Package evaluation to load DiscoveryGraph on Julia 1.14.0-DEV.2114 (cccbcd9611*) started at 2026-05-05T15:10:14.287


################################################################################
# Set-up
#


Set-up completed after 0.13s


################################################################################
# Installation
#

Installing DiscoveryGraph...
   Resolving package versions...
    Updating `~/.julia/environments/v1.14/Project.toml`
  [6c26c9e7] + DiscoveryGraph v0.3.0
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [66dad0bd] + AliasTables v1.1.3
  [dce04be8] + ArgCheck v2.5.0
  [ec485272] + ArnoldiMethod v0.4.0
  [69666777] + Arrow v2.8.1
  [31f734f8] + ArrowTypes v2.3.0
  [c3b6d118] + BitIntegers v0.3.7
  [6309b1aa] + CodecInflate64 v0.1.3
  [5ba52731] + CodecLz4 v0.4.6
  [944b1d66] + CodecZlib v0.7.8
  [6b39b394] + CodecZstd v0.8.7
  [34da2185] + Compat v4.18.1
  [f0e56b4a] + ConcurrentUtilities v2.5.1
  [992eb4ea] + CondaPkg v0.2.34
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [a93c6f00] + DataFrames v1.8.2
  [864edb3b] + DataStructures v0.19.4
  [e2d170a0] + DataValueInterfaces v1.0.0
  [6c26c9e7] + DiscoveryGraph v0.3.0
  [ffbed154] + DocStringExtensions v0.9.5
  [4e289a0a] + EnumX v1.0.7
  [e2ba6199] + ExprTools v0.1.10
  [8f5d6c58] + EzXML v1.2.3
  [86223c79] + Graphs v1.14.0
  [d25df0c9] + Inflate v0.1.5
  [842dd82b] + InlineStrings v1.4.5
  [0c81fc1b] + InputBuffers v1.1.1
  [41ab1584] + InvertedIndices v1.3.1
  [92d709cd] + IrrationalConstants v0.2.6
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.1
  [682c06a0] + JSON v1.5.2
  [b964fa9f] + LaTeXStrings v1.4.0
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [1914dd2f] + MacroTools v0.5.16
  [0b3b1443] + MicroMamba v0.1.15
  [e1d29d7a] + Missings v1.2.0
  [78c3b35d] + Mocking v0.8.1
  [bac558e1] + OrderedCollections v1.8.1
  [69de0a69] + Parsers v2.8.4
  [fa939f87] + Pidfile v1.3.0
  [2dfb63ee] + PooledArrays v1.4.3
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.2
  [08abe8d2] + PrettyTables v3.3.2
  [43287f4e] + PtrArrays v1.4.0
  [6099a3de] + PythonCall v0.9.31
  [189a3867] + Reexport v1.2.2
  [6c6a2e73] + Scratch v1.3.0
  [91c51154] + SentinelArrays v1.4.9
  [699a6c99] + SimpleTraits v0.9.5
  [47aef6b3] + SimpleWeightedGraphs v1.5.1
  [a2af1166] + SortingAlgorithms v1.2.2
  [90137ffa] + StaticArrays v1.9.18
  [1e83bf80] + StaticArraysCore v1.4.4
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.8.0
  [2913bbd2] + StatsBase v0.34.10
  [892a3eda] + StringManipulation v0.4.4
  [354b36f9] + StringViews v1.3.7
  [ec057cc2] + StructUtils v2.8.1
  [dc5dba14] + TZJData v1.5.0+2025b
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
  [f269a46b] + TimeZones v1.22.2
  [3bb67fe8] + TranscodingStreams v0.11.3
  [e17b2a0c] + UnsafePointers v1.0.0
⌅ [fdbf4ff8] + XLSX v0.10.4
  [49080126] + ZipArchives v2.6.0
  [a5390f91] + ZipFile v0.10.1
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [5ced341a] + Lz4_jll v1.10.1+0
  [02c8fc9c] + XML2_jll v2.15.1+0
  [f8abcde7] + micromamba_jll v2.3.1+0
  [4d7b5844] + pixi_jll v0.41.3+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v1.0.0
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.14.0
  [de0858da] + Printf v1.11.0
  [3fa0cd96] + REPL v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.0.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.13.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.5.1+0
  [deac9b47] + LibCURL_jll v8.19.0+0
  [e37daf67] + LibGit2_jll v1.9.2+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2026.3.19
  [4536629a] + OpenBLAS_jll v0.3.33+0
  [458c3c95] + OpenSSL_jll v3.5.6+0
  [efcefdf7] + PCRE2_jll v10.47.0+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.2+0
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.15.0+0
  [8e850ede] + nghttp2_jll v1.69.0+0
  [3f19e933] + p7zip_jll v17.8.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 9.48s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...
     Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml`
    Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml`

