Package evaluation to test PyBoltz on Julia 1.10.10 (c8be17dcfd*) started at 2026-02-02T17:25:11.660


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.10`

Set-up completed after 3.53s


################################################################################
# Installation
#

Installing PyBoltz...
   Resolving package versions...
    Updating `~/.julia/environments/v1.10/Project.toml`
  [0bca4874] + PyBoltz v0.2.2
    Updating `~/.julia/environments/v1.10/Manifest.toml`
  [34da2185] + Compat v4.18.1
  [992eb4ea] + CondaPkg v0.2.33
  [9a962f9c] + DataAPI v1.16.0
  [e2d170a0] + DataValueInterfaces v1.0.0
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.1
  [0f8b85d8] + JSON3 v1.14.3
  [1914dd2f] + MacroTools v0.5.16
  [0b3b1443] + MicroMamba v0.1.14
  [bac558e1] + OrderedCollections v1.8.1
  [69de0a69] + Parsers v2.8.3
  [fa939f87] + Pidfile v1.3.0
⌅ [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.5.1
  [0bca4874] + PyBoltz v0.2.2
  [6099a3de] + PythonCall v0.9.31
  [6c6a2e73] + Scratch v1.3.0
  [69024149] + StringEncodings v0.3.7
  [856f2bd8] + StructTypes v1.11.0
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
  [e17b2a0c] + UnsafePointers v1.0.0
  [ddb6d928] + YAML v0.4.16
  [94ce4f54] + Libiconv_jll v1.18.0+0
⌅ [f8abcde7] + micromamba_jll v1.5.12+0
  [4d7b5844] + pixi_jll v0.41.3+0
  [0dad84c5] + ArgTools v1.1.1
  [56f22d72] + Artifacts
  [2a0f44e3] + Base64
  [ade2ca70] + Dates
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching
  [b77e0a4c] + InteractiveUtils
  [4af54fe1] + LazyArtifacts
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2
  [8f399da3] + Libdl
  [56ddb016] + Logging
  [d6f4376e] + Markdown
  [a63ad114] + Mmap
  [ca575930] + NetworkOptions v1.2.0
  [44cfe95a] + Pkg v1.10.0
  [de0858da] + Printf
  [3fa0cd96] + REPL
  [9a3f8284] + Random
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization
  [6462fe0b] + Sockets
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test
  [cf7118a7] + UUIDs
  [4ec0a83e] + Unicode
  [deac9b47] + LibCURL_jll v8.4.0+0
  [e37daf67] + LibGit2_jll v1.6.4+0
  [29816b5a] + LibSSH2_jll v1.11.0+1
  [c8ffd9c3] + MbedTLS_jll v2.28.1010+0
  [14a3606d] + MozillaCACerts_jll v2025.12.2
  [83775a58] + Zlib_jll v1.2.13+1
  [8e850ede] + nghttp2_jll v1.52.0+1
  [3f19e933] + p7zip_jll v17.4.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 6.97s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...
Precompiling packages...
  98234.8 ms  ✓ PyBoltz
   6301.5 ms  ✓ PyBoltz → BioStructuresExt
  2 dependencies successfully precompiled in 107 seconds. 49 already precompiled.
  1 dependency had output during precompilation:
┌ PyBoltz
│  CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PyBoltz/PGqPe/CondaPkg.toml
│      CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/83z4q/CondaPkg.toml
│      CondaPkg Found dependencies: /home/pkgeval/.julia/packages/CondaPkg/0UqYV/CondaPkg.toml
│      CondaPkg Resolving changes
│               + boltz (pip)
│               + libstdcxx
│               + libstdcxx-ng
│               + python
│               + uv
│      CondaPkg Initialising pixi
│               │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi
│               │ init
│               │ --format pixi
│               └ /tmp/jl_emvh7S/.CondaPkg
│  ✔ Created /tmp/jl_emvh7S/.CondaPkg/pixi.toml
│      CondaPkg Wrote /tmp/jl_emvh7S/.CondaPkg/pixi.toml
│               │ [dependencies]
│               │ libstdcxx = ">=3.4,<14.0"
│               │ uv = ">=0.4"
│               │ libstdcxx-ng = ">=3.4,<14.0"
│               │ 
│               │     [dependencies.python]
│               │     channel = "conda-forge"
│               │     build = "*cp*"
│               │     version = ">=3.10,!=3.14.0,!=3.14.1,<4, >=3.10,<3.13"
│               │ 
│               │ [project]
│               │ name = ".CondaPkg"
│               │ platforms = ["linux-64"]
│               │ channels = ["conda-forge"]
│               │ channel-priority = "strict"
│               │ description = "automatically generated by CondaPkg.jl"
│               │ 
│               │ [pypi-dependencies.boltz]
│               │ extras = ["cuda"]
│               └ version = "~=2.2"
│      CondaPkg Installing packages
│               │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi
│               │ install
│               └ --manifest-path /tmp/jl_emvh7S/.CondaPkg/pixi.toml
│  ✔ The default environment has been installed.
└  

