Package evaluation to test Climatology on Julia 1.12.6 (15346901f00) started at 2026-06-29T12:16:40.290


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.12`

Set-up completed after 6.21s


################################################################################
# Installation
#

Installing Climatology...
   Resolving package versions...
    Updating `~/.julia/environments/v1.12/Project.toml`
  [9e9a4d37] + Climatology v0.5.19
    Updating `~/.julia/environments/v1.12/Manifest.toml`
  [1520ce14] + AbstractTrees v0.4.5
  [7d9f7c33] + Accessors v0.1.45
  [79e6a3ab] + Adapt v4.7.0
  [3dfee02d] + AirSeaFluxes v0.1.4
  [66dad0bd] + AliasTables v1.1.3
  [13072b0f] + AxisAlgorithms v1.1.0
  [d1d4a3ce] + BitFlags v0.1.10
  [179af706] + CFTime v0.2.10
  [336ed68f] + CSV v0.10.16
  [81a5f4ea] + CatViews v1.0.0
  [d360d2e6] + ChainRulesCore v1.26.1
  [0b6fb165] + ChunkCodecCore v1.0.1
  [4c0bbee4] + ChunkCodecLibZlib v1.0.0
  [55437552] + ChunkCodecLibZstd v1.0.0
  [9e9a4d37] + Climatology v0.5.19
  [944b1d66] + CodecZlib v0.7.8
  [38540f10] + CommonSolve v0.2.9
  [34da2185] + Compat v4.18.1
  [a33af91c] + CompositionsBase v0.1.2
  [f0e56b4a] + ConcurrentUtilities v2.5.1
  [187b0558] + ConstructionBase v1.6.0
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [124859b0] + DataDeps v0.7.14
  [a93c6f00] + DataFrames v1.8.2
  [864edb3b] + DataStructures v0.19.6
  [e2d170a0] + DataValueInterfaces v1.0.0
  [9c0b9be8] + Dataverse v0.2.7
  [39dd38d3] + Dierckx v0.5.4
  [b4f34e82] + Distances v0.10.12
  [31c24e10] + Distributions v0.25.129
  [ffbed154] + DocStringExtensions v0.9.5
  [460bff9d] + ExceptionUnwrapping v0.1.11
  [411431e0] + Extents v0.1.6
  [5789e2e9] + FileIO v1.19.0
  [48062228] + FilePathsBase v0.9.24
  [1a297f60] + FillArrays v1.16.0
  [38e38edf] + GLM v1.9.5
  [68eda718] + GeoFormatTypes v0.4.5
  [cf35fbd7] + GeoInterface v1.6.1
  [61d90e0f] + GeoJSON v0.8.4
  [c27321d9] + Glob v1.5.0
⌅ [cd3eb016] + HTTP v1.11.0
  [076d061b] + HashArrayMappedTries v0.2.0
  [34004b35] + HypergeometricFunctions v0.3.28
  [842dd82b] + InlineStrings v1.4.5
  [a98d9a8b] + Interpolations v0.16.3
  [3587e190] + InverseFunctions v0.1.17
  [41ab1584] + InvertedIndices v1.3.1
  [92d709cd] + IrrationalConstants v0.2.6
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [033835bb] + JLD2 v0.6.4
  [692b3bcd] + JLLWrappers v1.8.0
⌅ [682c06a0] + JSON v0.21.4
  [0f8b85d8] + JSON3 v1.14.3
  [8e2b3108] + KahanSummation v0.3.1
  [8ac3fa9e] + LRUCache v1.6.2
  [b964fa9f] + LaTeXStrings v1.4.0
  [2ab3a3ac] + LogExpFunctions v1.0.1
  [e6f89c97] + LoggingExtras v1.2.0
  [1914dd2f] + MacroTools v0.5.16
  [739be429] + MbedTLS v1.1.10
  [cb8c808f] + MeshArrays v0.5.6
  [e1d29d7a] + Missings v1.2.0
  [b8a86587] + NearestNeighbors v0.4.27
  [6fe1bfb0] + OffsetArrays v1.17.0
  [4d8831e6] + OpenSSL v1.6.1
⌅ [bac558e1] + OrderedCollections v1.8.2
  [90014a1f] + PDMats v0.11.40
  [69de0a69] + Parsers v2.8.6
  [2dfb63ee] + PooledArrays v1.4.3
  [aea7be01] + PrecompileTools v1.3.4
  [21216c6a] + Preferences v1.5.2
  [08abe8d2] + PrettyTables v3.3.2
  [43287f4e] + PtrArrays v1.4.0
  [1fd47b50] + QuadGK v2.11.3
  [c84ed2f1] + Ratios v0.4.5
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [79098fc4] + Rmath v0.9.0
  [b0e4dd01] + RollingFunctions v0.8.1
  [f2b01f46] + Roots v3.0.0
  [08e62803] + STAC v0.1.5
  [7e506255] + ScopedValues v1.6.2
  [6c6a2e73] + Scratch v1.3.0
