Package evaluation of Coalescent on Julia 1.13.0-DEV.943 (cce193b1aa*) started at 2025-08-02T19:26:14.105 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.44s ################################################################################ # Installation # Installing Coalescent... Resolving package versions... Installed Bzip2_jll ─────────────────────────── v1.0.9+0 Installed libass_jll ────────────────────────── v0.17.4+0 Installed libaom_jll ────────────────────────── v3.12.1+0 Installed Libuuid_jll ───────────────────────── v2.41.0+0 Installed HarfBuzz_jll ──────────────────────── v8.5.1+0 Installed CommonWorldInvalidations ──────────── v1.0.0 Installed InlineStrings ─────────────────────── v1.4.4 Installed Qt6Base_jll ───────────────────────── v6.8.2+1 Installed MKL_jll ───────────────────────────── v2025.2.0+0 Installed Cairo_jll ─────────────────────────── v1.18.5+0 Installed Libtiff_jll ───────────────────────── v4.7.1+0 Installed PlotThemes ────────────────────────── v3.3.0 Installed SIMDTypes ─────────────────────────── v0.1.0 Installed OrderedCollections ────────────────── v1.8.1 Installed Functors ──────────────────────────── v0.5.2 Installed FastPower ─────────────────────────── v1.1.3 Installed Xorg_libXinerama_jll ──────────────── v1.1.6+0 Installed libinput_jll ──────────────────────── v1.28.1+0 Installed Graphite2_jll ─────────────────────── v1.3.15+0 Installed OrdinaryDiffEqRosenbrock ──────────── v1.12.0 Installed OrdinaryDiffEqExponentialRK ───────── v1.5.0 Installed PreallocationTools ────────────────── v0.4.29 Installed EnzymeCore ────────────────────────── v0.8.12 Installed CpuId ─────────────────────────────── v0.3.1 Installed fzf_jll ───────────────────────────── v0.61.1+0 Installed Fontconfig_jll ────────────────────── v2.16.0+0 Installed OrdinaryDiffEqFIRK ────────────────── v1.13.0 Installed SentinelArrays ────────────────────── v1.4.8 Installed StaticArrayInterface ──────────────── v1.8.0 Installed NonlinearSolveSpectralMethods ─────── v1.2.0 Installed OpenSpecFun_jll ───────────────────── v0.5.6+0 Installed NaNMath ───────────────────────────── v1.1.3 Installed QuadGK ────────────────────────────── v2.11.2 Installed OrdinaryDiffEqQPRK ────────────────── v1.1.0 Installed DiffEqCallbacks ───────────────────── v4.8.0 Installed NonlinearSolveBase ────────────────── v1.13.0 Installed FastBroadcast ─────────────────────── v0.3.5 Installed Opus_jll ──────────────────────────── v1.5.2+0 Installed WoodburyMatrices ──────────────────── v1.0.0 Installed Ogg_jll ───────────────────────────── v1.3.6+0 Installed Xorg_libxcb_jll ───────────────────── v1.17.1+0 Installed EnumX ─────────────────────────────── v1.0.5 Installed Tables ────────────────────────────── v1.12.1 Installed JumpProcesses ─────────────────────── v9.16.1 Installed NLSolversBase ─────────────────────── v7.10.0 Installed LinearSolve ───────────────────────── v3.24.0 Installed OrdinaryDiffEqLowOrderRK ──────────── v1.3.0 Installed Unzip ─────────────────────────────── v0.2.0 Installed Reexport ──────────────────────────── v1.2.2 Installed InverseFunctions ──────────────────── v0.1.17 Installed Jieko ─────────────────────────────── v0.2.1 Installed LZO_jll ───────────────────────────── v2.10.3+0 Installed Preferences ───────────────────────── v1.4.3 Installed Xorg_xcb_util_wm_jll ──────────────── v0.4.2+0 Installed FFMPEG ────────────────────────────── v0.4.4 Installed Static ────────────────────────────── v1.2.0 Installed DiffEqBase ────────────────────────── v6.180.0 Installed BracketingNonlinearSolve ──────────── v1.3.0 Installed Missings ──────────────────────────── v1.2.0 Installed LERC_jll ──────────────────────────── v4.0.1+0 Installed RegistryInstances ─────────────────── v0.1.0 Installed TableTraits ───────────────────────── v1.0.1 Installed NonlinearSolve ────────────────────── v4.10.0 Installed LLVMOpenMP_jll ────────────────────── v18.1.8+0 Installed LaTeXStrings ──────────────────────── v1.4.0 Installed OrdinaryDiffEqNordsieck ───────────── v1.1.0 Installed OrdinaryDiffEqAdamsBashforthMoulton ─ v1.2.0 Installed Crayons ───────────────────────────── v4.1.1 Installed MaybeInplace ──────────────────────── v0.1.4 Installed