Constructor for type "UInt32" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "UInt32" refers to `Base.UInt32`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function UInt32 end`. Hint: To silence the warning, qualify `UInt32` as `Base.UInt32` or explicitly `import Base: UInt32` WARNING: Constructor for type "Float16" was extended in `VectorizationBase` without explicit qualification or import. NOTE: Assumed "Float16" refers to `Base.Float16`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Float16 end`. Hint: To silence the warning, qualify `Float16` as `Base.Float16` or explicitly `import Base: Float16` ERROR: LoadError: cannot define function eval; it already has a value Stacktrace: [1] top-level scope @ ~/.julia/packages/PeriLab/NN2hq/src/FEM/FEM_Factory.jl:175 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:308 [3] top-level scope @ ~/.julia/packages/PeriLab/NN2hq/src/Models/Model_Factory.jl:19 [4] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:308 [5] top-level scope @ ~/.julia/packages/PeriLab/NN2hq/src/Core/Solver/Solver_control.jl:20 [6] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:308 [7] top-level scope @ ~/.julia/packages/PeriLab/NN2hq/src/PeriLab.jl:41 [8] include(mod::Module, _path::String) @ Base ./Base.jl:307 [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3004 [10] top-level scope @ stdin:6 [11] eval(m::Module, e::Any) @ Core ./boot.jl:488 [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2855 [13] include_string @ ./loading.jl:2865 [inlined] [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [15] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/PeriLab/NN2hq/src/FEM/FEM_Factory.jl:4 in expression starting at /home/pkgeval/.julia/packages/PeriLab/NN2hq/src/Models/Model_Factory.jl:5 in expression starting at /home/pkgeval/.julia/packages/PeriLab/NN2hq/src/Core/Solver/Solver_control.jl:5 in expression starting at /home/pkgeval/.julia/packages/PeriLab/NN2hq/src/PeriLab.jl:37 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 336.56s ################################################################################ # Loading # Loading PeriLab... Precompiling packages... Info Given PeriLab was explicitly requested, output will be shown live  ERROR: LoadError: cannot define function eval; it already has a value Stacktrace:  [1] top-level scope  @ ~/.julia/packages/PeriLab/NN2hq/src/FEM/FEM_Factory.jl:175  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:308  [3] top-level scope  @ ~/.julia/packages/PeriLab/NN2hq/src/Models/Model_Factory.jl:19  [4] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:308  [5] top-level scope  @ ~/.julia/packages/PeriLab/NN2hq/src/Core/Solver/Solver_control.jl:20  [6] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:308  [7] top-level scope  @ ~/.julia/packages/PeriLab/NN2hq/src/PeriLab.jl:41  [8] include(mod::Module, _path::String)  @ Base ./Base.jl:307  [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3004  [10] top-level scope  @ stdin:6  [11] eval(m::Module, e::Any)  @ Core ./boot.jl:488  [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2855  [13] include_string  @ ./loading.jl:2865 [inlined]  [14] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:326  [15] _start()  @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/PeriLab/NN2hq/src/FEM/FEM_Factory.jl:4 in expression starting at /home/pkgeval/.julia/packages/PeriLab/NN2hq/src/Models/Model_Factory.jl:5 in expression starting at /home/pkgeval/.julia/packages/PeriLab/NN2hq/src/Core/Solver/Solver_control.jl:5 in expression starting at /home/pkgeval/.julia/packages/PeriLab/NN2hq/src/PeriLab.jl:37 in expression starting at stdin:6 ✗ PeriLab 0 dependencies successfully precompiled in 75 seconds. 168 already precompiled. ERROR: The following 1 direct dependency failed to precompile: PeriLab Failed to precompile PeriLab [2ecefcea-59f0-46dd-9cfd-1d2b8cc5f112] to "/home/pkgeval/.julia/compiled/v1.13/PeriLab/jl_IpC7as" (ProcessExited(1)). ERROR: LoadError: cannot define function eval; it already has a value Stacktrace: [1] top-level scope @ ~/.julia/packages/PeriLab/NN2hq/src/FEM/FEM_Factory.jl:175 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:308 [3] top-level scope @ ~/.julia/packages/PeriLab/NN2hq/src/Models/Model_Factory.jl:19 [4] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:308 [5] top-level scope @ ~/.julia/packages/PeriLab/NN2hq/src/Core/Solver/Solver_control.jl:20 [6] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:308 [7] top-level scope @ ~/.julia/packages/PeriLab/NN2hq/src/PeriLab.jl:41 [8] include(mod::Module, _path::String) @ Base ./Base.jl:307 [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3004 [10] top-level scope @ stdin:6 [11] eval(m::Module, e::Any) @ Core ./boot.jl:488 [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2855 [13] include_string @ ./loading.jl:2865 [inlined] [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [15] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/PeriLab/NN2hq/src/FEM/FEM_Factory.jl:4 in expression starting at /home/pkgeval/.julia/packages/PeriLab/NN2hq/src/Models/Model_Factory.jl:5 in expression starting at /home/pkgeval/.julia/packages/PeriLab/NN2hq/src/Core/Solver/Solver_control.jl:5 in expression starting at /home/pkgeval/.julia/packages/PeriLab/NN2hq/src/PeriLab.jl:37 in expression starting at stdin: Loading failed after 77.6s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using PeriLab'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:598 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:513 [3] run(::Cmd) @ Base ./process.jl:510 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:307 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [7] _start() @ Base ./client.jl:560 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 447.75s: package fails to precompile