Package evaluation to test Silico on Julia 1.10.10 (c8be17dcfd*) started at 2026-02-03T03:18:09.002 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.10` Set-up completed after 5.14s ################################################################################ # Installation # Installing Silico... Resolving package versions... Installed Blink ─ v0.12.5 Installed WebIO ─ v0.8.21 Updating `~/.julia/environments/v1.10/Project.toml` [048c718f] + Silico v0.3.0 Updating `~/.julia/environments/v1.10/Manifest.toml` [14f7f29c] + AMD v0.5.3 ⌅ [c3fe647b] + AbstractAlgebra v0.27.10 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.43 ⌅ [79e6a3ab] + Adapt v3.7.2 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 ⌅ [4fba245c] + ArrayInterface v6.0.23 [30b0a656] + ArrayInterfaceCore v0.1.29 [015c0d05] + ArrayInterfaceOffsetArrays v0.1.7 ⌃ [b0d46f97] + ArrayInterfaceStaticArrays v0.1.4 [dd5226c6] + ArrayInterfaceStaticArraysCore v0.1.4 [bf4720bc] + AssetRegistry v0.1.1 ⌅ [15f4f7f2] + AutoHashEquals v0.2.0 [198e06fe] + BangBang v0.4.7 [9718e550] + Baselet v0.1.1 [6e4b80f9] + BenchmarkTools v1.6.3 ⌅ [e2ed5e7c] + Bijections v0.1.10 [9e28174c] + BinDeps v1.0.2 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 ⌃ [ad839575] + Blink v0.12.5 ⌅ [2a0fbf3d] + CPUSummary v0.1.30 [49dc2e85] + Calculus v0.5.2 [7057c7e9] + Cassette v0.3.14 [d360d2e6] + ChainRulesCore v1.26.0 ⌃ [fb6a15b2] + CloseOpenIntervals v0.1.11 [523fee87] + CodecBzip2 v0.8.5 [944b1d66] + CodecZlib v0.7.8 ⌅ [3da002f7] + ColorTypes v0.11.5 ⌅ [5ae59095] + Colors v0.12.8 [861a8166] + Combinatorics v1.1.0 [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.1 [b152e2b5] + CompositeTypes v0.1.4 [a33af91c] + CompositionsBase v0.1.2 ⌅ [187b0558] + ConstructionBase v1.5.6 [150eb455] + CoordinateTransformations v0.6.4 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [31c24e10] + Distributions v0.25.123 ⌅ [ffbed154] + DocStringExtensions v0.8.6 ⌅ [5b8099bc] + DomainSets v0.5.14 [fa6b7ba4] + DualNumbers v0.6.9 ⌅ [7c1d4256] + DynamicPolynomials v0.4.6 [4e289a0a] + EnumX v1.0.6 [e2ba6199] + ExprTools v0.1.10 [c87230d0] + FFMPEG v0.4.5 ⌃ [5789e2e9] + FileIO v1.16.5 ⌅ [1a297f60] + FillArrays v0.13.11 ⌅ [6a86dc24] + FiniteDiff v2.17.0 [53c48c17] + FixedPointNumbers v0.8.5 [59287772] + Formatting v0.4.3 ⌅ [f6369f11] + ForwardDiff v0.10.39 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [de31a74c] + FunctionalCollections v0.5.0 ⌅ [46192b85] + GPUArraysCore v0.1.5 [14197337] + GenericLinearAlgebra v0.3.19 ⌅ [5c1252a2] + GeometryBasics v0.3.13 [4d00f742] + GeometryTypes v0.8.5 ⌅ [0b43b601] + Groebner v0.2.11 ⌅ [d5909c97] + GroupsCore v0.4.2 ⌅ [cd3eb016] + HTTP v0.9.17 [9fb69e20] + Hiccup v0.2.2 [3e5b6fbb] + HostCPUFeatures v0.1.18 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [83e8ac13] + IniFile v0.5.1 [22cec73e] + InitialValues v0.3.1 [18e54dd8] + IntegerMathUtils v0.1.3 [8197267c] + IntervalSets v0.7.13 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [c8e1da08] + IterTools v1.10.0 [605048dd] + IterativeLQR v0.2.3 [82899510] + IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] + JLD2 v0.4.55 [692b3bcd] + JLLWrappers v1.7.1 [97c1335a] + JSExpr v0.5.4 ⌅ [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.3 [4076af6c] + JuMP v1.29.4 [b964fa9f] + LaTeXStrings v1.4.0 ⌃ [2ee39098] + LabelledArrays v1.13.0 ⌅ [23fbe1c1] + Latexify v0.15.21 ⌃ [10f19ff3] + LayoutPointers v0.1.13 [50d2b5c4] + Lazy v0.15.1 [2ab3a3ac] + LogExpFunctions v0.3.29 ⌅ [bdcacae8] + LoopVectorization v0.12.120 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 ⌃ [b8f27783] + MathOptInterface v1.48.0 [739be429] + MbedTLS