Package evaluation to test UMAP on Julia 1.10.10 (c8be17dcfd*) started at 2026-02-02T20:48:06.746 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.10` Set-up completed after 5.17s ################################################################################ # Installation # Installing UMAP... Resolving package versions... Updating `~/.julia/environments/v1.10/Project.toml` [c4f8c510] + UMAP v0.2.0 Updating `~/.julia/environments/v1.10/Manifest.toml` [47edcb42] + ADTypes v1.21.0 [7d9f7c33] + Accessors v0.1.43 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [7d9fca2a] + Arpack v0.5.4 [4fba245c] + ArrayInterface v7.22.0 [bbf7d656] + CommonSubexpressions v0.3.1 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.16 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.123 [ffbed154] + DocStringExtensions v0.9.5 [1a297f60] + FillArrays v1.16.0 [6a86dc24] + FiniteDiff v2.29.0 [f6369f11] + ForwardDiff v1.3.2 [86223c79] + Graphs v1.13.4 [34004b35] + HypergeometricFunctions v0.3.28 [d25df0c9] + Inflate v0.1.5 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [692b3bcd] + JLLWrappers v1.7.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [2fda8390] + LsqFit v0.15.1 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 ⌅ [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [dd2c4c9e] + NearestNeighborDescent v0.3.8 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.5.1 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [efcf1570] + Setfield v1.1.2 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 [c4f8c510] + UMAP v0.2.0 ⌅ [68821587] + Arpack_jll v3.5.2+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts [2a0f44e3] + Base64 [ade2ca70] + Dates [8ba89e20] + Distributed [9fa8497b] + Future [b77e0a4c] + InteractiveUtils [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [56ddb016] + Logging [d6f4376e] + Markdown [de0858da] + Printf [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [6462fe0b] + Sockets [2f01184e] + SparseArrays v1.10.0 [10745b16] + Statistics v1.10.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [4536629a] + OpenBLAS_jll v0.3.23+5 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.2.1+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 9.72s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... ✗ UMAP 0 dependencies successfully precompiled in 15 seconds. 131 already precompiled. ERROR: LoadError: The following 1 direct dependency failed to precompile: UMAP Failed to precompile UMAP [c4f8c510-2410-5be4-91d7-4fbaeb39457e] to "/home/pkgeval/.julia/compiled/v1.10/UMAP/jl_tq0lj8". ERROR: LoadError: ParseError: # Error @ /home/pkgeval/.julia/packages/UMAP/awhfv/src/UMAP.jl:23:8 # ┌────────────────────────────────────────────────────────── public fit, transform, UMAPConfig, UMAPResult, UMAPTransformResult ┘ ── Expected `end` Stacktrace: [1] top-level scope @ ~/.julia/packages/UMAP/awhfv/src/UMAP.jl:23 [2] include @ ./Base.jl:495 [inlined] [3] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2295 [4] top-level scope @ stdin:4 in expression starting at /home/pkgeval/.julia/packages/UMAP/awhfv/src/UMAP.jl:23 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:34 Precompilation failed after 20.26s ################################################################################ # Testing # Testing UMAP Status `/tmp/jl_z6mb6d/Project.toml` [7d9f7c33] Accessors v0.1.43 [a0c0ee7d] DifferentiationInterface v0.7.16 [b4f34e82] Distances v0.10.12 [dd2c4c9e] NearestNeighborDescent v0.3.8 [c4f8c510] UMAP v0.2.0 [e88e6eb3] Zygote v0.7.10 [37e2e46d] LinearAlgebra [9a3f8284] Random [2f01184e] SparseArrays v1.10.0 [8dfed614] Test Status `/tmp/jl_z6mb6d/Manifest.toml` [47edcb42] ADTypes v1.21.0 [621f4979] AbstractFFTs v1.5.0 [7d9f7c33] Accessors v0.1.43 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [ec485272] ArnoldiMethod v0.4.0 [7d9fca2a] Arpack v0.5.4 [4fba245c] ArrayInterface v7.22.0 [082447d4] ChainRules v1.72.6 [d360d2e6] ChainRulesCore v1.26.0 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.6.0 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.16 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.123 [ffbed154] DocStringExtensions