  [91c51154] + SentinelArrays v1.4.10
  [1277b4bf] + ShiftedArrays v2.0.0
  [777ac1f9] + SimpleBufferStream v1.2.0
  [a2af1166] + SortingAlgorithms v1.2.3
  [276daf66] + SpecialFunctions v2.8.0
  [90137ffa] + StaticArrays v1.9.18
  [1e83bf80] + StaticArraysCore v1.4.4
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.8.0
  [2913bbd2] + StatsBase v0.34.12
  [4c63d2b9] + StatsFuns v2.2.0
  [3eaba693] + StatsModels v0.7.10
  [892a3eda] + StringManipulation v0.4.4
  [856f2bd8] + StructTypes v1.11.0
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.13.0
  [3bb67fe8] + TranscodingStreams v0.11.3
  [5c2747f8] + URIs v1.6.1
  [1986cc42] + Unitful v1.28.0
  [ea10d353] + WeakRefStrings v1.4.3
  [efce3f68] + WoodburyMatrices v1.1.0
  [76eceee3] + WorkerUtilities v1.6.1
  [a5390f91] + ZipFile v0.10.1
  [cd4c43a9] + Dierckx_jll v0.2.0+0
  [c8ffd9c3] + MbedTLS_jll v2.28.1010+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [3161d3a3] + Zstd_jll v1.5.7+1
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.12.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.12.1
  [de0858da] + Printf v1.11.0
  [3fa0cd96] + REPL v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [1a1011a3] + SharedArrays v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.12.0
  [f489334b] + StyledStrings v1.11.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.15.0+0
  [e37daf67] + LibGit2_jll v1.9.0+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.11.4
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [458c3c95] + OpenSSL_jll v3.5.4+0
  [bea87d4a] + SuiteSparse_jll v7.8.3+2
  [83775a58] + Zlib_jll v1.3.1+2
  [8e850b90] + libblastrampoline_jll v5.15.0+0
  [8e850ede] + nghttp2_jll v1.64.0+1
  [3f19e933] + p7zip_jll v17.7.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 6.4s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...
Precompiling packages...
   2218.7 ms  ✓ Contour
    849.0 ms  ✓ TriplotBase
   1012.0 ms  ✓ FortranFiles
   1384.2 ms  ✓ SignedDistanceFields
   3096.0 ms  ✓ CommonDataModel
   1254.1 ms  ✓ Animations
   4097.4 ms  ✓ ComputePipeline
    745.7 ms  ✓ CatViews
   1216.7 ms  ✓ Dierckx_jll
   1220.3 ms  ✓ isoband_jll
   2302.9 ms  ✓ FFTA
  23992.8 ms  ✓ PlotUtils
   1501.5 ms  ✓ FilePaths
  11469.3 ms  ✓ GridLayoutBase
   2125.4 ms  ✓ Packing
   7200.8 ms  ✓ ShaderAbstractions
   1775.5 ms  ✓ ColorBrewer
 119221.2 ms  ✓ Dataverse
   1315.8 ms  ✓ IntervalArithmetic → IntervalArithmeticSparseArraysExt
    906.1 ms  ✓ IntervalArithmetic → IntervalArithmeticIntervalSetsExt
   1081.1 ms  ✓ IntervalArithmetic → IntervalArithmeticIrrationalConstantsExt
   6178.9 ms  ✓ STAC
  22272.1 ms  ✓ MathTeXEngine
   7121.3 ms  ✓ ExactPredicates
  11127.3 ms  ✓ StatsModels
  16848.6 ms  ✓ NCDatasets
   6781.3 ms  ✓ MeshArrays
   1377.9 ms  ✓ Dierckx
    859.2 ms  ✓ Isoband
  31036.7 ms  ✓ KernelDensity
   1067.1 ms  ✓ FilePaths → FilePathsGlobExt
   1084.7 ms  ✓ FilePaths → FilePathsURIsExt
 200969.5 ms  ✓ ClimateModels
  11742.5 ms  ✓ DelaunayTriangulation
   4724.1 ms  ✓ GLM
   5453.9 ms  ✓ MeshArrays → MeshArraysDataDepsExt
   4447.9 ms  ✓ MeshArrays → MeshArraysJLD2Ext
  12332.7 ms  ✓ MeshArrays → MeshArraysGeoJSONExt
   1027.2 ms  ✓ AirSeaFluxes
 263218.1 ms  ✓ ClimateModels → ClimateModelsNetCDFExt
 540365.9 ms  ✓ Makie
 244550.8 ms  ✓ MITgcm
 471729.7 ms  ✓ Climatology
 413292.2 ms  ✓ GeoInterface → GeoInterfaceMakieExt