Precompiling package dependencies...
Precompiling project...
ERROR: LoadError: InitError: UndefVarError: `manifest_uuid_path` not defined in `Base`
Suggestion: check for spelling errors or missing imports.
Stacktrace:
  [1] getproperty(x::Module, f::Symbol)
    @ Base ./Base_compiler.jl:51
  [2] _resolve_top_env(load_path::Any)
    @ CondaPkg ~/.julia/packages/CondaPkg/8GjrP/src/resolve.jl:10
  [3] resolve(; force::Bool, io::IO, interactive::Bool, dry_run::Bool)
    @ CondaPkg ~/.julia/packages/CondaPkg/8GjrP/src/resolve.jl:823
  [4] resolve()
    @ CondaPkg ~/.julia/packages/CondaPkg/8GjrP/src/resolve.jl:796
  [5] envdir()
    @ CondaPkg ~/.julia/packages/CondaPkg/8GjrP/src/env.jl:70
  [6] init_context()
    @ PythonCall.C ~/.julia/packages/PythonCall/83z4q/src/C/context.jl:135
  [7] __init__()
    @ PythonCall.C ~/.julia/packages/PythonCall/83z4q/src/C/C.jl:26
  [8] run_module_init(mod::Module, i::Int64)
    @ Base ./loading.jl:1605
  [9] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)
    @ Base ./loading.jl:1593
 [10] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool)
    @ Base ./loading.jl:1481
 [11] _include_from_serialized
    @ ./loading.jl:1438 [inlined]
 [12] _require_search_from_serialized(pkg::Base.PkgId, sourcespec::Base.PkgLoadSpec, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})
    @ Base ./loading.jl:2283
 [13] !=(x::Int8, y::Int64)
    @ Base ./loading.jl:2178 [inlined]
 [14] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2811
 [15] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2672
 [16] macro expansion
    @ ./loading.jl:2599 [inlined]
 [17] String(s::Symbol)
    @ Base ./lock.jl:376 [inlined]
 [18] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2563
 [19] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2539 [inlined]
 [20] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)
    @ Base ./module.jl:36 [inlined]
 [21] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [22] _eval_using(to::Module, path::Expr, flags::UInt8)
    @ Base ./module.jl:137 [inlined]
 [23] top-level scope
    @ ~/.julia/packages/DiscoveryGraph/lusKv/src/DiscoveryGraph.jl:9
 [24] include(mod::Module, _path::String)
    @ Base ./Base.jl:326
 [25] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3271
 [26] top-level scope
    @ stdin:5
 [27] eval(m::Module, e::Any)
    @ Core ./boot.jl:517
 [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3113
 [29] materialize(bc::Base.Broadcast.Broadcasted{Base.Broadcast.DefaultArrayStyle{1}, Nothing, Type{Symbol}, Tuple{Vector{SubString{String}}}})
    @ Base.Broadcast ./loading.jl:3123 [inlined]
 [30] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:350
 [31] _start()
    @ Base ./client.jl:593
during initialization of module C
in expression starting at /home/pkgeval/.julia/packages/DiscoveryGraph/lusKv/src/DiscoveryGraph.jl:1
in expression starting at stdin:5
              ✗ DiscoveryGraph

Precompilation completed after 43.87s


################################################################################
# Loading
#