Precompilation completed after 113.8s


################################################################################
# Testing
#

     Testing PyBoltz
      Status `/tmp/jl_PxvTm9/Project.toml`
  [00701ae9] BioAlignments v3.1.0
  [7e6ae17a] BioSequences v3.5.1
  [de9282ab] BioStructures v4.7.1
  [0bca4874] PyBoltz v0.2.2
  [6e960f36] TMscore v0.1.0
  [8dfed614] Test
      Status `/tmp/jl_PxvTm9/Manifest.toml`
  [00701ae9] BioAlignments v3.1.0
  [47718e42] BioGenerics v0.1.5
  [7e6ae17a] BioSequences v3.5.1
  [de9282ab] BioStructures v4.7.1
  [3c28c6f8] BioSymbols v5.2.0
  [944b1d66] CodecZlib v0.7.8
  [34da2185] Compat v4.18.1
  [992eb4ea] CondaPkg v0.2.33
  [9a962f9c] DataAPI v1.16.0
  [e2d170a0] DataValueInterfaces v1.0.0
  [1fa38f19] Format v1.3.7
  [524e6230] IntervalTrees v1.1.0
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.1
  [0f8b85d8] JSON3 v1.14.3
  [1914dd2f] MacroTools v0.5.16
  [0b3b1443] MicroMamba v0.1.14
  [bac558e1] OrderedCollections v1.8.1
  [69de0a69] Parsers v2.8.3
  [fa939f87] Pidfile v1.3.0
⌅ [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.5.1
  [0bca4874] PyBoltz v0.2.2
  [6099a3de] PythonCall v0.9.31
  [3cdcf5f2] RecipesBase v1.3.4
  [6c6a2e73] Scratch v1.3.0
  [69024149] StringEncodings v0.3.7
  [856f2bd8] StructTypes v1.11.0
  [6e960f36] TMscore v0.1.0
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.1
  [3bb67fe8] TranscodingStreams v0.11.3
  [7200193e] Twiddle v1.1.2
  [e17b2a0c] UnsafePointers v1.0.0
  [ddb6d928] YAML v0.4.16
  [94ce4f54] Libiconv_jll v1.18.0+0
  [1d8dad79] TMscore_jll v1.0.0+0
⌅ [f8abcde7] micromamba_jll v1.5.12+0
  [4d7b5844] pixi_jll v0.41.3+0
  [0dad84c5] ArgTools v1.1.1
  [56f22d72] Artifacts
  [2a0f44e3] Base64
  [ade2ca70] Dates
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching
  [b77e0a4c] InteractiveUtils
  [4af54fe1] LazyArtifacts
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2
  [8f399da3] Libdl
  [37e2e46d] LinearAlgebra
  [56ddb016] Logging
  [d6f4376e] Markdown
  [a63ad114] Mmap
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.10.0
  [de0858da] Printf
  [3fa0cd96] REPL
  [9a3f8284] Random
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization
  [6462fe0b] Sockets
  [2f01184e] SparseArrays v1.10.0
  [10745b16] Statistics v1.10.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test
  [cf7118a7] UUIDs
  [4ec0a83e] Unicode
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] LibCURL_jll v8.4.0+0
  [e37daf67] LibGit2_jll v1.6.4+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.1010+0
  [14a3606d] MozillaCACerts_jll v2025.12.2
  [4536629a] OpenBLAS_jll v0.3.23+5
  [bea87d4a] SuiteSparse_jll v7.2.1+1
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.52.0+1
  [3f19e933] p7zip_jll v17.4.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
    CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PyBoltz/PGqPe/CondaPkg.toml
    CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/83z4q/CondaPkg.toml
    CondaPkg Found dependencies: /home/pkgeval/.julia/packages/CondaPkg/0UqYV/CondaPkg.toml
    CondaPkg Resolving changes
             + boltz (pip)
             + libstdcxx
             + libstdcxx-ng
             + python
             + uv
    CondaPkg Initialising pixi
             │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi
             │ init
             │ --format pixi
             └ /tmp/jl_PxvTm9/.CondaPkg
✔ Created /tmp/jl_PxvTm9/.CondaPkg/pixi.toml
    CondaPkg Wrote /tmp/jl_PxvTm9/.CondaPkg/pixi.toml
             │ [dependencies]
             │ libstdcxx = ">=3.4,<14.0"
             │ uv = ">=0.4"
             │ libstdcxx-ng = ">=3.4,<14.0"
             │ 
             │     [dependencies.python]
             │     channel = "conda-forge"
             │     build = "*cp*"
             │     version = ">=3.10,!=3.14.0,!=3.14.1,<4, >=3.10,<3.13"
             │ 
             │ [project]
             │ name = ".CondaPkg"
             │ platforms = ["linux-64"]
             │ channels = ["conda-forge"]
             │ channel-priority = "strict"
             │ description = "automatically generated by CondaPkg.jl"
             │ 
             │ [pypi-dependencies.boltz]
             │ extras = ["cuda"]
             └ version = "~=2.2"
    CondaPkg Installing packages
             │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi
             │ install
             └ --manifest-path /tmp/jl_PxvTm9/.CondaPkg/pixi.toml
✔ The default environment has been installed.
[ Info: Downloading file from PDB: 1TIT
Running on CPU, this will be slow. Consider using a GPU.
Seed set to 0
Downloading the CCD data to /home/pkgeval/.julia/scratchspaces/0bca4874-a2b8-4dca-bc03-d2d86e344f1f/boltz_cache/mols.tar. This may take a bit of time. You may change the cache directory with the --cache flag.
Extracting the CCD data to /home/pkgeval/.julia/scratchspaces/0bca4874-a2b8-4dca-bc03-d2d86e344f1f/boltz_cache/mols. This may take a bit of time. You may change the cache directory with the --cache flag.
Downloading the Boltz-2 weights to /home/pkgeval/.julia/scratchspaces/0bca4874-a2b8-4dca-bc03-d2d86e344f1f/boltz_cache/boltz2_conf.ckpt. You may change the cache directory with the --cache flag.
Downloading the Boltz-2 affinity weights to /home/pkgeval/.julia/scratchspaces/0bca4874-a2b8-4dca-bc03-d2d86e344f1f/boltz_cache/boltz2_aff.ckpt. You may change the cache directory with the --cache flag.
Checking input data.
Processing 1 inputs with 1 threads.