Xorg_libICE_jll ───────────────────── v1.1.2+0 Installed eudev_jll ─────────────────────────── v3.2.14+0 Installed Grisu ─────────────────────────────── v1.0.2 Installed EpollShim_jll ─────────────────────── v0.0.20230411+1 Installed SortingAlgorithms ─────────────────── v1.2.1 Installed RecursiveArrayTools ───────────────── v3.36.0 Installed Format ────────────────────────────── v1.3.7 Installed OrdinaryDiffEqLinear ──────────────── v1.3.0 Installed UnPack ────────────────────────────── v1.0.2 Installed ADTypes ───────────────────────────── v1.16.0 Installed Inflate ───────────────────────────── v0.1.5 Installed MacroTools ────────────────────────── v0.5.16 Installed DiffResults ───────────────────────── v1.1.0 Installed DataStructures ────────────────────── v0.18.22 Installed URIs ──────────────────────────────── v1.6.1 Installed GenericSchur ──────────────────────── v0.5.5 Installed OpenSSH_jll ───────────────────────── v10.0.1+0 Installed ManualMemory ──────────────────────── v0.1.8 Installed AbstractTrees ─────────────────────── v0.4.5 Installed ArnoldiMethod ─────────────────────── v0.4.0 Installed FillArrays ────────────────────────── v1.13.0 Installed SparseMatrixColorings ─────────────── v0.4.21 Installed UnitfulLatexify ───────────────────── v1.7.0 Installed DelimitedFiles ────────────────────── v1.9.1 Installed oneTBB_jll ────────────────────────── v2022.0.0+0 Installed Xorg_xcb_util_jll ─────────────────── v0.4.1+0 Installed UnicodeFun ────────────────────────── v0.4.1 Installed x264_jll ──────────────────────────── v10164.0.1+0 Installed Xorg_libXau_jll ───────────────────── v1.0.13+0 Installed CodecZlib ─────────────────────────── v0.7.8 Installed StatsBase ─────────────────────────── v0.34.5 Installed ExprTools ─────────────────────────── v0.1.10 Installed ArrayInterface ────────────────────── v7.19.0 Installed Xorg_libXfixes_jll ────────────────── v6.0.1+0 Installed mtdev_jll ─────────────────────────── v1.1.7+0 Installed Qt6ShaderTools_jll ────────────────── v6.8.2+1 Installed IntelOpenMP_jll ───────────────────── v2025.2.0+0 Installed DataValueInterfaces ───────────────── v1.0.0 Installed CommonSubexpressions ──────────────── v0.3.1 Installed LoggingExtras ─────────────────────── v1.1.0 Installed SciMLJacobianOperators ────────────── v0.1.8 Installed LayoutPointers ────────────────────── v0.1.17 Installed Pixman_jll ────────────────────────── v0.44.2+0 Installed Libffi_jll ────────────────────────── v3.4.7+0 Installed Expat_jll ─────────────────────────── v2.6.5+0 Installed IrrationalConstants ───────────────── v0.2.4 Installed libdecor_jll ──────────────────────── v0.2.2+0 Installed ConcreteStructs ───────────────────── v0.2.3 Installed TruncatedStacktraces ──────────────── v1.4.0 Installed Xorg_libXcursor_jll ───────────────── v1.2.4+0 Installed libpng_jll ────────────────────────── v1.6.50+0 Installed GPUArraysCore ─────────────────────── v0.2.0 Installed ColorVectorSpace ──────────────────── v0.11.0 Installed HTTP ──────────────────────────────── v1.10.17 Installed ArrayLayouts ──────────────────────── v1.11.2 Installed StableRNGs ────────────────────────── v1.0.3 Installed SimpleTraits ──────────────────────── v0.9.4 Installed Contour ───────────────────────────── v0.6.3 Installed Xorg_xcb_util_keysyms_jll ─────────── v0.4.1+0 Installed BitFlags ──────────────────────────── v0.1.9 Installed Interpolations ────────────────────── v0.15.1 Installed libfdk_aac_jll ────────────────────── v2.0.4+0 Installed IOCapture ─────────────────────────── v0.2.5 Installed OrdinaryDiffEqRKN ─────────────────── v1.2.0 Installed OrdinaryDiffEqExtrapolation ───────── v1.5.0 Installed OrdinaryDiffEqStabilizedIRK ───────── v1.3.0 Installed Scratch ───────────────────────────── v1.3.0 Installed FFMPEG_jll ────────────────────────── v7.1.1+0 Installed SimpleBufferStream ────────────────── v1.2.0 Installed Setfield ──────────────────────────── v1.1.2 Installed PooledArrays ──────────────────────── v1.4.3 Installed OrdinaryDiffEqPRK ─────────────────── v1.1.0 Installed PDMats ────────────────────────────── v0.11.35 Installed Qt6Declarative_jll ────────────────── v6.8.2+1 Installed WorkerUtilities ───────────────────── v1.6.1 