v1.1.9 [ff64e54f] + Mehrotra v0.3.0 ⌅ [283c5d60] + MeshCat v0.14.1 ⌅ [e6723b4c] + Meshing v0.5.7 ⌅ [e9d8d322] + Metatheory v1.3.5 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [99f44e22] + MsgPack v1.2.1 ⌅ [102ac46a] + MultivariatePolynomials v0.4.7 [ffc61752] + Mustache v1.0.21 [d8a4904e] + MutableArithmetics v1.6.7 ⌅ [a975b10e] + Mux v0.7.6 [77ba4419] + NaNMath v1.1.3 [510215fc] + Observables v0.5.5 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.37 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [fa939f87] + Pidfile v1.3.0 ⌅ [1d0040c9] + PolyesterWeave v0.1.13 ⌅ [67491407] + Polyhedra v0.7.8 ⌅ [d236fae5] + PreallocationTools v0.4.11 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.5.1 [27ebfcd6] + Primes v0.5.7 [43287f4e] + PtrArrays v1.3.0 ⌅ [bfc457fd] + QDLDL v0.3.0 [1fd47b50] + QuadGK v2.11.2 ⌅ [94ee1d12] + Quaternions v0.5.7 [fb686558] + RandomExtensions v0.4.4 [3cdcf5f2] + RecipesBase v1.3.4 ⌅ [731186ca] + RecursiveArrayTools v2.32.3 [189a3867] + Reexport v1.2.2 [42d2dcc6] + Referenceables v0.1.3 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [72694564] + RobotVisualizer v0.3.0 [6038ab10] + Rotations v1.7.1 [7e49a35a] + RuntimeGeneratedFunctions v0.5.17 [3cdde19b] + SIMDDualNumbers v0.1.1 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 ⌅ [0bca4576] + SciMLBase v1.81.0 [6c6a2e73] + Scratch v1.3.0 [efcf1570] + Setfield v1.1.2 [048c718f] + Silico v0.3.0 [66db9d55] + SnoopPrecompile v1.0.3 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [171d559e] + SplittablesBase v0.1.15 ⌅ [aedffcd0] + Static v0.7.8 ⌅ [90137ffa] + StaticArrays v1.5.9 [1e83bf80] + StaticArraysCore v1.4.4 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 [4c63d2b9] + StatsFuns v1.5.2 ⌅ [09ab397b] + StructArrays v0.6.18 [856f2bd8] + StructTypes v1.11.0 ⌅ [d1185830] + SymbolicUtils v0.19.11 ⌅ [0c5d862f] + Symbolics v4.9.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 ⌅ [8ea1fca8] + TermInterface v0.2.3 [8290d209] + ThreadingUtilities v0.5.5 [ac1d9e8a] + ThreadsX v0.1.12 [a759f4b9] + TimerOutputs v0.5.29 [3bb67fe8] + TranscodingStreams v0.11.3 [28d57a85] + Transducers v0.4.85 [a2a6695c] + TreeViews v0.3.0 [30578b45] + URIParser v0.4.1 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 ⌃ [3d5dd08c] + VectorizationBase v0.21.58 [0f1e0344] + WebIO v0.8.21 ⌃ [104b5d7c] + WebSockets v1.5.9 [cc8bc4a8] + Widgets v0.6.7 [700de1a5] + ZygoteRules v0.2.7 [6e34b625] + Bzip2_jll v1.0.9+0 [83423d85] + Cairo_jll v1.18.5+0 [5ae413db] + EarCut_jll v2.2.4+0 [2e619515] + Expat_jll v2.7.3+0 [b22a6f82] + FFMPEG_jll v8.0.1+0 [a3f928ae] + Fontconfig_jll v2.17.1+0 [d7e528f0] + FreeType2_jll v2.13.4+0 [559328eb] + FriBidi_jll v1.0.17+0 [b0724c58] + GettextRuntime_jll v0.22.4+0 [7746bdde] + Glib_jll v2.86.2+0 [3b182d85] + Graphite2_jll v1.3.15+0 [2e76f6c2] + HarfBuzz_jll v8.5.1+0 [c1c5ebd0] + LAME_jll v3.100.3+0 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [dd4b983a] + LZO_jll v2.10.3+0 ⌅ [e9f186c6] + Libffi_jll v3.4.7+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [4b2f31a3] + Libmount_jll v2.41.2+0 [38a345b3] + Libuuid_jll v2.41.2+0 [e7412a2a] + Ogg_jll v1.3.6+0 [458c3c95] + OpenSSL_jll v3.5.5+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [91d4177d] + Opus_jll v1.6.1+0 ⌅ [30392449] + Pixman_jll v0.44.2+0 [f50d1b31] + Rmath_jll v0.5.1+0 [4f6342f7] + Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.7+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [a4ae2306] + libaom_jll v3.13.1+0 [0ac62f75] + libass_jll v0.17.4+0 [f638f0a6] + libfdk_aac_jll v2.0.4+0 [b53b4c65] + libpng_jll v1.6.54+0 [f27f6e37] + libvorbis_jll v1.3.8+0 ⌅ [1270edf5] + x264_jll v10164.0.1+0 [dfaa095f] + x265_jll v4.1.0+0 [0dad84c5] + ArgTools v1.1.1 [56f22d72] + Artifacts [2a0f44e3] + Base64 [ade2ca70] + Dates [8ba89e20] + Distributed [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching [9fa8497b] + Future [b77e0a4c] + InteractiveUtils [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [56ddb016] + Logging [d6f4376e] + Markdown [a63ad114] + Mmap [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.10.0 [de0858da] + Printf [9abbd945] + Profile [3fa0cd96] + REPL [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [6462fe0b] + Sockets [2f01184e] + SparseArrays v1.10.0 [10745b16] + Statistics v1.10.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test [cf7118a7] + UUIDs [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.4.0+0 [e37daf67] + LibGit2_jll v1.6.4+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.23+5 [05823500] + OpenLibm_jll v0.8.5+0 [efcefdf7] + PCRE2_jll v10.42.0+1 [bea87d4a] + SuiteSparse_jll v7.2.1+1 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.52.0+1 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building WebIO → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/0eef0765186f7452e52236fa42ca8c9b3c11c6e3/build.log` Building Blink → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/08d0b679fd7caa49e2bca9214b131289e19808c0/build.log` Installation completed after 27.13s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... ✗ StaticArrays 7275.0 ms ✓ Colors 1855.4 ms ✓ PreallocationTools 50924.7 ms ✓ MathOptInterface ✗ CoordinateTransformations ✗ DomainSets ✗ ConstructionBase → ConstructionBaseStaticArraysExt ✗ Adapt → AdaptStaticArraysExt ✗ GeometryTypes ✗ Rotations ✗ ForwardDiff → ForwardDiffStaticArraysExt 1908.7 ms ✓ Widgets 89337.1 ms ✓ JuMP ✗ Accessors → StaticArraysExt ✗ FiniteDiff ✗ StructArrays → StructArraysStaticArraysExt ✗ ArrayInterfaceStaticArrays ✗ Rotations → RotationsRecipesBaseExt 5868.8 ms ✓ WebIO ✗ BangBang → BangBangStaticArraysExt ✗ GeometryBasics ✗ LabelledArrays ✗ LayoutPointers 6408.5 ms ✓ JSExpr ✗ Meshing ✗ Polyhedra ✗ SymbolicUtils ✗ VectorizationBase 7076.4 ms ✓ Blink ✗ Symbolics ✗ SLEEFPirates ✗ MeshCat ✗ IterativeLQR ✗ SIMDDualNumbers ✗ RobotVisualizer ✗ LoopVectorization ✗ Mehrotra ✗ Silico 8 dependencies successfully precompiled in 446 seconds. 226 already precompiled. ERROR: LoadError: The following 2 direct dependencies failed to precompile: Silico Failed to precompile Silico [048c718f-54a7-45b2-94ea-30214ee46b03] to "/home/pkgeval/.julia/compiled/v1.10/Silico/jl_zm0FEp". ERROR: LoadError: UndefVarError: `require_one_based_indexing` not defined Stacktrace: [1] include @ ./Base.jl:495 [inlined] [2] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2295 [3] top-level scope @ stdin:4 in expression starting at /home/pkgeval/.julia/packages/StaticArrays/PUoe1/src/StaticArrays.jl:1 in expression starting at stdin:4 ERROR: LoadError: Failed to precompile StaticArrays [90137ffa-7385-5640-81b9-e52037218182] to "/home/pkgeval/.julia/compiled/v1.10/StaticArrays/jl_WgDe0V". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:2542 [3] compilecache @ ./loading.jl:2414 [inlined] [4] (::Base.var"#971#972"{Base.PkgId})() @ Base ./loading.jl:2047 [5] mkpidlock(f::Base.var"#971#972"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93 [6] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111 [8] #invokelatest#2 @ ./essentials.jl:894 [inlined] [9] invokelatest @ ./essentials.jl:889 [inlined] [10] maybe_cachefile_lock(f::Base.var"#971#972"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3057 [11] maybe_cachefile_lock @ ./loading.jl:3054 [inlined] [12] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2043 [13] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:1885 [14] #invoke_in_world#3 @ ./essentials.jl:926 [inlined] [15] invoke_in_world @ ./essentials.jl:923 [inlined] [16] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:1876 [17] macro expansion @ ./loading.jl:1863 [inlined] [18] macro expansion @ ./lock.jl:270 [inlined] [19] __require(into::Module, mod::Symbol) @ Base ./loading.jl:1826 [20] #invoke_in_world#3 @ ./essentials.jl:926 [inlined] [21] invoke_in_world @ ./essentials.jl:923 [inlined] [22] require(into::Module, mod::Symbol) @ Base ./loading.jl:1819 [23] include @ ./Base.jl:495 [inlined] [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2295 [25] top-level scope @ stdin:4 in expression starting at /home/pkgeval/.julia/packages/GeometryBasics/pjtu1/src/GeometryBasics.jl:1 in expression starting at stdin:4 ERROR: LoadError: Failed to precompile GeometryBasics [5c1252a2-5f33-56bf-86c9-59e7332b4326] to "/home/pkgeval/.julia/compiled/v1.10/GeometryBasics/jl_taJOzn". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:2542 [3] compilecache @ ./loading.jl:2414 [inlined] [4] (::Base.var"#971#972"{Base.PkgId})() @ Base ./loading.jl:2047 [5] mkpidlock(f::Base.var"#971#972"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93 [6] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111 [8] #invokelatest#2 @ ./essentials.jl:894 [inlined] [9] invokelatest @ ./essentials.jl:889 [inlined] [10] maybe_cachefile_lock(f::Base.var"#971#972"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3057 [11] maybe_cachefile_lock @ ./loading.jl:3054 [inlined] [12] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2043 [13] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:1885 [14] #invoke_in_world#3 @ ./essentials.jl:926 [inlined] [15] invoke_in_world @ ./essentials.jl:923 [inlined] [16] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:1876 [17] macro expansion @ ./loading.jl:1863 [inlined] [18] macro expansion @ ./lock.jl:270 [inlined] [19] __require(into::Module, mod::Symbol) @ Base ./loading.jl:1826 [20] #invoke_in_world#3 @ ./essentials.jl:926 [inlined] [21] invoke_in_world @ ./essentials.jl:923 [inlined] [22] require(into::Module, mod::Symbol) @ Base ./loading.jl:1819 [23] include @ ./Base.jl:495 [inlined] [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2295 [25] top-level scope @ stdin:4 in expression starting at /home/pkgeval/.julia/packages/Silico/IEb67/src/Silico.jl:1 in expression starting at stdin:4 FiniteDiff Failed to precompile FiniteDiff [6a86dc24-6348-571c-b903-95158fe2bd41] to "/home/pkgeval/.julia/compiled/v1.10/FiniteDiff/jl_sPUJ8W". ERROR: LoadError: UndefVarError: `require_one_based_indexing` not defined Stacktrace: [1] include @ ./Base.jl:495 [inlined] [2] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2295 [3] top-level scope @ stdin:4 in expression starting at /home/pkgeval/.julia/packages/StaticArrays/PUoe1/src/StaticArrays.jl:1 in expression starting at stdin:4 ERROR: LoadError: Failed to precompile StaticArrays [90137ffa-7385-5640-81b9-e52037218182] to "/home/pkgeval/.julia/compiled/v1.10/StaticArrays/jl_HMbgUW". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:2542 [3] compilecache @ ./loading.jl:2414 [inlined] [4] (::Base.var"#971#972"{Base.PkgId})() @ Base ./loading.jl:2047 [5] mkpidlock(f::Base.var"#971#972"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93 [6] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111 [8] #invokelatest#2 @ ./essentials.jl:894 [inlined] [9] invokelatest @ ./essentials.jl:889 [inlined] [10] maybe_cachefile_lock(f::Base.var"#971#972"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3057 [11] maybe_cachefile_lock @ ./loading.jl:3054 [inlined] [12] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2043 [13] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:1885 [14] #invoke_in_world#3 @ ./essentials.jl:926 [inlined] [15] invoke_in_world @ ./essentials.jl:923 [inlined] [16] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:1876 [17] macro expansion @ ./loading.jl:1863 [inlined] [18] macro expansion @ ./lock.jl:270 [inlined] [19] __require(into::Module, mod::Symbol) @ Base ./loading.jl:1826 [20] #invoke_in_world#3 @ ./essentials.jl:926 [inlined] [21] invoke_in_world @ ./essentials.jl:923 [inlined] [22] require(into::Module, mod::Symbol) @ Base ./loading.jl:1819 [23] include @ ./Base.jl:495 [inlined] [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2295 [25] top-level scope @ stdin:4 in expression starting at /home/pkgeval/.julia/packages/FiniteDiff/40JnL/src/FiniteDiff.jl:1 in expression starting at stdin:4 in expression starting at /PkgEval.jl/scripts/precompile.jl:34 Precompilation failed after 432.88s ################################################################################ # Testing # Testing Silico Status `/tmp/jl_CsoI8Y/Project.toml` [6e4b80f9] BenchmarkTools v1.6.3 ⌅ [6a86dc24] FiniteDiff v2.17.0 [048c718f] Silico v0.3.0 [37e2e46d] LinearAlgebra [9a3f8284] Random [2f01184e] SparseArrays v1.10.0 [8dfed614] Test Status `/tmp/jl_CsoI8Y/Manifest.toml` [14f7f29c] AMD v0.5.3 ⌅ [c3fe647b] AbstractAlgebra v0.27.10 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.43 ⌅ [79e6a3ab] Adapt v3.7.2 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 ⌅ [4fba245c] ArrayInterface v6.0.23 [30b0a656] ArrayInterfaceCore v0.1.29 [015c0d05] ArrayInterfaceOffsetArrays v0.1.7 ⌃ [b0d46f97] ArrayInterfaceStaticArrays v0.1.4 [dd5226c6] ArrayInterfaceStaticArraysCore v0.1.4 [bf4720bc] AssetRegistry v0.1.1 ⌅ [15f4f7f2] AutoHashEquals v0.2.0 [198e06fe] BangBang v0.4.7 [9718e550] Baselet v0.1.1 [6e4b80f9] BenchmarkTools v1.6.3 ⌅ [e2ed5e7c] Bijections v0.1.10 [9e28174c] BinDeps v1.0.2 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 ⌃ [ad839575] Blink v0.12.5 ⌅ [2a0fbf3d] CPUSummary v0.1.30 [49dc2e85] Calculus v0.5.2 [7057c7e9] Cassette v0.3.14 [d360d2e6] ChainRulesCore v1.26.0 ⌃ [fb6a15b2] CloseOpenIntervals v0.1.11 [523fee87] CodecBzip2 v0.8.5 [944b1d66] CodecZlib v0.7.8 ⌅ [3da002f7] ColorTypes v0.11.5 ⌅ [5ae59095] Colors v0.12.8 [861a8166] Combinatorics v1.1.0 [38540f10] CommonSolve v0.2.6 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [b152e2b5] CompositeTypes v0.1.4 [a33af91c] CompositionsBase v0.1.2 ⌅ [187b0558] ConstructionBase v1.5.6 [150eb455] CoordinateTransformations v0.6.4 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI 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[44cfe95a] Pkg v1.10.0 [de0858da] Printf [9abbd945] Profile [3fa0cd96] REPL [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [6462fe0b] Sockets [2f01184e] SparseArrays v1.10.0 [10745b16] Statistics v1.10.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.4.0+0 [e37daf67] LibGit2_jll v1.6.4+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.1010+0 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.23+5 [05823500] OpenLibm_jll v0.8.5+0 [efcefdf7] PCRE2_jll v10.42.0+1 [bea87d4a] SuiteSparse_jll v7.2.1+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.52.0+1 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... ERROR: LoadError: UndefVarError: `require_one_based_indexing` not defined Stacktrace: [1] include @ ./Base.jl:495 [inlined] [2] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2295 [3] top-level scope @ stdin:4 in expression starting at /home/pkgeval/.julia/packages/StaticArrays/PUoe1/src/StaticArrays.jl:1 in expression starting at stdin:4 ERROR: LoadError: Failed to precompile StaticArrays [90137ffa-7385-5640-81b9-e52037218182] to "/home/pkgeval/.julia/compiled/v1.10/StaticArrays/jl_7Gq8uX". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:2542 [3] compilecache @ ./loading.jl:2414 [inlined] [4] (::Base.var"#971#972"{Base.PkgId})() @ Base ./loading.jl:2047 [5] mkpidlock(f::Base.var"#971#972"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93 [6] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111 [8] #invokelatest#2 @ ./essentials.jl:894 [inlined] [9] invokelatest @ ./essentials.jl:889 [inlined] [10] maybe_cachefile_lock(f::Base.var"#971#972"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3057 [11] maybe_cachefile_lock @ ./loading.jl:3054 [inlined] [12] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2043 [13] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:1885 [14] #invoke_in_world#3 @ ./essentials.jl:926 [inlined] [15] invoke_in_world @ ./essentials.jl:923 [inlined] [16] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:1876 [17] macro expansion @ ./loading.jl:1863 [inlined] [18] macro expansion @ ./lock.jl:270 [inlined] [19] __require(into::Module, mod::Symbol) @ Base ./loading.jl:1826 [20] #invoke_in_world#3 @ ./essentials.jl:926 [inlined] [21] invoke_in_world @ ./essentials.jl:923 [inlined] [22] require(into::Module, mod::Symbol) @ Base ./loading.jl:1819 [23] include @ ./Base.jl:495 [inlined] [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2295 [25] top-level scope @ stdin:4 in expression starting at /home/pkgeval/.julia/packages/FiniteDiff/40JnL/src/FiniteDiff.jl:1 in expression starting at stdin:4 ERROR: LoadError: Failed to precompile FiniteDiff [6a86dc24-6348-571c-b903-95158fe2bd41] to "/home/pkgeval/.julia/compiled/v1.10/FiniteDiff/jl_IYD9XV". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:2542 [3] compilecache @ ./loading.jl:2414 [inlined] [4] (::Base.var"#971#972"{Base.PkgId})() @ Base ./loading.jl:2047 [5] mkpidlock(f::Base.var"#971#972"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93 [6] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111 [8] #invokelatest#2 @ ./essentials.jl:894 [inlined] [9] invokelatest @ ./essentials.jl:889 [inlined] [10] maybe_cachefile_lock(f::Base.var"#971#972"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3057 [11] maybe_cachefile_lock @ ./loading.jl:3054 [inlined] [12] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2043 [13] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:1885 [14] #invoke_in_world#3 @ ./essentials.jl:926 [inlined] [15] invoke_in_world @ ./essentials.jl:923 [inlined] [16] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:1876 [17] macro expansion @ ./loading.jl:1863 [inlined] [18] macro expansion @ ./lock.jl:270 [inlined] [19] __require(into::Module, mod::Symbol) @ Base ./loading.jl:1826 [20] #invoke_in_world#3 @ ./essentials.jl:926 [inlined] [21] invoke_in_world @ ./essentials.jl:923 [inlined] [22] require(into::Module, mod::Symbol) @ Base ./loading.jl:1819 [23] include(fname::String) @ Base.MainInclude ./client.jl:487 [24] top-level scope @ none:6 in expression starting at /home/pkgeval/.julia/packages/Silico/IEb67/test/runtests.jl:4 Testing failed after 17.32s ERROR: LoadError: Package Silico errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034 [3] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 526.6s: package fails to precompile