Loading DiscoveryGraph...
ERROR: LoadError: InitError: UndefVarError: `manifest_uuid_path` not defined in `Base`
Suggestion: check for spelling errors or missing imports.
Stacktrace:
  [1] getproperty(x::Module, f::Symbol)
    @ Base ./Base_compiler.jl:51
  [2] _resolve_top_env(load_path::Any)
    @ CondaPkg ~/.julia/packages/CondaPkg/8GjrP/src/resolve.jl:10
  [3] resolve(; force::Bool, io::IO, interactive::Bool, dry_run::Bool)
    @ CondaPkg ~/.julia/packages/CondaPkg/8GjrP/src/resolve.jl:823
  [4] resolve()
    @ CondaPkg ~/.julia/packages/CondaPkg/8GjrP/src/resolve.jl:796
  [5] envdir()
    @ CondaPkg ~/.julia/packages/CondaPkg/8GjrP/src/env.jl:70
  [6] init_context()
    @ PythonCall.C ~/.julia/packages/PythonCall/83z4q/src/C/context.jl:135
  [7] __init__()
    @ PythonCall.C ~/.julia/packages/PythonCall/83z4q/src/C/C.jl:26
  [8] run_module_init(mod::Module, i::Int64)
    @ Base ./loading.jl:1605
  [9] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)
    @ Base ./loading.jl:1593
 [10] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool)
    @ Base ./loading.jl:1481
 [11] _include_from_serialized
    @ ./loading.jl:1438 [inlined]
 [12] _require_search_from_serialized(pkg::Base.PkgId, sourcespec::Base.PkgLoadSpec, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})
    @ Base ./loading.jl:2283
 [13] !=(x::Int8, y::Int64)
    @ Base ./loading.jl:2178 [inlined]
 [14] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2811
 [15] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2672
 [16] macro expansion
    @ ./loading.jl:2599 [inlined]
 [17] String(s::Symbol)
    @ Base ./lock.jl:376 [inlined]
 [18] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2563
 [19] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2539 [inlined]
 [20] eval_import_path(at::Module, from::Nothing, path::Expr, keyword::String)
    @ Base ./module.jl:36 [inlined]
 [21] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [22] _eval_using(to::Module, path::Expr, flags::UInt8)
    @ Base ./module.jl:137 [inlined]
 [23] top-level scope
    @ ~/.julia/packages/DiscoveryGraph/lusKv/src/DiscoveryGraph.jl:9
 [24] include(mod::Module, _path::String)
    @ Base ./Base.jl:326
 [25] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3271
 [26] top-level scope
    @ stdin:5
 [27] eval(m::Module, e::Any)
    @ Core ./boot.jl:517
 [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3113
 [29] materialize(bc::Base.Broadcast.Broadcasted{Base.Broadcast.DefaultArrayStyle{1}, Nothing, Type{Symbol}, Tuple{Vector{SubString{String}}}})
    @ Base.Broadcast ./loading.jl:3123 [inlined]
 [30] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:350
 [31] _start()
    @ Base ./client.jl:593
during initialization of module C
in expression starting at /home/pkgeval/.julia/packages/DiscoveryGraph/lusKv/src/DiscoveryGraph.jl:1
in expression starting at stdin:5
  1 dependency had output during precompilation:
┌ DiscoveryGraph
│  [Output was shown above]
└  
ERROR: The following 1 package failed to precompile:

DiscoveryGraph 
Failed to precompile DiscoveryGraph [6c26c9e7-0ef1-44eb-bb5c-4a6256936300] to "/home/pkgeval/.julia/compiled/v1.14/DiscoveryGraph/jl_fft3Sv" (ProcessExited(1)).


Loading failed after 34.82s

ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --check-bounds=yes --pkgimages=existing -e 'using DiscoveryGraph'`, ProcessExited(1)) [1]

Stacktrace:
 [1] spawn_opts_inherit()
   @ Base ./process.jl:612 [inlined]
 [2] run(::Cmd; wait::Bool)
   @ Base ./process.jl:525
 [3] run(::Cmd)
   @ Base ./process.jl:522
 [4] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:197
 [5] include(mod::Module, _path::String)
   @ Base ./Base.jl:326
 [6] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:352
 [7] _start()
   @ Base ./client.jl:593
in expression starting at /PkgEval.jl/scripts/evaluate.jl:188

PkgEval failed after 108.52s: package fails to precompile