Installed Moshi ─────────────────────────────── v0.3.7 Installed DocStringExtensions ───────────────── v0.9.5 Installed OrdinaryDiffEqHighOrderRK ─────────── v1.2.0 Installed CompositionsBase ──────────────────── v0.1.2 Installed NonlinearSolveQuasiNewton ─────────── v1.7.0 Installed OrdinaryDiffEq ────────────────────── v6.101.0 Installed Plots ─────────────────────────────── v1.40.17 Installed DifferentiationInterface ──────────── v0.7.3 Installed Rmath_jll ─────────────────────────── v0.5.1+0 Installed CommonSolve ───────────────────────── v0.2.4 Installed ForwardDiff ───────────────────────── v1.0.1 Installed SimpleUnPack ──────────────────────── v1.1.0 Installed RelocatableFolders ────────────────── v1.0.1 Installed JLFzf ─────────────────────────────── v0.1.11 Installed AliasTables ───────────────────────── v1.1.3 Installed OrdinaryDiffEqStabilizedRK ────────── v1.2.0 Installed BitTwiddlingConvenienceFunctions ──── v0.1.6 Installed ColorSchemes ──────────────────────── v3.30.0 Installed ConcurrentUtilities ───────────────── v2.5.0 Installed IteratorInterfaceExtensions ───────── v1.0.0 Installed LineSearch ────────────────────────── v0.1.4 Installed RecipesBase ───────────────────────── v1.3.4 Installed FunctionWrappersWrappers ──────────── v0.1.3 Installed Krylov ────────────────────────────── v0.10.1 Installed DataAPI ───────────────────────────── v1.16.0 Installed InvertedIndices ───────────────────── v1.3.1 Installed SciMLOperators ────────────────────── v1.4.0 Installed Xorg_libXi_jll ────────────────────── v1.8.3+0 Installed libevdev_jll ──────────────────────── v1.13.4+0 Installed OrdinaryDiffEqBDF ─────────────────── v1.7.0 Installed OrdinaryDiffEqSymplecticRK ────────── v1.4.0 Installed Wayland_jll ───────────────────────── v1.24.0+0 Installed Colors ────────────────────────────── v0.13.1 Installed SciMLStructures ───────────────────── v1.7.0 Installed Measures ──────────────────────────── v0.3.2 Installed StaticArraysCore ──────────────────── v1.4.3 Installed Xorg_libxkbfile_jll ───────────────── v1.1.3+0 Installed OrdinaryDiffEqLowStorageRK ────────── v1.3.0 Installed FastGaussQuadrature ───────────────── v1.0.2 Installed StaticArrays ──────────────────────── v1.9.14 Installed Documenter ────────────────────────── v1.14.1 Installed Latexify ──────────────────────────── v0.16.8 Installed Libglvnd_jll ──────────────────────── v1.7.1+1 Installed AxisAlgorithms ────────────────────── v1.1.0 Installed Xorg_xkbcomp_jll ──────────────────── v1.4.7+0 Installed Requires ──────────────────────────── v1.3.1 Installed StringManipulation ────────────────── v0.4.1 Installed ColorTypes ────────────────────────── v0.12.1 Installed Glib_jll ──────────────────────────── v2.84.3+0 Installed OrdinaryDiffEqDifferentiation ─────── v1.10.1 Installed FunctionWrappers ──────────────────── v1.1.3 Installed OrdinaryDiffEqNonlinearSolve ──────── v1.11.0 Installed Coalescent ────────────────────────── v0.1.4 Installed LogExpFunctions ───────────────────── v0.3.29 Installed CSV ───────────────────────────────── v0.10.15 Installed DiffRules ─────────────────────────── v1.15.1 Installed Xorg_xcb_util_cursor_jll ──────────── v0.1.5+0 Installed JSON ──────────────────────────────── v0.21.4 Installed Git_jll ───────────────────────────── v2.50.1+0 Installed PrettyTables ──────────────────────── v2.4.0 Installed OrdinaryDiffEqCore ────────────────── v1.26.2 Installed Parsers ───────────────────────────── v2.8.3 Installed Vulkan_Loader_jll ─────────────────── v1.3.243+0 Installed SciMLBase ─────────────────────────── v2.107.0 Installed Distributions ─────────────────────── v0.25.120 Installed FiniteDiff ────────────────────────── v2.27.0 Installed OrdinaryDiffEqExplicitRK ──────────── v1.1.0 Installed FastClosures ──────────────────────── v0.3.2 Installed Rmath ─────────────────────────────── v0.8.0 Installed Xorg_xcb_util_renderutil_jll ──────── v0.3.10+0 Installed Unitful ───────────────────────────── v1.24.0 Installed NonlinearSolveFirstOrder ──────────── v1.6.0 Installed StatsFuns ─────────────────────────── v1.5.0 Installed CloseOpenIntervals ────────────────── v0.1.13 Installed Xorg_xkeyboard_config_jll ─────────── v2.44.0+0 