Package evaluation to test MolecularMinimumDistances on Julia 1.10.10 (c8be17dcfd*) started at 2026-02-02T16:13:28.324


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.10`

Set-up completed after 5.3s


################################################################################
# Installation
#

Installing MolecularMinimumDistances...
   Resolving package versions...
    Updating `~/.julia/environments/v1.10/Project.toml`
  [46954fcc] + MolecularMinimumDistances v0.4.5
    Updating `~/.julia/environments/v1.10/Manifest.toml`
⌅ [69e1c6dd] + CellListMap v0.8.32
  [34da2185] + Compat v4.18.1
  [187b0558] + ConstructionBase v1.6.0
  [ffbed154] + DocStringExtensions v0.9.5
  [1914dd2f] + MacroTools v0.5.16
  [46954fcc] + MolecularMinimumDistances v0.4.5
  [bac558e1] + OrderedCollections v1.8.1
  [d96e819e] + Parameters v0.12.3
⌅ [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.5.1
  [92933f4c] + ProgressMeter v1.11.0
  [efcf1570] + Setfield v1.1.2
  [90137ffa] + StaticArrays v1.9.16
  [1e83bf80] + StaticArraysCore v1.4.4
⌅ [1c621080] + TestItems v0.1.1
  [3a884ed6] + UnPack v1.0.2
  [56f22d72] + Artifacts
  [ade2ca70] + Dates
  [8ba89e20] + Distributed
  [9fa8497b] + Future
  [8f399da3] + Libdl
  [37e2e46d] + LinearAlgebra
  [de0858da] + Printf
  [9a3f8284] + Random
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization
  [6462fe0b] + Sockets
  [fa267f1f] + TOML v1.0.3
  [cf7118a7] + UUIDs
  [4ec0a83e] + Unicode
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [4536629a] + OpenBLAS_jll v0.3.23+5
  [8e850b90] + libblastrampoline_jll v5.11.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 8.92s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...
Precompiling packages...
           ✗ TestItemRunner
  21363.9 ms  ✓ CellListMap
   3505.2 ms  ✓ MolecularMinimumDistances
  2 dependencies successfully precompiled in 42 seconds. 20 already precompiled.
  1 dependency had output during precompilation:
┌ MolecularMinimumDistances
│  ┌ Warning: 
│  │ 
│  │ 
│  │ Interface changes in v0.8.30, for `PeriodicSystems` submodule of CellListMap.
│  │ 
│  │ From v0.8.30 on, the `PeriodicSystems` submodule is deprecated and will be removed in future versions.
│  │ (code that works in v0.8.XX series will work in v0.8.3X through compatibility functions).
│  │ 
│  │ The same functionality can be achieved by using directly the `CellListMap` module and the 
│  │ `ParticleSystem` data structure. 
│  │ 
│  │ To migrate to the new interface, replace the code:
│  │ 
│  │ using CellListMap.PeriodicSystems  => using CellListMap
│  │ system = PeriodicSystem(...)       => system = ParticleSystem(...)
│  │ 
│  │ The new `ParticleSystem` interface supports non-periodic systems, by
│  │ not setting the `unitcell` field in the system (or set `unitcell = nothing`).
│  │ 
│  │ Suppress this warning by setting: ENV["CELLLISTMAP_8.3_WARNING"] = "false"
│  │ 
│  └ @ CellListMap.PeriodicSystems
└  

ERROR: LoadError: The following 1 direct dependency failed to precompile:

TestItemRunner 

Failed to precompile TestItemRunner [f8b46487-2199-4994-9208-9a1283c18c0a] to "/home/pkgeval/.julia/compiled/v1.10/TestItemRunner/jl_kV3dRk".
ERROR: LoadError: UndefVarError: `@testmodule` not defined
Stacktrace:
 [1] include
   @ ./Base.jl:495 [inlined]
 [2] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
   @ Base ./loading.jl:2295
 [3] top-level scope
   @ stdin:4
in expression starting at /home/pkgeval/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:1
in expression starting at stdin:
in expression starting at /PkgEval.jl/scripts/precompile.jl:34

Precompilation failed after 55.15s



################################################################################
# Testing
#