======================================================================================
Information request received. A stacktrace will print followed by a 1.0 second profile
======================================================================================

cmd: /opt/julia/bin/julia 7 running 0 of 1

signal (10): User defined signal 1
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430
ijl_task_get_next at /cache/build/builder-amdci5-4/julialang/julia-release-1-dot-12/src/scheduler.c:457
poptask at ./task.jl:1216
wait at ./task.jl:1228
#wait#398 at ./condition.jl:141
wait at ./condition.jl:136 [inlined]
_trywait at ./asyncevent.jl:185
#634 at ./asyncevent.jl:359
jfptr_YY.634_15147.1 at /opt/julia/lib/julia/sys.so (unknown line)
jl_apply at /cache/build/builder-amdci5-4/julialang/julia-release-1-dot-12/src/julia.h:2391 [inlined]
start_task at /cache/build/builder-amdci5-4/julialang/julia-release-1-dot-12/src/task.c:1252
unknown function (ip: (nil)) at (unknown file)

==============================================================
Profile collected. A report will print at the next yield point
==============================================================

┌ Warning: There were no samples collected in one or more groups.
│ This may be due to idle threads, or you may need to run your
│ program longer (perhaps by running it multiple times),
│ or adjust the delay between samples with `Profile.init()`.
└ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361
Overhead ╎ [+additional indent] Count File:Line  Function
=========================================================
Thread 1 (default) Task 0x000075a43f211d20 Total snapshots: 594. Utilization: 0%
   ╎594 @Base/asyncevent.jl:359  (::Base.var"#634#635"{FileWatching.Pidfile.var…
   ╎ 594 @Base/asyncevent.jl:185  _trywait(t::Timer)
   ╎  594 @Base/condition.jl:136  wait
   ╎   594 @Base/condition.jl:141  wait(c::Base.GenericCondition{Base.Threads.S…
   ╎    594 @Base/task.jl:1228  wait()
593╎     594 @Base/task.jl:1216  poptask(W::Base.IntrusiveLinkedListSynchronize…