Installed Xorg_libXdmcp_jll ─────────────────── v1.1.6+0 Installed OrdinaryDiffEqIMEXMultistep ───────── v1.4.0 Installed OrdinaryDiffEqFeagin ──────────────── v1.1.0 Installed Polyester ─────────────────────────── v0.7.18 Installed DataFrames ────────────────────────── v1.7.0 Installed Xorg_libSM_jll ────────────────────── v1.2.6+0 Installed WeakRefStrings ────────────────────── v1.4.2 Installed Pango_jll ─────────────────────────── v1.56.3+0 Installed XZ_jll ────────────────────────────── v5.8.1+0 Installed JLLWrappers ───────────────────────── v1.7.1 Installed x265_jll ──────────────────────────── v4.1.0+0 Installed OrdinaryDiffEqSSPRK ───────────────── v1.3.0 Installed OrdinaryDiffEqPDIRK ───────────────── v1.3.1 Installed RecipesPipeline ───────────────────── v0.6.12 Installed OrdinaryDiffEqSDIRK ───────────────── v1.4.0 Installed Xorg_xtrans_jll ───────────────────── v1.6.0+0 Installed ThreadingUtilities ────────────────── v0.5.5 Installed GR_jll ────────────────────────────── v0.73.17+0 Installed Accessors ─────────────────────────── v0.1.42 Installed OrdinaryDiffEqDefault ─────────────── v1.5.0 Installed FilePathsBase ─────────────────────── v0.9.24 Installed Graphs ────────────────────────────── v1.13.0 Installed JpegTurbo_jll ─────────────────────── v3.1.1+0 Installed Dbus_jll ──────────────────────────── v1.16.2+0 Installed OrdinaryDiffEqVerner ──────────────── v1.3.0 Installed Adapt ─────────────────────────────── v4.3.0 Installed ExponentialUtilities ──────────────── v1.27.0 Installed RuntimeGeneratedFunctions ─────────── v0.5.15 Installed ConstructionBase ──────────────────── v1.6.0 Installed HypergeometricFunctions ───────────── v0.3.28 Installed Libmount_jll ──────────────────────── v2.41.0+0 Installed Xorg_libX11_jll ───────────────────── v1.8.12+0 Installed PoissonRandom ─────────────────────── v0.4.5 Installed ExceptionUnwrapping ───────────────── v0.1.11 Installed Compat ────────────────────────────── v4.18.0 Installed SymbolicIndexingInterface ─────────── v0.3.42 Installed TranscodingStreams ────────────────── v0.11.3 Installed StrideArraysCore ──────────────────── v0.5.7 Installed PlotUtils ─────────────────────────── v1.4.3 Installed TensorCore ────────────────────────── v0.1.1 Installed Statistics ────────────────────────── v1.11.1 Installed StatsAPI ──────────────────────────── v1.7.1 Installed LazyArrays ────────────────────────── v2.6.2 Installed ExproniconLite ────────────────────── v0.10.14 Installed PrecompileTools ───────────────────── v1.3.2 Installed StringEncodings ───────────────────── v0.3.7 Installed Xorg_xcb_util_image_jll ───────────── v0.4.1+0 Installed OpenSSL ───────────────────────────── v1.5.0 Installed OffsetArrays ──────────────────────── v1.17.0 Installed MarkdownAST ───────────────────────── v0.1.2 Installed MbedTLS ───────────────────────────── v1.1.9 Installed TimerOutputs ──────────────────────── v0.5.29 Installed ChainRulesCore ────────────────────── v1.25.2 Installed xkbcommon_jll ─────────────────────── v1.9.2+0 Installed Ratios ────────────────────────────── v0.4.5 Installed GettextRuntime_jll ────────────────── v0.22.4+0 Installed CPUSummary ────────────────────────── v0.2.6 Installed FriBidi_jll ───────────────────────── v1.0.17+0 Installed GLFW_jll ──────────────────────────── v3.4.0+2 Installed LazilyInitializedFields ───────────── v1.3.0 Installed YAML ──────────────────────────────── v0.4.14 Installed LAME_jll ──────────────────────────── v3.100.3+0 Installed Xorg_libXrender_jll ───────────────── v0.9.12+0 Installed Parameters ────────────────────────── v0.12.3 Installed IfElse ────────────────────────────── v0.1.1 Installed libvorbis_jll ─────────────────────── v1.3.8+0 Installed PtrArrays ─────────────────────────── v1.3.0 Installed Git ───────────────────────────────── v1.4.0 Installed MuladdMacro ───────────────────────── v0.2.4 Installed FixedPointNumbers ─────────────────── v0.8.5 Installed Showoff ───────────────────────────── v1.0.3 Installed SpecialFunctions ──────────────────── v2.5.1 Installed FreeType2_jll ─────────────────────── v2.13.4+0 Installed Libiconv_jll ──────────────────────── v1.18.0+0 Installed SimpleNonlinearSolve ──────────────── v2.7.0 Installed MbedTLS_jll ───────────────────────── v2.28.6+2 Installed Xorg_libXext_jll ──────────────────── v1.3.7+0 Installed LineSearches ──────────────────────── v7.4.0 Installed OrdinaryDiffEqTsit5 ───────────────── v1.2.0 Installed Xorg_libXrandr_jll ────────────────── v1.5.5+0 Installed Qt6Wayland_jll ────────────────────── v6.8.2+1 Installed OrdinaryDiffEqFunctionMap ─────────── v1.2.0 Installed ANSIColoredPrinters ───────────────── v0.0.1 Installed PolyesterWeave ────────────────────── v0.2.2 Installed GR ────────────────────────────────── v0.73.17 Installing 79 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact Vulkan_Loader 177.3 KiB Installed artifact Bzip2 503.5 KiB Installed artifact LAME 292.5 KiB Installed artifact Graphite2 120.2 KiB Installed artifact JpegTurbo 1.6 MiB Installed artifact Cairo 2.2 MiB Installed artifact eudev 3.9 MiB Installed artifact Ogg 250.3 KiB Installed artifact HarfBuzz 1.7 MiB Installed artifact libinput 1.0 MiB Installed artifact Xorg_libXi 1.6 MiB Installed artifact Dbus 489.8 KiB Installed artifact Xorg_libXdmcp 67.7 KiB Installed artifact libfdk_aac 2.8 MiB Installed artifact Libmount 6.4 MiB Installed artifact Wayland 390.6 KiB Installed artifact Xorg_libXrender 435.9 KiB Installed artifact xkbcommon 263.7 KiB Installed artifact Xorg_libXrandr 354.5 KiB Installed artifact Libglvnd 833.5 KiB Installed artifact Xorg_libXext 699.9 KiB Installed artifact Xorg_xkbcomp 274.8 KiB Installed artifact Pango 1.1 MiB Installed artifact Libffi 44.2 KiB Installed artifact XZ 1.5 MiB Installed artifact Xorg_xcb_util_renderutil 32.1 KiB Installed artifact Xorg_xcb_util_cursor 56.8 KiB Installed artifact Xorg_xcb_util_wm 147.9 KiB Installed artifact Glib 7.7 MiB Installed artifact Xorg_libxcb 2.1 MiB Installed artifact Qt6Wayland 2.2 MiB Installed artifact Xorg_xcb_util 39.5 KiB Installed artifact libaom 6.4 MiB Installed artifact FFMPEG 11.4 MiB Installed artifact mtdev 79.6 KiB Installed artifact libass 427.8 KiB Installed artifact Xorg_xcb_util_keysyms 17.8 KiB Installed artifact Xorg_libXinerama 50.1 KiB Installed artifact LLVMOpenMP 661.6 KiB Installed artifact libevdev 117.1 KiB Installed artifact FreeType2 1.5 MiB Installed artifact oneTBB 435.6 KiB Installed artifact Xorg_libXfixes 195.9 KiB Installed artifact Libiconv 1.9 MiB Installed artifact Libuuid 3.5 MiB Installed artifact Rmath 121.9 KiB Installed artifact Xorg_libxkbfile 486.7 KiB Installed artifact Pixman 372.2 KiB Installed artifact Opus 925.5 KiB Installed artifact FriBidi 78.9 KiB Installed artifact LERC 272.9 KiB Installed artifact Xorg_xkeyboard_config 537.5 KiB Installed artifact GettextRuntime 543.0 KiB Installed artifact Xorg_xtrans 48.2 KiB Installed artifact Xorg_xcb_util_image 54.3 KiB Installed artifact MbedTLS 2.1 MiB Installed artifact x265 1.4 MiB Installed artifact Git 48.8 MiB Installed artifact Xorg_libXau 36.6 KiB Installed artifact Xorg_libSM 164.1 KiB Installed artifact x264 2.1 MiB Installed artifact GLFW 180.1 KiB Installed artifact Qt6ShaderTools 2.1 MiB Installed artifact GR 16.2 MiB Installed artifact Fontconfig 522.5 KiB Installed artifact Libtiff 3.2 MiB Installed artifact libdecor 44.1 KiB Installed artifact fzf 3.3 MiB Installed artifact libpng 328.4 KiB Installed artifact LZO 208.9 KiB Installed artifact libvorbis 271.0 KiB Installed artifact Xorg_libICE 384.9 KiB Installed artifact Expat 271.4 KiB Installed artifact OpenSSH 4.2 MiB Installed artifact Xorg_libXcursor 227.1 KiB Installed artifact Qt6Base 20.6 MiB Installed artifact Xorg_libX11 13.9 MiB Installed artifact Qt6Declarative 21.6 MiB Updating `~/.julia/environments/v1.13/Project.toml` [7af52d38] + Coalescent v0.1.4 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.16.0 [a4c015fc] + ANSIColoredPrinters v0.0.1 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.19.0 [4c555306] + ArrayLayouts v1.11.2 [13072b0f] + AxisAlgorithms v1.1.0 [d1d4a3ce] + BitFlags v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] + BracketingNonlinearSolve v1.3.0 [2a0fbf3d] + CPUSummary v0.2.6 [336ed68f] + CSV v0.10.15 [d360d2e6] + ChainRulesCore v1.25.2 [fb6a15b2] + CloseOpenIntervals v0.1.13 [7af52d38] + Coalescent