Package evaluation of MLJLinearModels on Julia 1.13.0-DEV.111 (ce76dbf07d*) started at 2025-02-28T02:20:06.573 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 7.83s ################################################################################ # Installation # Installing MLJLinearModels... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [6ee0df7b] + MLJLinearModels v0.10.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [79e6a3ab] + Adapt v4.2.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.18.0 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [187b0558] + ConstructionBase v1.5.8 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.20 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [ffbed154] + DocStringExtensions v0.9.3 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [f6369f11] + ForwardDiff v0.10.38 [92d709cd] + IrrationalConstants v0.2.4 [42fd0dbc] + IterativeSolvers v0.9.4 [692b3bcd] + JLLWrappers v1.7.0 [d3d80556] + LineSearches v7.3.0 [7a12625a] + LinearMaps v3.11.4 [2ab3a3ac] + LogExpFunctions v0.3.29 [6ee0df7b] + MLJLinearModels v0.10.0 [e80e1ace] + MLJModelInterface v1.11.0 [1914dd2f] + MacroTools v0.5.15 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.8.3 [77ba4419] + NaNMath v1.1.2 [429524aa] + Optim v1.11.0 [bac558e1] + OrderedCollections v1.8.0 [d96e819e] + Parameters v0.12.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [43287f4e] + PtrArrays v1.3.0 [3cdcf5f2] + RecipesBase v1.3.4 [ae029012] + Requires v1.3.1 [30f210dd] + ScientificTypesBase v3.0.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [1e83bf80] + StaticArraysCore v1.4.3 [64bff920] + StatisticalTraits v3.4.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [3a884ed6] + UnPack v1.0.2 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.3.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 Installation completed after 4.0s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 178.14s ################################################################################ # Testing # Testing MLJLinearModels Status `/tmp/jl_m0ZrlA/Project.toml` [336ed68f] CSV v0.10.15 [a93c6f00] DataFrames v1.7.0 [8bb1440f] DelimitedFiles v1.9.1 [f6369f11] ForwardDiff v0.10.38 ⌅ [add582a8] MLJ v0.19.5 ⌅ [a7f614a8] MLJBase v0.21.14 [6ee0df7b] MLJLinearModels v0.10.0 [429524aa] Optim v1.11.0 [438e738f] PyCall v1.96.4 ⌅ [6f49c342] RCall v0.13.18 [ce6b1742] RDatasets v0.7.7 [860ef19b] StableRNGs v1.0.2 [f43a241f] Downloads v1.7.0 [37e2e46d] LinearAlgebra v1.12.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_m0ZrlA/Manifest.toml` [da404889] ARFFFiles v1.5.0 [79e6a3ab] Adapt v4.2.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.18.0 [d1d4a3ce] BitFlags v0.1.9 [336ed68f] CSV v0.10.15 [324d7699] CategoricalArrays v0.10.8 [af321ab8] CategoricalDistributions v0.1.15 [944b1d66] CodecZlib v0.7.8 [3da002f7] ColorTypes v0.12.0 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Testing Running tests... Precompiling packages... 92678.4 ms ✓ DataFrames 1 dependency successfully precompiled in 94 seconds. 34 already precompiled. Precompiling packages... 5592.0 ms ✓ ARFFFiles 3278.8 ms ✓ StatsFuns 8262.3 ms ✓ MLFlowClient 8010.9 ms ✓ OpenML 16921.8 ms ✓ Distributions 6006.4 ms ✓ Distributions → DistributionsTestExt 10517.5 ms ✓ ScientificTypes 8681.1 ms ✓ CategoricalDistributions 28971.7 ms ✓ MLJModels 58548.9 ms ✓ MLJBase 12430.3 ms ✓ MLJIteration 11873.7 ms ✓ MLJFlow 10130.1 ms ✓ MLJTuning 9149.7 ms ✓ MLJEnsembles 20149.5 ms ✓ MLJ 15 dependencies successfully precompiled in 220 seconds. 