======================================================================================
Information request received. A stacktrace will print followed by a 1.0 second profile
======================================================================================

cmd: /opt/julia/bin/julia 1 running 0 of 1

signal (10): User defined signal 1
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430
ijl_task_get_next at /cache/build/builder-amdci5-4/julialang/julia-release-1-dot-12/src/scheduler.c:457
poptask at ./task.jl:1216
wait at ./task.jl:1228
task_done_hook at ./task.jl:868
jfptr_task_done_hook_59905.1 at /opt/julia/lib/julia/sys.so (unknown line)
jl_apply at /cache/build/builder-amdci5-4/julialang/julia-release-1-dot-12/src/julia.h:2391 [inlined]
jl_finish_task at /cache/build/builder-amdci5-4/julialang/julia-release-1-dot-12/src/task.c:341
start_task at /cache/build/builder-amdci5-4/julialang/julia-release-1-dot-12/src/task.c:1263
unknown function (ip: (nil)) at (unknown file)

==============================================================
Profile collected. A report will print at the next yield point
==============================================================

┌ Warning: There were no samples collected in one or more groups.
│ This may be due to idle threads, or you may need to run your
│ program longer (perhaps by running it multiple times),
│ or adjust the delay between samples with `Profile.init()`.
└ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361
Overhead ╎ [+additional indent] Count File:Line  Function
=========================================================
Thread 1 (default) Task 0x00007f024b914790 Total snapshots: 573. Utilization: 0%
   ╎573 @Base/task.jl:868  task_done_hook(t::Task)
   ╎ 573 @Base/task.jl:1228  wait()
572╎  573 @Base/task.jl:1216  poptask(W::Base.IntrusiveLinkedListSynchronized{T…


[7] signal 15: Terminated
in expression starting at /PkgEval.jl/scripts/precompile.jl:34
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430
ijl_task_get_next at /cache/build/builder-amdci5-4/julialang/julia-release-1-dot-12/src/scheduler.c:457
poptask at ./task.jl:1216
wait at ./task.jl:1228
#wait#398 at ./condition.jl:141
wait at ./condition.jl:136 [inlined]
_trywait at ./asyncevent.jl:185
#634 at ./asyncevent.jl:359
jfptr_YY.634_15147.1 at /opt/julia/lib/julia/sys.so (unknown line)
jl_apply at /cache/build/builder-amdci5-4/julialang/julia-release-1-dot-12/src/julia.h:2391 [inlined]
start_task at /cache/build/builder-amdci5-4/julialang/julia-release-1-dot-12/src/task.c:1252
unknown function (ip: (nil)) at (unknown file)
Allocations: 16372137 (Pool: 16371123; Big: 1014); GC: 14

[1] signal 15: Terminated
in expression starting at /PkgEval.jl/scripts/evaluate.jl:156
epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404
uv_run at /workspace/srcdir/libuv/src/unix/core.c:430
ijl_task_get_next at /cache/build/builder-amdci5-4/julialang/julia-release-1-dot-12/src/scheduler.c:457
poptask at ./task.jl:1216
wait at ./task.jl:1228
#wait#398 at ./condition.jl:141
wait at ./condition.jl:136 [inlined]
_trywait at ./asyncevent.jl:185
profile_printing_listener at ./Base.jl:332
#start_profile_listener##0 at ./Base.jl:352
jfptr_YY.start_profile_listenerYY.YY.0_16003.1 at /opt/julia/lib/julia/sys.so (unknown line)
jl_apply at /cache/build/builder-amdci5-4/julialang/julia-release-1-dot-12/src/julia.h:2391 [inlined]
start_task at /cache/build/builder-amdci5-4/julialang/julia-release-1-dot-12/src/task.c:1252
unknown function (ip: (nil)) at (unknown file)
Allocations: 15242739 (Pool: 15242039; Big: 700); GC: 12

PkgEval terminated after 2744.97s: test duration exceeded the time limit