v0.9.5 [1a297f60] FillArrays v1.16.0 [6a86dc24] FiniteDiff v2.29.0 [f6369f11] ForwardDiff v1.3.2 [46192b85] GPUArraysCore v0.2.0 [86223c79] Graphs v1.13.4 [34004b35] HypergeometricFunctions v0.3.28 [7869d1d1] IRTools v0.4.15 [d25df0c9] Inflate v0.1.5 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [2ab3a3ac] LogExpFunctions v0.3.29 [2fda8390] LsqFit v0.15.1 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 ⌅ [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 [dd2c4c9e] NearestNeighborDescent v0.3.8 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.37 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.5.1 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [c1ae055f] RealDot v0.1.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [efcf1570] Setfield v1.1.2 [699a6c99] SimpleTraits v0.9.5 [a2af1166] SortingAlgorithms v1.2.2 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.6.1 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 [4c63d2b9] StatsFuns v1.5.2 [09ab397b] StructArrays v0.7.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [c4f8c510] UMAP v0.2.0 [e88e6eb3] Zygote v0.7.10 [700de1a5] ZygoteRules v0.2.7 ⌅ [68821587] Arpack_jll v3.5.2+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [56f22d72] Artifacts [2a0f44e3] Base64 [ade2ca70] Dates [8ba89e20] Distributed [9fa8497b] Future [b77e0a4c] InteractiveUtils [8f399da3] Libdl [37e2e46d] LinearAlgebra [56ddb016] Logging [d6f4376e] Markdown [de0858da] Printf [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [6462fe0b] Sockets [2f01184e] SparseArrays v1.10.0 [10745b16] Statistics v1.10.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [4536629a] OpenBLAS_jll v0.3.23+5 [05823500] OpenLibm_jll v0.8.5+0 [bea87d4a] SuiteSparse_jll v7.2.1+1 [8e850b90] libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ERROR: LoadError: ParseError: # Error @ /home/pkgeval/.julia/packages/UMAP/awhfv/src/UMAP.jl:23:8 # ┌────────────────────────────────────────────────────────── public fit, transform, UMAPConfig, UMAPResult, UMAPTransformResult ┘ ── Expected `end` Stacktrace: [1] top-level scope @ ~/.julia/packages/UMAP/awhfv/src/UMAP.jl:23 [2] include @ ./Base.jl:495 [inlined] [3] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2295 [4] top-level scope @ stdin:4 in expression starting at /home/pkgeval/.julia/packages/UMAP/awhfv/src/UMAP.jl:23 in expression starting at stdin:4 ERROR: LoadError: Failed to precompile UMAP [c4f8c510-2410-5be4-91d7-4fbaeb39457e] to "/home/pkgeval/.julia/compiled/v1.10/UMAP/jl_TtlsCT". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:2542 [3] compilecache @ ./loading.jl:2414 [inlined] [4] (::Base.var"#971#972"{Base.PkgId})() @ Base ./loading.jl:2047 [5] mkpidlock(f::Base.var"#971#972"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93 [6] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111 [8] #invokelatest#2 @ ./essentials.jl:894 [inlined] [9] invokelatest @ ./essentials.jl:889 [inlined] [10] maybe_cachefile_lock(f::Base.var"#971#972"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3057 [11] maybe_cachefile_lock @ ./loading.jl:3054 [inlined] [12] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2043 [13] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:1885 [14] #invoke_in_world#3 @ ./essentials.jl:926 [inlined] [15] invoke_in_world @ ./essentials.jl:923 [inlined] [16] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:1876 [17] macro expansion @ ./loading.jl:1863 [inlined] [18] macro expansion @ ./lock.jl:270 [inlined] [19] __require(into::Module, mod::Symbol) @ Base ./loading.jl:1826 [20] #invoke_in_world#3 @ ./essentials.jl:926 [inlined] [21] invoke_in_world @ ./essentials.jl:923 [inlined] [22] require(into::Module, mod::Symbol) @ Base ./loading.jl:1819 [23] include(fname::String) @ Base.MainInclude ./client.jl:487 [24] top-level scope @ none:6 in expression starting at /home/pkgeval/.julia/packages/UMAP/awhfv/test/runtests.jl:5 Testing failed after 14.24s ERROR: LoadError: Package UMAP errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034 [3] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 70.27s: package fails to precompile