124 already precompiled. == UTILS == Test Summary: | Pass Total Time Checks | 4 4 2.9s Test Summary: | Pass Total Time Augment | 2 2 0.4s Test Summary: | Pass Total Time Apply | 8 8 6.1s Test Summary: | Pass Total Time Sigmoid | 13 13 0.1s Test Summary: | Pass Total Time Hat matrix | 1 1 3.8s Test Summary: | Pass Total Time Soft-thresh | 1 1 2.2s Test Summary: | Pass Total Time Clip | 2 2 1.4s == LOSS-PENALTY == > generic < Test Summary: | Pass Total Time LPCost basics | 11 11 1.7s Test Summary: | Pass Total Time Comp LPs | 30 30 6.8s Test Summary: | Pass Total Time Compose | 19 19 0.4s Test Summary: | Pass Total Time Logistic | 1 1 1.2s Test Summary: | Pass Total Time Multinomial | 12 12 0.7s > utils < Test Summary: | Pass Total Time elastic net | 7 7 0.3s > robust < WARNING: Method definition (::Main.var"#p1#p1##0"{δ})(Any) in module Main at /home/pkgeval/.julia/packages/MLJLinearModels/yYgtO/test/loss-penalty/robust.jl:14 overwritten at /home/pkgeval/.julia/packages/MLJLinearModels/yYgtO/test/loss-penalty/robust.jl:19. WARNING: Method definition (::Main.var"#p2#p2##0"{δ})(Any) in module Main at /home/pkgeval/.julia/packages/MLJLinearModels/yYgtO/test/loss-penalty/robust.jl:15 overwritten at /home/pkgeval/.julia/packages/MLJLinearModels/yYgtO/test/loss-penalty/robust.jl:20. WARNING: Method definition (::Main.var"#p1#p1##0"{δ})(Any) in module Main at /home/pkgeval/.julia/packages/MLJLinearModels/yYgtO/test/loss-penalty/robust.jl:19 overwritten at /home/pkgeval/.julia/packages/MLJLinearModels/yYgtO/test/loss-penalty/robust.jl:30. WARNING: Method definition (::Main.var"#p2#p2##0"{δ})(Any) in module Main at /home/pkgeval/.julia/packages/MLJLinearModels/yYgtO/test/loss-penalty/robust.jl:20 overwritten at /home/pkgeval/.julia/packages/MLJLinearModels/yYgtO/test/loss-penalty/robust.jl:31. Test Summary: | Pass Total Time Robust Loss | 7 7 6.3s == GLR == > constructors < Test Summary: | Pass Total Time Constructors | 49 49 1.0s Test Summary: | Pass Total Time Multinomial | 6 6 0.2s > utils < Test Summary: | Pass Total Time Tools | 2 2 0.5s Test Summary: | Pass Total Time Objectives | 10 10 4.0s > grads-hess < Test Summary: | Pass Total Time GH> Ridge | 4 4 2.9s Test Summary: | Pass Total Time GH> EN/Lasso | 8 8 2.4s WARNING: Method definition logsigmoid(Any) in module Main at /home/pkgeval/.julia/packages/MLJLinearModels/yYgtO/test/glr/grad-hess-prox.jl:109 overwritten at /home/pkgeval/.julia/packages/MLJLinearModels/yYgtO/test/glr/grad-hess-prox.jl:144. WARNING: Method definition objective2(Any) in module Main at /home/pkgeval/.julia/packages/MLJLinearModels/yYgtO/test/glr/grad-hess-prox.jl:110 overwritten at /home/pkgeval/.julia/packages/MLJLinearModels/yYgtO/test/glr/grad-hess-prox.jl:145. Test Summary: | Pass Total Time GH> LogitL2 | 16 16 34.1s Test Summary: | Pass Total Time GH> MultinL2 | 6 6 12.4s Test Summary: | Pass Total Time GH> Huber | 13 13 9.1s == FIT == > ols-ridge-lasso-elnet < Test Summary: | Pass Total Time linreg | 3 3 5.7s Test Summary: | Pass Total Time ridgereg | 5 5 4.2s Test Summary: | Pass Total Time lasso | 19 19 5.4s Test Summary: | Pass Total Time elnet | 12 12 4.5s Test Summary: | Pass Total Time gramian | 2 2 0.3s > logistic & multinomial < Test Summary: | Pass Total Time Logreg | 13 13 23.6s Test Summary: | Pass Total Time Multinomial | 9 9 4.1s Test Summary: | Pass Total Time Logreg/EN | 9 9 9.1s Test Summary: | Pass Total Time Multin/EN | 8 8 10.1s > robust < Test Summary: | Pass Total Time HuberReg | 17 17 14.6s Test Summary: | Pass Total Time AndrewsReg | 6 6 10.1s Test Summary: | Pass Total Time