Package evaluation to test NCDatasets on Julia 1.10.10 (c8be17dcfd*) started at 2026-02-02T19:28:29.005 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.10` Set-up completed after 5.37s ################################################################################ # Installation # Installing NCDatasets... Resolving package versions... Updating `~/.julia/environments/v1.10/Project.toml` [85f8d34a] + NCDatasets v0.14.11 Updating `~/.julia/environments/v1.10/Manifest.toml` [179af706] + CFTime v0.2.5 [1fbeeb36] + CommonDataModel v0.4.2 [187b0558] + ConstructionBase v1.6.0 [864edb3b] + DataStructures v0.19.3 [3c3547ce] + DiskArrays v0.4.19 [692b3bcd] + JLLWrappers v1.7.1 [8ac3fa9e] + LRUCache v1.6.2 [3da0fdf6] + MPIPreferences v0.1.11 [85f8d34a] + NCDatasets v0.14.11 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [21216c6a] + Preferences v1.5.1 [0b7ba130] + Blosc_jll v1.21.7+0 [6e34b625] + Bzip2_jll v1.0.9+0 ⌅ [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [5ced341a] + Lz4_jll v1.10.1+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [7243133f] + NetCDF_jll v401.900.300+0 [fe0851c0] + OpenMPI_jll v5.0.9+0 [458c3c95] + OpenSSL_jll v3.5.5+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [ffd25f8a] + XZ_jll v5.8.2+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [3161d3a3] + Zstd_jll v1.5.7+1 [477f73a3] + libaec_jll v1.1.5+0 [337d8026] + libzip_jll v1.11.3+0 [0dad84c5] + ArgTools v1.1.1 [56f22d72] + Artifacts [2a0f44e3] + Base64 [ade2ca70] + Dates [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching [b77e0a4c] + InteractiveUtils [4af54fe1] + LazyArtifacts [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [56ddb016] + Logging [d6f4376e] + Markdown [a63ad114] + Mmap [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.10.0 [de0858da] + Printf [3fa0cd96] + REPL [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [6462fe0b] + Sockets [2f01184e] + SparseArrays v1.10.0 [10745b16] + Statistics v1.10.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.4.0+0 [e37daf67] + LibGit2_jll v1.6.4+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.23+5 [bea87d4a] + SuiteSparse_jll v7.2.1+1 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.52.0+1 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 15.94s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 3197.3 ms ✓ NCDatasets → NCDatasetsMPIExt 1 dependency successfully precompiled in 5 seconds. 49 already precompiled. Precompilation completed after 28.12s ################################################################################ # Testing # Testing NCDatasets Status `/tmp/jl_BhJwcg/Project.toml` [1fbeeb36] CommonDataModel v0.4.2 [864edb3b] DataStructures v0.19.3 [3c3547ce] DiskArrays v0.4.19 [8197267c] IntervalSets v0.7.13 [da04e1cc] MPI v0.20.23 [85f8d34a] NCDatasets v0.14.11 [ade2ca70] Dates [de0858da] Printf [9a3f8284] Random [8dfed614] Test Status `/tmp/jl_BhJwcg/Manifest.toml` [179af706] CFTime v0.2.5 [1fbeeb36] CommonDataModel v0.4.2 [187b0558] ConstructionBase v1.6.0 [864edb3b] DataStructures v0.19.3 [3c3547ce] DiskArrays v0.4.19 [ffbed154] DocStringExtensions v0.9.5 [8197267c] IntervalSets v0.7.13 [692b3bcd] JLLWrappers v1.7.1 [8ac3fa9e] LRUCache v1.6.2 [da04e1cc] MPI v0.20.23 [3da0fdf6] MPIPreferences v0.1.11 [85f8d34a] NCDatasets v0.14.11 [6fe1bfb0] OffsetArrays v1.17.0 [bac558e1] OrderedCollections v1.8.1 [eebad327] PkgVersion v0.3.3 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.5.1 [ae029012] Requires v1.3.1 [0b7ba130] Blosc_jll v1.21.7+0 [6e34b625] Bzip2_jll v1.0.9+0 ⌅ [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.2+0 [94ce4f54] Libiconv_jll v1.18.0+0 [5ced341a] Lz4_jll v1.10.1+0 [7cb0a576] MPICH_jll v4.3.2+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [7243133f] NetCDF_jll v401.900.300+0 [fe0851c0] OpenMPI_jll v5.0.9+0 [458c3c95] OpenSSL_jll v3.5.5+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [ffd25f8a] XZ_jll v5.8.2+0 [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0 [3161d3a3] Zstd_jll v1.5.7+1 [477f73a3] libaec_jll v1.1.5+0 [337d8026] libzip_jll v1.11.3+0 [0dad84c5] ArgTools v1.1.1 [56f22d72] Artifacts [2a0f44e3] Base64 [ade2ca70] Dates [8ba89e20] Distributed [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching [b77e0a4c] InteractiveUtils [4af54fe1] LazyArtifacts [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 [8f399da3] Libdl [37e2e46d] LinearAlgebra [56ddb016] Logging [d6f4376e] Markdown [a63ad114] Mmap [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.10.0 [de0858da] Printf [3fa0cd96] REPL [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [6462fe0b] Sockets [2f01184e] SparseArrays v1.10.0 [10745b16] Statistics v1.10.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.4.0+0 [e37daf67] LibGit2_jll v1.6.4+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.1010+0 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.23+5 [bea87d4a] SuiteSparse_jll v7.2.1+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.52.0+1 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... NetCDF library: /home/pkgeval/.julia/artifacts/2dbbcf6f14a16f5b58c7aff3de7a9aa8d2134300/lib/libnetcdf.so NetCDF version: 4.9.3 of Mar 9 2025 16:33:53 $ Test Summary: | Pass Total Time NCDatasets | 908 908 5m49.6s Test Summary: | Pass Total Time NetCDF4 groups | 10 10 3.3s Test Summary: | Pass Total Time Variable-length arrays | 22 22 3.1s Test Summary: | Pass Total Time Compound types | 16 16 3.3s Test Summary: | Pass Total Time Time and calendars | 26 26 3.9s Test Summary: | Pass Total Time Multi-file datasets | 83 83 2m06.3s WARNING: Method definition example_file(Any, Any) in module Main at /home/pkgeval/.julia/packages/NCDatasets/WjwTE/test/test_multifile.jl:6 overwritten at /home/pkgeval/.julia/packages/NCDatasets/WjwTE/test/test_defer.jl:5. Test Summary: | Pass Total Time Deferred datasets | 13 13 3.6s Test Summary: | Pass Total Time @select macro | 46 46 1m15.4s Fatal error in internal_Init_thread: Other MPI error, error stack: internal_Init_thread(71)...........: MPI_Init_thread(argc=(nil), argv=(nil), required=2, provided=0x7ffe9c443860) failed MPII_Init_thread(257)..............: MPID_Init(65)......................: init_world(169)....................: channel initialization failed MPIDI_CH3_Init(84).................: MPID_nem_init(314).................: MPID_nem_tcp_init(175).............: MPID_nem_tcp_get_business_card(400): GetSockInterfaceAddr(373)..........: gethostbyname failed, NCDatasets-primary-NSnjnrbO (errno 1) Fatal error in internal_Init_thread: Other MPI error, error stack: internal_Init_thread(71)...........: MPI_Init_thread(argc=(nil), argv=(nil), required=2, provided=0x7ffd0a7a2800) failed MPII_Init_thread(257)..............: MPID_Init(65)......................: init_world(169)....................: channel initialization failed MPIDI_CH3_Init(84).................: MPID_nem_init(314).................: MPID_nem_tcp_init(175).............: MPID_nem_tcp_get_business_card(400): GetSockInterfaceAddr(373)..........: gethostbyname failed, NCDatasets-primary-NSnjnrbO (errno 1) MPI: Error During Test at /home/pkgeval/.julia/packages/NCDatasets/WjwTE/test/runtests.jl:78 Got exception outside of a @test LoadError: failed process: Process(setenv(`/home/pkgeval/.julia/artifacts/117d9048128625bb3418b0b4cca48739c5d28740/bin/mpiexec -n 4 /opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so --depwarn=yes --check-bounds=yes -g1 --startup-file=no --pkgimages=no --startup-file=no /home/pkgeval/.julia/packages/NCDatasets/WjwTE/test/test_mpi_script.jl /tmp/jl_lan4ZEzYX4`,["LANG=C.UTF-8", "PYTHON=", "PATH=/home/pkgeval/.julia/artifacts/4a89e14d2f652ad45bcc093d040c97fbcc1a3669/bin:/home/pkgeval/.julia/artifacts/fddb41451df711c595969c8571404433623c75f6/bin:/home/pkgeval/.julia/artifacts/117d9048128625bb3418b0b4cca48739c5d28740/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin:/opt/julia/bin", "OPENBLAS_MAIN_FREE=1", "JULIA_CPU_THREADS=1", "JULIA_NUM_PRECOMPILE_TASKS=1", "DISPLAY=:1", "JULIA_LOAD_PATH=@:/tmp/jl_BhJwcg", "UCX_MEMTYPE_CACHE=no", "PKGEVAL=true", "OPENBLAS_NUM_THREADS=1", "UCX_ERROR_SIGNALS=SIGILL,SIGBUS,SIGFPE", "LD_LIBRARY_PATH=/opt/julia/bin/../lib/julia:/home/pkgeval/.julia/artifacts/5acd766faaca59c3c1f3cfa67e2bf6dcf1e3e883/lib:/home/pkgeval/.julia/artifacts/4a89e14d2f652ad45bcc093d040c97fbcc1a3669/lib:/home/pkgeval/.julia/artifacts/02f7ccbf4bbe00dcdd34eba3f36cd5e8f76f1769/lib:/home/pkgeval/.julia/artifacts/fddb41451df711c595969c8571404433623c75f6/lib:/home/pkgeval/.julia/artifacts/117d9048128625bb3418b0b4cca48739c5d28740/lib:/opt/julia/bin/../lib/julia:/opt/julia/bin/../lib", "HOME=/home/pkgeval", "CI=true", "JULIA_PKG_PRECOMPILE_AUTO=0", "JULIA_PKGEVAL=true", "JULIA_DEPOT_PATH=/home/pkgeval/.julia:/usr/local/share/julia:", "R_HOME=*", "JULIA_NUM_THREADS=1"]), ProcessExited(15)) [15] Stacktrace: [1] pipeline_error @ ./process.jl:565 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:480 [3] run(::Cmd) @ Base ./process.jl:477 [4] top-level scope @ ~/.julia/packages/NCDatasets/WjwTE/test/test_mpi_netcdf.jl:9 [5] include(fname::String) @ Base.MainInclude ./client.jl:487 [6] macro expansion @ ~/.julia/packages/NCDatasets/WjwTE/test/runtests.jl:82 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1582 [inlined] [8] top-level scope @ ~/.julia/packages/NCDatasets/WjwTE/test/runtests.jl:81 [9] include(fname::String) @ Base.MainInclude ./client.jl:487 [10] top-level scope @ none:6 in expression starting at /home/pkgeval/.julia/packages/NCDatasets/WjwTE/test/test_mpi_netcdf.jl:9 Test Summary: | Error Total Time MPI | 1 1 18.4s ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/NCDatasets/WjwTE/test/runtests.jl:78 Testing failed after 592.72s ERROR: LoadError: Package NCDatasets errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034 [3] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 664.83s: package tests unexpectedly errored