     Testing MolecularMinimumDistances
      Status `/tmp/jl_FbRj20/Project.toml`
⌅ [4c88cf16] Aqua v0.6.7
⌅ [69e1c6dd] CellListMap v0.8.32
  [ffbed154] DocStringExtensions v0.9.5
  [46954fcc] MolecularMinimumDistances v0.4.5
  [90137ffa] StaticArrays v1.9.16
  [f8b46487] TestItemRunner v1.1.4
⌅ [1c621080] TestItems v0.1.1
  [8dfed614] Test
      Status `/tmp/jl_FbRj20/Manifest.toml`
⌅ [4c88cf16] Aqua v0.6.7
⌅ [69e1c6dd] CellListMap v0.8.32
  [34da2185] Compat v4.18.1
  [187b0558] ConstructionBase v1.6.0
  [ffbed154] DocStringExtensions v0.9.5
  [1914dd2f] MacroTools v0.5.16
  [46954fcc] MolecularMinimumDistances v0.4.5
  [bac558e1] OrderedCollections v1.8.1
  [d96e819e] Parameters v0.12.3
⌅ [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.5.1
  [92933f4c] ProgressMeter v1.11.0
  [efcf1570] Setfield v1.1.2
  [90137ffa] StaticArrays v1.9.16
  [1e83bf80] StaticArraysCore v1.4.4
  [f8b46487] TestItemRunner v1.1.4
⌅ [1c621080] TestItems v0.1.1
  [3a884ed6] UnPack v1.0.2
  [0dad84c5] ArgTools v1.1.1
  [56f22d72] Artifacts
  [2a0f44e3] Base64
  [ade2ca70] Dates
  [8ba89e20] Distributed
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching
  [9fa8497b] Future
  [b77e0a4c] InteractiveUtils
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2
  [8f399da3] Libdl
  [37e2e46d] LinearAlgebra
  [56ddb016] Logging
  [d6f4376e] Markdown
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.10.0
  [de0858da] Printf
  [3fa0cd96] REPL
  [9a3f8284] Random
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization
  [6462fe0b] Sockets
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test
  [cf7118a7] UUIDs
  [4ec0a83e] Unicode
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] LibCURL_jll v8.4.0+0
  [e37daf67] LibGit2_jll v1.6.4+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.1010+0
  [14a3606d] MozillaCACerts_jll v2025.12.2
  [4536629a] OpenBLAS_jll v0.3.23+5
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.52.0+1
  [3f19e933] p7zip_jll v17.4.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
ERROR: LoadError: UndefVarError: `@testmodule` not defined
Stacktrace:
 [1] include
   @ ./Base.jl:495 [inlined]
 [2] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
   @ Base ./loading.jl:2295
 [3] top-level scope
   @ stdin:4
in expression starting at /home/pkgeval/.julia/packages/TestItemRunner/ax5HJ/src/TestItemRunner.jl:1
in expression starting at stdin:4
ERROR: LoadError: Failed to precompile TestItemRunner [f8b46487-2199-4994-9208-9a1283c18c0a] to "/home/pkgeval/.julia/compiled/v1.10/TestItemRunner/jl_LyLKPg".
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:35
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)
    @ Base ./loading.jl:2542
  [3] compilecache
    @ ./loading.jl:2414 [inlined]
  [4] (::Base.var"#971#972"{Base.PkgId})()
    @ Base ./loading.jl:2047
  [5] mkpidlock(f::Base.var"#971#972"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93
  [6] #mkpidlock#6
    @ /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined]
  [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111
  [8] #invokelatest#2
    @ ./essentials.jl:894 [inlined]
  [9] invokelatest
    @ ./essentials.jl:889 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#971#972"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:3057
 [11] maybe_cachefile_lock
    @ ./loading.jl:3054 [inlined]
 [12] _require(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2043
 [13] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1885
 [14] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [15] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [16] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1876
 [17] macro expansion
    @ ./loading.jl:1863 [inlined]
 [18] macro expansion
    @ ./lock.jl:270 [inlined]
 [19] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1826
 [20] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [21] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [22] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1819
 [23] include(fname::String)
    @ Base.MainInclude ./client.jl:487
 [24] top-level scope
    @ none:6
in expression starting at /home/pkgeval/.julia/packages/MolecularMinimumDistances/wHQ7d/test/runtests.jl:1

Testing failed after 26.04s

ERROR: LoadError: Package MolecularMinimumDistances errored during testing
Stacktrace:
 [1] pkgerror(msg::String)
   @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70
 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
   @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034
 [3] test
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined]
 [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444
 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159
 [6] test
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined]
 [7] #test#74
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined]
 [8] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:223
in expression starting at /PkgEval.jl/scripts/evaluate.jl:214

PkgEval failed after 101.81s: package fails to precompile