  0%|          | 0/1 [00:00<?, ?it/s]Found explicit empty MSA for some proteins, will run these in single sequence mode. Keep in mind that the model predictions will be suboptimal without an MSA.

100%|██████████| 1/1 [00:00<00:00,  3.69it/s]
100%|██████████| 1/1 [00:00<00:00,  3.69it/s]
Using bfloat16 Automatic Mixed Precision (AMP)
GPU available: False, used: False
TPU available: False, using: 0 TPU cores
HPU available: False, using: 0 HPUs
/tmp/jl_PxvTm9/.CondaPkg/.pixi/envs/default/lib/python3.12/site-packages/pytorch_lightning/trainer/connectors/logger_connector/logger_connector.py:76: Starting from v1.9.0, `tensorboardX` has been removed as a dependency of the `pytorch_lightning` package, due to potential conflicts with other packages in the ML ecosystem. For this reason, `logger=True` will use `CSVLogger` as the default logger, unless the `tensorboard` or `tensorboardX` packages are found. Please `pip install lightning[extra]` or one of them to enable TensorBoard support by default
Running structure prediction for 1 input.
/tmp/jl_PxvTm9/.CondaPkg/.pixi/envs/default/lib/python3.12/site-packages/pytorch_lightning/utilities/migration/utils.py:56: The loaded checkpoint was produced with Lightning v2.5.0.post0, which is newer than your current Lightning version: v2.5.0
/tmp/jl_PxvTm9/.CondaPkg/.pixi/envs/default/lib/python3.12/site-packages/torch/utils/data/dataloader.py:424: UserWarning: This DataLoader will create 2 worker processes in total. Our suggested max number of worker in current system is 1, which is smaller than what this DataLoader is going to create. Please be aware that excessive worker creation might get DataLoader running slow or even freeze, lower the worker number to avoid potential slowness/freeze if necessary.
  self.check_worker_number_rationality()
/tmp/jl_PxvTm9/.CondaPkg/.pixi/envs/default/lib/python3.12/site-packages/pytorch_lightning/utilities/_pytree.py:21: `isinstance(treespec, LeafSpec)` is deprecated, use `isinstance(treespec, TreeSpec) and treespec.is_leaf()` instead.
/tmp/jl_PxvTm9/.CondaPkg/.pixi/envs/default/lib/python3.12/site-packages/torch/utils/data/dataloader.py:432: UserWarning: This DataLoader will create 2 worker processes in total. Our suggested max number of worker in current system is 1, which is smaller than what this DataLoader is going to create. Please be aware that excessive worker creation might get DataLoader running slow or even freeze, lower the worker number to avoid potential slowness/freeze if necessary.
  self.check_worker_number_rationality()
/tmp/jl_PxvTm9/.CondaPkg/.pixi/envs/default/lib/python3.12/site-packages/torch/utils/data/dataloader.py:1118: UserWarning: 'pin_memory' argument is set as true but no accelerator is found, then device pinned memory won't be used.
  super().__init__(loader)