v0.1.4 [944b1d66] + CodecZlib 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To see why use `status --outdated -m` Installation completed after 40.1s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4476.0 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 26 already precompiled. Precompiling package dependencies... ERROR: LoadError: The following 2 direct dependencies failed to precompile: Coalescent Failed to precompile Coalescent [7af52d38-510f-42b9-ba0a-b0cde7e92322] to "/home/pkgeval/.julia/compiled/v1.13/Coalescent/jl_ZPwD80" (ProcessExited(1)). ERROR: LoadError: UndefVarError: `MKL_jll` not defined in `LinearSolve` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ ~/.julia/packages/LinearSolve/rPXiC/src/mkl.jl:11 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [3] top-level scope @ ~/.julia/packages/LinearSolve/rPXiC/src/LinearSolve.jl:160 [4] include(mod::Module, _path::String) @ Base ./Base.jl:311 [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3002 [6] top-level scope @ stdin:5 [7] eval(m::Module, e::Any) @ Core ./boot.jl:489 [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [9] include_string @ ./loading.jl:2858 [inlined] [10] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [11] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/LinearSolve/rPXiC/src/mkl.jl:11 in expression starting at /home/pkgeval/.julia/packages/LinearSolve/rPXiC/src/LinearSolve.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile LinearSolve [7ed4a6bd-45f5-4d41-b270-4a48e9bafcae] to "/home/pkgeval/.julia/compiled/v1.13/LinearSolve/jl_EmR4AU" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3289 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3167 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2654 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#235 @ ./reflection.jl:1333 [inlined] [9] invokelatest_gr @ ./reflection.jl:1325 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3860 [11] maybe_cachefile_lock @ ./loading.jl:3857 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2640 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2468 [14] macro expansion @ ./loading.jl:2396 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2360 [17] require @ ./loading.jl:2336 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr) @ Base ./module.jl:111 [20] top-level scope @ ~/.julia/packages/OrdinaryDiffEqDifferentiation/I5Bk2/src/OrdinaryDiffEqDifferentiation.jl:8 [21] include(mod::Module, _path::String) @ Base ./Base.jl:311 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3002 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [26] include_string @ ./loading.jl:2858 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [28] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/OrdinaryDiffEqDifferentiation/I5Bk2/src/OrdinaryDiffEqDifferentiation.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile OrdinaryDiffEqDifferentiation [4302a76b-040a-498a-8c04-15b101fed76b] to "/home/pkgeval/.julia/compiled/v1.13/OrdinaryDiffEqDifferentiation/jl_HmYWKX" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3289 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3167 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2654 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#235 @ ./reflection.jl:1333 [inlined] [9] invokelatest_gr @ ./reflection.jl:1325 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3860 [11] maybe_cachefile_lock @ ./loading.jl:3857 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2640 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2468 [14] macro expansion @ ./loading.jl:2396 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2360 [17] require @ ./loading.jl:2336 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr) @ Base ./module.jl:111 [20] top-level scope @ ~/.julia/packages/OrdinaryDiffEq/Hdbut/src/OrdinaryDiffEq.jl:68 [21] include(mod::Module, _path::String) @ Base ./Base.jl:311 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3002 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [26] include_string @ ./loading.jl:2858 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [28] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/OrdinaryDiffEq/Hdbut/src/OrdinaryDiffEq.