Package evaluation to test Radiomics on Julia 1.10.10 (c8be17dcfd*) started at 2026-02-02T17:13:01.950 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.10` Set-up completed after 4.84s ################################################################################ # Installation # Installing Radiomics... Resolving package versions... Updating `~/.julia/environments/v1.10/Project.toml` [a80a7044] + Radiomics v1.0.1 Updating `~/.julia/environments/v1.10/Manifest.toml` [66dad0bd] + AliasTables v1.1.3 [944b1d66] + CodecZlib v0.7.8 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [ffbed154] + DocStringExtensions v0.9.5 [92d709cd] + IrrationalConstants v0.2.6 [2ab3a3ac] + LogExpFunctions v0.3.29 [dbb5928d] + MappedArrays v0.4.3 [e1d29d7a] + Missings v1.2.0 [a3a9e032] + NIfTI v0.6.1 [bac558e1] + OrderedCollections v1.8.1 [43287f4e] + PtrArrays v1.3.0 [a80a7044] + Radiomics v1.0.1 [a2af1166] + SortingAlgorithms v1.2.2 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.10 ⌅ [3bb67fe8] + TranscodingStreams v0.9.13 [56f22d72] + Artifacts [2a0f44e3] + Base64 [b77e0a4c] + InteractiveUtils [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [56ddb016] + Logging [d6f4376e] + Markdown [a63ad114] + Mmap [de0858da] + Printf [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [2f01184e] + SparseArrays v1.10.0 [10745b16] + Statistics v1.10.0 [8dfed614] + Test [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [4536629a] + OpenBLAS_jll v0.3.23+5 [bea87d4a] + SuiteSparse_jll v7.2.1+1 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 8.48s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 1894.1 ms ✓ Radiomics 1 dependency successfully precompiled in 3 seconds. 21 already precompiled. Precompilation completed after 13.2s ################################################################################ # Testing # Testing Radiomics Status `/tmp/jl_A5cTm8/Project.toml` [a3a9e032] NIfTI v0.6.1 [a80a7044] Radiomics v1.0.1 [2913bbd2] StatsBase v0.34.10 [37e2e46d] LinearAlgebra [9a3f8284] Random [10745b16] Statistics v1.10.0 [8dfed614] Test Status `/tmp/jl_A5cTm8/Manifest.toml` [66dad0bd] AliasTables v1.1.3 [944b1d66] CodecZlib v0.7.8 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.3 [ffbed154] DocStringExtensions v0.9.5 [92d709cd] IrrationalConstants v0.2.6 [2ab3a3ac] LogExpFunctions v0.3.29 [dbb5928d] MappedArrays v0.4.3 [e1d29d7a] Missings v1.2.0 [a3a9e032] NIfTI v0.6.1 [bac558e1] OrderedCollections v1.8.1 [43287f4e] PtrArrays v1.3.0 [a80a7044] Radiomics v1.0.1 [a2af1166] SortingAlgorithms v1.2.2 [82ae8749] StatsAPI v1.8.0 [2913bbd2] StatsBase v0.34.10 ⌅ [3bb67fe8] TranscodingStreams v0.9.13 [56f22d72] Artifacts [2a0f44e3] Base64 [b77e0a4c] InteractiveUtils [8f399da3] Libdl [37e2e46d] LinearAlgebra [56ddb016] Logging [d6f4376e] Markdown [a63ad114] Mmap [de0858da] Printf [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [2f01184e] SparseArrays v1.10.0 [10745b16] Statistics v1.10.0 [8dfed614] Test [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [4536629a] OpenBLAS_jll v0.3.23+5 [bea87d4a] SuiteSparse_jll v7.2.1+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Radiomics test: Error During Test at /home/pkgeval/.julia/packages/Radiomics/MvOYc/test/runtests.jl:6 Got exception outside of a @test SystemError: opening file "sample_data/CTChest.nii.gz": No such file or directory Stacktrace: [1] systemerror(p::String, errno::Int32; extrainfo::Nothing) @ Base ./error.jl:176 [2] systemerror @ ./error.jl:175 [inlined] [3] open(fname::String; lock::Bool, read::Bool, write::Nothing, create::Nothing, truncate::Nothing, append::Nothing) @ Base ./iostream.jl:293 [4] open @ ./iostream.jl:275 [inlined] [5] open(fname::String, mode::String; lock::Bool) @ Base ./iostream.jl:356 [6] open @ ./iostream.jl:355 [inlined] [7] niopen @ ~/.julia/packages/NIfTI/ytzbJ/src/volume.jl:35 [inlined] [8] niread(file::String; mmap::Bool, mode::String) @ NIfTI ~/.julia/packages/NIfTI/ytzbJ/src/NIfTI.jl:240 [9] niread(file::String) @ NIfTI ~/.julia/packages/NIfTI/ytzbJ/src/NIfTI.jl:239 [10] macro expansion @ ~/.julia/packages/Radiomics/MvOYc/test/runtests.jl:8 [inlined] [11] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1582 [inlined] [12] top-level scope @ ~/.julia/packages/Radiomics/MvOYc/test/runtests.jl:8 [13] include(fname::String) @ Base.MainInclude ./client.jl:487 [14] top-level scope @ none:6 Test Summary: | Error Total Time Radiomics test | 1 1 4.5s ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/Radiomics/MvOYc/test/runtests.jl:6 Testing failed after 11.73s ERROR: LoadError: Package Radiomics errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034 [3] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 47.96s: package tests unexpectedly errored