Predicting: |          | 0/? [00:00<?, ?it/s]
Predicting:   0%|          | 0/1 [00:00<?, ?it/s]
Predicting DataLoader 0:   0%|          | 0/1 [00:00<?, ?it/s]
======================================================================================
Information request received. A stacktrace will print followed by a 1.0 second profile
======================================================================================

cmd: /opt/julia/bin/julia 150 running 0 of 1

signal (10): User defined signal 1
epoll_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/epoll.c:236
uv_run at /workspace/srcdir/libuv/src/unix/core.c:400
ijl_task_get_next at /source/src/partr.c:478
poptask at ./task.jl:999
wait at ./task.jl:1008
task_done_hook at ./task.jl:682
jfptr_task_done_hook_75472.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2878 [inlined]
ijl_apply_generic at /source/src/gf.c:3079
jl_apply at /source/src/julia.h:1982 [inlined]
jl_finish_task at /source/src/task.c:323
start_task at /source/src/task.c:1264
unknown function (ip: (nil))

==============================================================
Profile collected. A report will print at the next yield point
==============================================================


======================================================================================
Information request received. A stacktrace will print followed by a 1.0 second profile
======================================================================================

cmd: /opt/julia/bin/julia 1 running 0 of 1

signal (10): User defined signal 1
epoll_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/epoll.c:236
uv_run at /workspace/srcdir/libuv/src/unix/core.c:400
ijl_task_get_next at /source/src/partr.c:478
poptask at ./task.jl:999
wait at ./task.jl:1008
#wait#647 at ./condition.jl:130
wait at ./condition.jl:125 [inlined]
wait at ./process.jl:661
jfptr_wait_74856.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2878 [inlined]
ijl_apply_generic at /source/src/gf.c:3079
subprocess_handler at /source/usr/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2048
#130 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1992
withenv at ./env.jl:257
#117 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1840
with_temp_env at /source/usr/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1721
#115 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1810
#mktempdir#24 at ./file.jl:766
unknown function (ip: 0x733efdb5c890)
_jl_invoke at /source/src/gf.c:2878 [inlined]
ijl_apply_generic at /source/src/gf.c:3079
mktempdir at ./file.jl:762
mktempdir at ./file.jl:762 [inlined]
#sandbox#114 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1768
sandbox at /source/usr/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1759
unknown function (ip: 0x733efdb5522d)
_jl_invoke at /source/src/gf.c:2878 [inlined]
ijl_apply_generic at /source/src/gf.c:3079
#test#127 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1971
test at /source/usr/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined]
#test#146 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/API.jl:444
test at /source/usr/share/julia/stdlib/v1.10/Pkg/src/API.jl:423
unknown function (ip: 0x733efdb54d20)
_jl_invoke at /source/src/gf.c:2878 [inlined]
ijl_apply_generic at /source/src/gf.c:3079
#test#77 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/API.jl:159
unknown function (ip: 0x733efdb545e0)
_jl_invoke at /source/src/gf.c:2878 [inlined]
ijl_apply_generic at /source/src/gf.c:3079
test at /source/usr/share/julia/stdlib/v1.10/Pkg/src/API.jl:148
#test#75 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined]
test at /source/usr/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined]
#test#74 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined]
test at /source/usr/share/julia/stdlib/v1.10/Pkg/src/API.jl:146
unknown function (ip: 0x733efdb50cd9)
_jl_invoke at /source/src/gf.c:2878 [inlined]
ijl_apply_generic at /source/src/gf.c:3079
jl_apply at /source/src/julia.h:1982 [inlined]
do_call at /source/src/interpreter.c:126
eval_value at /source/src/interpreter.c:223
eval_stmt_value at /source/src/interpreter.c:174 [inlined]
eval_body at /source/src/interpreter.c:635
eval_body at /source/src/interpreter.c:544
eval_body at /source/src/interpreter.c:544
jl_interpret_toplevel_thunk at /source/src/interpreter.c:775
jl_toplevel_eval_flex at /source/src/toplevel.c:934
jl_toplevel_eval_flex at /source/src/toplevel.c:877
ijl_toplevel_eval_in at /source/src/toplevel.c:985
eval at ./boot.jl:385 [inlined]
include_string at ./loading.jl:2149
_jl_invoke at /source/src/gf.c:2878 [inlined]
ijl_apply_generic at /source/src/gf.c:3079
_include at ./loading.jl:2209
include at ./Base.jl:495
jfptr_include_46673.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2878 [inlined]
ijl_apply_generic at /source/src/gf.c:3079
exec_options at ./client.jl:316
_start at ./client.jl:550
jfptr__start_83133.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2878 [inlined]
ijl_apply_generic at /source/src/gf.c:3079
jl_apply at /source/src/julia.h:1982 [inlined]
true_main at /source/src/jlapi.c:582
jl_repl_entrypoint at /source/src/jlapi.c:731
main at /source/cli/loader_exe.c:58
unknown function (ip: 0x733efe957249)
__libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
unknown function (ip: 0x4010b8)
unknown function (ip: (nil))