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile OrdinaryDiffEq [1dea7af3-3e70-54e6-95c3-0bf5283fa5ed] to "/home/pkgeval/.julia/compiled/v1.13/OrdinaryDiffEq/jl_CJOiKn" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3289 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3167 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2654 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#235 @ ./reflection.jl:1333 [inlined] [9] invokelatest_gr @ ./reflection.jl:1325 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3860 [11] maybe_cachefile_lock @ ./loading.jl:3857 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2640 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2468 [14] macro expansion @ ./loading.jl:2396 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2360 [17] require @ ./loading.jl:2336 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/Coalescent/g4isB/src/Coalescent.jl:23 [22] include(mod::Module, _path::String) @ Base ./Base.jl:311 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3002 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [27] include_string @ ./loading.jl:2858 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [29] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/Coalescent/g4isB/src/Coalescent.jl:1 in expression starting at stdin:5 OrdinaryDiffEq Failed to precompile OrdinaryDiffEq [1dea7af3-3e70-54e6-95c3-0bf5283fa5ed] to "/home/pkgeval/.julia/compiled/v1.13/OrdinaryDiffEq/jl_Vn6viw" (ProcessExited(1)). ERROR: LoadError: UndefVarError: `MKL_jll` not defined in `LinearSolve` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ ~/.julia/packages/LinearSolve/rPXiC/src/mkl.jl:11 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [3] top-level scope @ ~/.julia/packages/LinearSolve/rPXiC/src/LinearSolve.jl:160 [4] include(mod::Module, _path::String) @ Base ./Base.jl:311 [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3002 [6] top-level scope @ stdin:5 [7] eval(m::Module, e::Any) @ Core ./boot.jl:489 [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [9] include_string @ ./loading.jl:2858 [inlined] [10] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [11] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/LinearSolve/rPXiC/src/mkl.jl:11 in expression starting at /home/pkgeval/.julia/packages/LinearSolve/rPXiC/src/LinearSolve.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile LinearSolve [7ed4a6bd-45f5-4d41-b270-4a48e9bafcae] to "/home/pkgeval/.julia/compiled/v1.13/LinearSolve/jl_F3lG3B" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3289 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3167 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2654 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#235 @ ./reflection.jl:1333 [inlined] [9] invokelatest_gr @ ./reflection.jl:1325 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3860 [11] maybe_cachefile_lock @ ./loading.jl:3857 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2640 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2468 [14] macro expansion @ ./loading.jl:2396 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2360 [17] require @ ./loading.jl:2336 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr) @ Base ./module.jl:111 [20] top-level scope @ ~/.julia/packages/OrdinaryDiffEqDifferentiation/I5Bk2/src/OrdinaryDiffEqDifferentiation.jl:8 [21] include(mod::Module, _path::String) @ Base ./Base.jl:311 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3002 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [26] include_string @ ./loading.jl:2858 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [28] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/OrdinaryDiffEqDifferentiation/I5Bk2/src/OrdinaryDiffEqDifferentiation.