Package evaluation to test SeqFold on Julia 1.10.10 (c8be17dcfd*) started at 2026-02-02T13:50:52.283 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.10` Set-up completed after 5.02s ################################################################################ # Installation # Installing SeqFold... Resolving package versions... Updating `~/.julia/environments/v1.10/Project.toml` [b3b2a78d] + SeqFold v0.4.0 Updating `~/.julia/environments/v1.10/Manifest.toml` [b3b2a78d] + SeqFold v0.4.0 [de0858da] + Printf [4ec0a83e] + Unicode Installation completed after 3.89s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... ✗ SeqFold 0 dependencies successfully precompiled in 5 seconds. 12 already precompiled. ERROR: LoadError: The following 1 direct dependency failed to precompile: SeqFold Failed to precompile SeqFold [b3b2a78d-ef5a-44e0-bc1e-af93888afa44] to "/home/pkgeval/.julia/compiled/v1.10/SeqFold/jl_1JFdRv". ERROR: LoadError: ParseError: # Error @ /home/pkgeval/.julia/packages/SeqFold/duiYd/src/SeqFold.jl:17:8 # ┌──────── public Structure public complement, revcomp, gc_content ⋮ include("utils.jl") #────────────────┘ ── Expected `end` Stacktrace: [1] top-level scope @ ~/.julia/packages/SeqFold/duiYd/src/SeqFold.jl:17 [2] include @ ./Base.jl:495 [inlined] [3] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2295 [4] top-level scope @ stdin:4 in expression starting at /home/pkgeval/.julia/packages/SeqFold/duiYd/src/SeqFold.jl:17 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:34 Precompilation failed after 18.36s ################################################################################ # Testing # Testing SeqFold Status `/tmp/jl_83VxHz/Project.toml` [4c88cf16] Aqua v0.8.14 ⌅ [c3a54625] JET v0.9.18 [b3b2a78d] SeqFold v0.4.0 [37e2e46d] LinearAlgebra [56ddb016] Logging [8dfed614] Test Status `/tmp/jl_83VxHz/Manifest.toml` [4c88cf16] Aqua v0.8.14 ⌅ [da1fd8a2] CodeTracking v1.3.9 [34da2185] Compat v4.18.1 ⌅ [c3a54625] JET v0.9.18 ⌅ [aa1ae85d] JuliaInterpreter v0.9.46 ⌅ [70703baa] JuliaSyntax v0.4.10 ⌃ [6f1432cf] LoweredCodeUtils v3.2.2 [1914dd2f] MacroTools v0.5.16 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.5.1 [b3b2a78d] SeqFold v0.4.0 [0dad84c5] ArgTools v1.1.1 [56f22d72] Artifacts [2a0f44e3] Base64 [ade2ca70] Dates [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching [b77e0a4c] InteractiveUtils [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 [8f399da3] Libdl [37e2e46d] LinearAlgebra [56ddb016] Logging [d6f4376e] Markdown [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.10.0 [de0858da] Printf [3fa0cd96] REPL [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [6462fe0b] Sockets [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.4.0+0 [e37daf67] LibGit2_jll v1.6.4+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.1010+0 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.23+5 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.52.0+1 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... ERROR: LoadError: ParseError: # Error @ /home/pkgeval/.julia/packages/SeqFold/duiYd/src/SeqFold.jl:17:8 # ┌──────── public Structure public complement, revcomp, gc_content ⋮ include("utils.jl") #────────────────┘ ── Expected `end` Stacktrace: [1] top-level scope @ ~/.julia/packages/SeqFold/duiYd/src/SeqFold.jl:17 [2] include @ ./Base.jl:495 [inlined] [3] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2295 [4] top-level scope @ stdin:4 in expression starting at /home/pkgeval/.julia/packages/SeqFold/duiYd/src/SeqFold.jl:17 in expression starting at stdin:4 ERROR: LoadError: Failed to precompile SeqFold [b3b2a78d-ef5a-44e0-bc1e-af93888afa44] to "/home/pkgeval/.julia/compiled/v1.10/SeqFold/jl_ey1Y8N". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:2542 [3] compilecache @ ./loading.jl:2414 [inlined] [4] (::Base.var"#971#972"{Base.PkgId})() @ Base ./loading.jl:2047 [5] mkpidlock(f::Base.var"#971#972"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93 [6] #mkpidlock#6 @ /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111 [8] #invokelatest#2 @ ./essentials.jl:894 [inlined] [9] invokelatest @ ./essentials.jl:889 [inlined] [10] maybe_cachefile_lock(f::Base.var"#971#972"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3057 [11] maybe_cachefile_lock @ ./loading.jl:3054 [inlined] [12] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2043 [13] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:1885 [14] #invoke_in_world#3 @ ./essentials.jl:926 [inlined] [15] invoke_in_world @ ./essentials.jl:923 [inlined] [16] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:1876 [17] macro expansion @ ./loading.jl:1863 [inlined] [18] macro expansion @ ./lock.jl:270 [inlined] [19] __require(into::Module, mod::Symbol) @ Base ./loading.jl:1826 [20] #invoke_in_world#3 @ ./essentials.jl:926 [inlined] [21] invoke_in_world @ ./essentials.jl:923 [inlined] [22] require(into::Module, mod::Symbol) @ Base ./loading.jl:1819 [23] include(fname::String) @ Base.MainInclude ./client.jl:487 [24] top-level scope @ none:6 in expression starting at /home/pkgeval/.julia/packages/SeqFold/duiYd/test/runtests.jl:1 Testing failed after 14.65s ERROR: LoadError: Package SeqFold errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034 [3] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 48.2s: package fails to precompile