==============================================================
Profile collected. A report will print at the next yield point
==============================================================

┌ Warning: There were no samples collected in one or more groups.
│ This may be due to idle threads, or you may need to run your
│ program longer (perhaps by running it multiple times),
│ or adjust the delay between samples with `Profile.init()`.
└ @ Profile /opt/julia/share/julia/stdlib/v1.10/Profile/src/Profile.jl:1225
Overhead ╎ [+additional indent] Count File:Line; Function
=========================================================
Thread 1 Task 0x0000733ef1bfc010 Total snapshots: 1. Utilization: 0%
 ╎1 @Base/client.jl:550; _start()
 ╎ 1 @Base/client.jl:316; exec_options(opts::Base.JLOptions)
 ╎  1 @Base/Base.jl:495; include(mod::Module, _path::String)
 ╎   1 @Base/loading.jl:2209; _include(mapexpr::Function, mod::Module, _path::S…
 ╎    1 @Base/loading.jl:2149; include_string(mapexpr::typeof(identity), mod::M…
 ╎     1 @Base/boot.jl:385; eval
 ╎    ╎ 1 @Pkg/src/API.jl:146; kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(…
 ╎    ╎  1 @Pkg/src/API.jl:146; #test#74
 ╎    ╎   1 @Pkg/src/API.jl:147; test
 ╎    ╎    1 @Pkg/src/API.jl:147; #test#75
 ╎    ╎     1 @Pkg/src/API.jl:148; kwcall(::@NamedTuple{julia_args::Cmd}, ::typ…
 ╎    ╎    ╎ 1 @Pkg/src/API.jl:159; test(pkgs::Vector{Pkg.Types.PackageSpec}; i…
 ╎    ╎    ╎  1 @Pkg/src/API.jl:423; kwcall(::@NamedTuple{julia_args::Cmd, io::…
 ╎    ╎    ╎   1 @Pkg/src/API.jl:444; test(ctx::Pkg.Types.Context, pkgs::Vector…
 ╎    ╎    ╎    1 …/src/Operations.jl:1915; test
 ╎    ╎    ╎     1 …src/Operations.jl:1971; test(ctx::Pkg.Types.Context, pkgs::…
 ╎    ╎    ╎    ╎ 1 …src/Operations.jl:1759; kwcall(::@NamedTuple{preferences::…
 ╎    ╎    ╎    ╎  1 …src/Operations.jl:1768; sandbox(fn::Function, ctx::Pkg.Ty…
 ╎    ╎    ╎    ╎   1 @Base/file.jl:762; mktempdir
 ╎    ╎    ╎    ╎    1 @Base/file.jl:762; mktempdir(fn::Function, parent::Strin…
 ╎    ╎    ╎    ╎     1 @Base/file.jl:766; mktempdir(fn::Pkg.Operations.var"#11…
 ╎    ╎    ╎    ╎    ╎ 1 …c/Operations.jl:1810; (::Pkg.Operations.var"#115#120"…
 ╎    ╎    ╎    ╎    ╎  1 …c/Operations.jl:1721; with_temp_env(fn::Pkg.Operatio…
 ╎    ╎    ╎    ╎    ╎   1 …/Operations.jl:1840; (::Pkg.Operations.var"#117#122…
 ╎    ╎    ╎    ╎    ╎    1 @Base/env.jl:257; withenv(::Pkg.Operations.var"#130…
 ╎    ╎    ╎    ╎    ╎     1 …Operations.jl:1992; (::Pkg.Operations.var"#130#13…
 ╎    ╎    ╎    ╎    ╎    ╎ 1 …Operations.jl:2048; subprocess_handler(cmd::Cmd,…
 ╎    ╎    ╎    ╎    ╎    ╎  1 …se/process.jl:661; wait(x::Base.Process)
 ╎    ╎    ╎    ╎    ╎    ╎   1 …/condition.jl:125; wait
 ╎    ╎    ╎    ╎    ╎    ╎    1 …condition.jl:130; wait(c::Base.GenericConditi…
 ╎    ╎    ╎    ╎    ╎    ╎     1 …ase/task.jl:1008; wait()
 ╎    ╎    ╎    ╎    ╎    ╎    ╎ 1 …ase/task.jl:999; poptask(W::Base.IntrusiveL…