BisquareReg | 6 6 9.9s Test Summary: | Pass Total Time LogisticReg | 6 6 9.0s Test Summary: | Pass Total Time FairReg | 6 6 10.0s Test Summary: | Pass Total Time TalwarReg | 6 6 9.9s Test Summary: | Pass Total Time Robust+L1 | 6 6 5.3s > quantile & LAD < Test Summary: | Pass Total Time QuantileReg | 11 11 8.8s Test Summary: | Pass Total Time LAD+L1 | 5 5 3.9s == MLJ == > metadata < Test Summary: | Pass Total Time meta-pkg | 5 5 0.0s Test Summary: | Pass Total Time meta-reg | 5 5 4.8s Test Summary: | Pass Total Time meta-clf | 5 5 0.2s > fit-predict < ┌ Info: Solver: Analytical │ iterative: Bool false └ max_inner: Int64 200 Test Summary: | Pass Total Time ridge-reg | 2 2 8.8s ┌ Info: Solver: LBFGS{Optim.Options{Float64, Nothing}, @NamedTuple{}} │ optim_options: Optim.Options{Float64, Nothing} └ lbfgs_options: @NamedTuple{} NamedTuple() Test Summary: | Pass Total Time logistic | 1 1 35.5s ┌ Info: Solver: LBFGS{Optim.Options{Float64, Nothing}, @NamedTuple{}} │ optim_options: Optim.Options{Float64, Nothing} └ lbfgs_options: @NamedTuple{} NamedTuple() [ Info: Training machine(MultinomialClassifier(lambda = 0.5, …), …). ┌ Info: Solver: LBFGS{Optim.Options{Float64, Nothing}, @NamedTuple{}} │ optim_options: Optim.Options{Float64, Nothing} └ lbfgs_options: @NamedTuple{} NamedTuple() Test Summary: | Pass Total Time multinomial | 2 2 29.6s Test Summary: | Pass Total Time String-Symbol | 3 3 0.1s [ Info: Training machine(LogisticClassifier(lambda = 2.220446049250313e-16, …), …). ┌ Info: Solver: LBFGS{Optim.Options{Float64, Nothing}, @NamedTuple{}} │ optim_options: Optim.Options{Float64, Nothing} └ lbfgs_options: @NamedTuple{} NamedTuple() Test Summary: | Pass Total Time Logistic-m | 1 1 8.3s Test Summary: | Pass Total Time Fitting a classifier with verbosity=1 | 1 1 20.6s > extras < ┌ Warning: horizontal concatenation of data frame with a vector is deprecated. Pass DataFrame(x1=x) instead. │ caller = #hcat#133 at abstractdataframe.jl:1640 [inlined] └ @ Core ~/.julia/packages/DataFrames/kcA9R/src/abstractdataframe/abstractdataframe.jl:1640 [ Info: Training machine(LogisticClassifier(lambda = 2.220446049250313e-16, …), …). ┌ Info: Solver: LBFGS{Optim.Options{Float64, Nothing}, @NamedTuple{}} │ optim_options: Optim.Options{Float64, Nothing} └ lbfgs_options: @NamedTuple{} NamedTuple() [ Info: Training machine(LogisticClassifier(lambda = 2.220446049250313e-16, …), …). ┌ Info: Solver: LBFGS{Optim.Options{Float64, Nothing}, @NamedTuple{}} │ optim_options: Optim.Options{Float64, Nothing} └ lbfgs_options: @NamedTuple{} NamedTuple() Test Summary: | Pass Total Time Levels | 2 2 49.8s [ Info: Training machine(MultinomialClassifier(lambda = 2.220446049250313e-16, …), …). ┌ Info: Solver: LBFGS{Optim.Options{Float64, Nothing}, @NamedTuple{}} │ optim_options: Optim.Options{Float64, Nothing} └ lbfgs_options: @NamedTuple{} NamedTuple() Test Summary: | Total Time Binary | 0 5.2s [ Info: Training machine(MultinomialClassifier(lambda = 2.220446049250313e-16, …), …). ┌ Info: Solver: LBFGS{Optim.Options{Float64, Nothing}, @NamedTuple{}} │ optim_options: Optim.Options{Float64, Nothing} └ lbfgs_options: @NamedTuple{} NamedTuple() [ Info: Training machine(LogisticClassifier(lambda = 2.220446049250313e-16, …), …). ┌ Info: Solver: LBFGS{Optim.Options{Float64, Nothing}, @NamedTuple{}} │ optim_options: Optim.Options{Float64, Nothing} └ lbfgs_options: @NamedTuple{} NamedTuple() Test Summary: | Pass Total Time Crabs | 2 2 10.7s == MISC == > benchmarks < Testing MLJLinearModels tests passed Testing completed after 786.3s PkgEval succeeded after 1018.96s