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile OrdinaryDiffEqDifferentiation [4302a76b-040a-498a-8c04-15b101fed76b] to "/home/pkgeval/.julia/compiled/v1.13/OrdinaryDiffEqDifferentiation/jl_wx14T9" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3289 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3167 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2654 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#235 @ ./reflection.jl:1333 [inlined] [9] invokelatest_gr @ ./reflection.jl:1325 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3860 [11] maybe_cachefile_lock @ ./loading.jl:3857 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2640 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2468 [14] macro expansion @ ./loading.jl:2396 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2360 [17] require @ ./loading.jl:2336 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr) @ Base ./module.jl:111 [20] top-level scope @ ~/.julia/packages/OrdinaryDiffEq/Hdbut/src/OrdinaryDiffEq.jl:68 [21] include(mod::Module, _path::String) @ Base ./Base.jl:311 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3002 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [26] include_string @ ./loading.jl:2858 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [28] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/OrdinaryDiffEq/Hdbut/src/OrdinaryDiffEq.jl:1 in expression starting at stdin:5 in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 2101.69s ################################################################################ # Testing # Testing Coalescent Status `/tmp/jl_TJUGMx/Project.toml` [336ed68f] CSV v0.10.15 [7af52d38] Coalescent v0.1.4 [a93c6f00] DataFrames v1.7.0 [31c24e10] Distributions v0.25.120 [e30172f5] Documenter v1.14.1 ⌅ [a98d9a8b] Interpolations v0.15.1 [ccbc3e58] JumpProcesses v9.16.1 [1914dd2f] MacroTools v0.5.16 [1dea7af3] OrdinaryDiffEq v6.101.0 [91a5bcdd] Plots v1.40.17 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.5 [ddb6d928] YAML v0.4.14 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_TJUGMx/Manifest.toml` [47edcb42] ADTypes v1.16.0 [a4c015fc] ANSIColoredPrinters v0.0.1 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.19.0 [4c555306] ArrayLayouts v1.11.2 [13072b0f] AxisAlgorithms v1.1.0 [d1d4a3ce] BitFlags v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] BracketingNonlinearSolve v1.3.0 [2a0fbf3d] CPUSummary v0.2.6 [336ed68f] CSV v0.10.15 [d360d2e6] ChainRulesCore v1.25.2 [fb6a15b2] CloseOpenIntervals v0.1.13 [7af52d38] Coalescent v0.1.4 [944b1d66] CodecZlib v0.7.8 [35d6a980] ColorSchemes v3.30.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.0 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.6.0 [d38c429a] Contour v0.6.3 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [2b5f629d] DiffEqBase v6.180.0 [459566f4] DiffEqCallbacks v4.8.0 [163ba53b] DiffResults 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v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.7.15 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.1+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... ✗ LinearSolve ✗ LinearSolve → LinearSolveSparseArraysExt ✗ LinearSolve → LinearSolveEnzymeExt ✗ LinearSolve → LinearSolveForwardDiffExt ✗ NonlinearSolveBase → NonlinearSolveBaseLinearSolveExt ✗ OrdinaryDiffEqDifferentiation ✗ NonlinearSolveFirstOrder ✗ NonlinearSolveQuasiNewton ✗ OrdinaryDiffEqExponentialRK ✗ OrdinaryDiffEqExtrapolation ✗ OrdinaryDiffEqRosenbrock ✗ NonlinearSolveQuasiNewton → NonlinearSolveQuasiNewtonForwardDiffExt ✗ NonlinearSolve ✗ OrdinaryDiffEqNonlinearSolve ✗ OrdinaryDiffEqSDIRK ✗ OrdinaryDiffEqStabilizedIRK ✗ OrdinaryDiffEqIMEXMultistep ✗ OrdinaryDiffEqPDIRK ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 2161 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_70978.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007a3c62d1cf10 Total snapshots: 434. Utilization: 0% ╎434 @Base/task.jl:1129 wait_forever() 433╎ 434 @Base/task.jl:1192 wait() ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_70978.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007b9e2e240c40 Total snapshots: 470. Utilization: 0% ╎470 @Base/task.jl:1129 wait_forever() 469╎ 470 @Base/task.jl:1192 wait() [2161] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/Coalescent/g4isB/test/runtests.jl:1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_70978.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 2292111 (Pool: 2291809; Big: 302); GC: 4 PkgEval terminated after 2732.17s: test duration exceeded the time limit