┌ Warning: There were no samples collected in one or more groups.
│ This may be due to idle threads, or you may need to run your
│ program longer (perhaps by running it multiple times),
│ or adjust the delay between samples with `Profile.init()`.
└ @ Profile /opt/julia/share/julia/stdlib/v1.10/Profile/src/Profile.jl:1225
Overhead ╎ [+additional indent] Count File:Line; Function
=========================================================
Thread 1 Task 0x000070ae8b910c90 Total snapshots: 175. Utilization: 0%
   ╎175 @Base/task.jl:682; task_done_hook(t::Task)
   ╎ 175 @Base/task.jl:1008; wait()
174╎  175 @Base/task.jl:999; poptask(W::Base.IntrusiveLinkedListSynchronized{Ta…


[150] signal (15): Terminated
in expression starting at /home/pkgeval/.julia/packages/PyBoltz/PGqPe/test/runtests.jl:13
epoll_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/epoll.c:236
uv_run at /workspace/srcdir/libuv/src/unix/core.c:400
ijl_task_get_next at /source/src/partr.c:478

[1] signal (15): Terminated
in expression starting at /PkgEval.jl/scripts/evaluate.jl:214
epoll_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/epoll.c:236
uv_run at /workspace/srcdir/libuv/src/unix/core.c:400
ijl_task_get_next at /source/src/partr.c:478
[rank: 0] Received SIGTERM: 15
poptask at ./task.jl:999
poptask at ./task.jl:999
wait at ./task.jl:1008
wait at ./task.jl:1008
#wait#647 at ./condition.jl:130
#wait#647 at ./condition.jl:130
wait at ./condition.jl:125 [inlined]
_trywait at ./asyncevent.jl:142
wait at ./condition.jl:125 [inlined]
_trywait at ./asyncevent.jl:142
wait at ./asyncevent.jl:159 [inlined]
profile_printing_listener at ./Base.jl:572
wait at ./asyncevent.jl:159 [inlined]
profile_printing_listener at ./Base.jl:572
#1058 at ./Base.jl:608
#1058 at ./Base.jl:608
jfptr_YY.1058_85352.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2878 [inlined]
ijl_apply_generic at /source/src/gf.c:3079
jfptr_YY.1058_85352.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2878 [inlined]
ijl_apply_generic at /source/src/gf.c:3079
jl_apply at /source/src/julia.h:1982 [inlined]
start_task at /source/src/task.c:1253
unknown function (ip: (nil))
Allocations: 15463922 (Pool: 15418625; Big: 45297); GC: 11
jl_apply at /source/src/julia.h:1982 [inlined]
start_task at /source/src/task.c:1253
unknown function (ip: (nil))
Allocations: 10700436 (Pool: 10691351; Big: 9085); GC: 16

PkgEval terminated after 2723.44s: test duration exceeded the time limit