Package evaluation to test JudiLing on Julia 1.10.10 (c8be17dcfd*) started at 2026-02-03T02:33:01.733 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.10` Set-up completed after 4.99s ################################################################################ # Installation # Installing JudiLing... Resolving package versions... Updating `~/.julia/environments/v1.10/Project.toml` [b43a184b] + JudiLing v1.0.1 Updating `~/.julia/environments/v1.10/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [7d9f7c33] + Accessors v0.1.43 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [a9b6321e] + Atomix v1.1.2 ⌅ [15f4f7f2] + AutoHashEquals v0.2.0 [fbb218c0] + BSON v0.3.9 [198e06fe] + BangBang v0.4.7 [9718e550] + Baselet v0.1.1 ⌅ [6e4b80f9] + BenchmarkTools v1.5.0 [d1d4a3ce] + BitFlags v0.1.9 [336ed68f] + CSV v0.10.15 [082447d4] + ChainRules v1.72.6 [d360d2e6] + ChainRulesCore v1.26.0 [944b1d66] + CodecZlib v0.7.8 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [f0e56b4a] + ConcurrentUtilities v2.5.0 [187b0558] + ConstructionBase v1.6.0 [6add18c4] + ContextVariablesX v0.1.3 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [124859b0] + DataDeps v0.7.13 [a93c6f00] + DataFrames v1.8.1 [2e981812] + DataLoaders v0.1.3 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.123 ⌅ [ffbed154] + DocStringExtensions v0.8.6 [c5bfea45] + Embeddings v0.4.6 [f151be2c] + EnzymeCore v0.8.18 [460bff9d] + ExceptionUnwrapping v0.1.11 [cc61a311] + FLoops v0.2.2 [b9860ae5] + FLoopsBase v0.1.1 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.16.0 ⌅ [587475ba] + Flux v0.16.7 [f6369f11] + ForwardDiff v1.3.2 [d9f16b24] + Functors v0.5.2 [46192b85] + GPUArraysCore v0.2.0 [92fee26a] + GZip v0.6.2 ⌅ [91feb7a0] + GoogleDrive v0.1.3 [cd3eb016] + HTTP v1.10.19 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [7869d1d1] + IRTools v0.4.15 [22cec73e] + InitialValues v0.3.1 [842dd82b] + InlineStrings v1.4.5 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [b43a184b] + JudiLing v1.0.1 [b14d175d] + JuliaVariables v0.2.4 [63c18a36] + KernelAbstractions v0.9.39 [b964fa9f] + LaTeXStrings v1.4.0 ⌅ [7f8f8fb0] + LearnBase v0.3.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [c2834f40] + MLCore v1.0.0 [7e8f7934] + MLDataDevices v1.17.4 ⌃ [9920b226] + MLDataPattern v0.5.4 [66a33bbf] + MLLabelUtils v0.5.7 [d8e11817] + MLStyle v0.4.17 [f1d291b0] + MLUtils v0.4.8 [1914dd2f] + MacroTools v0.5.16 [dbb5928d] + MappedArrays v0.4.3 [739be429] + MbedTLS v1.1.9 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [872c559c] + NNlib v0.9.33 [77ba4419] + NaNMath v1.1.3 [71a1bf82] + NameResolution v0.1.5 [0b1bfda6] + OneHotArrays v0.2.10 [4d8831e6] + OpenSSL v1.6.1 [3bd65402] + Optimisers v0.4.7 [bac558e1] + OrderedCollections v1.8.1 ⌃ [90014a1f] + PDMats v0.11.35 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.5.1 [8162dcfd] + PrettyPrint v0.2.0 [08abe8d2] + PrettyTables v3.1.2 [33c8b6b6] + ProgressLogging v0.1.6 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [c1ae055f] + RealDot v0.1.0 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [431bcebd] + SciMLPublic v1.0.1 [7e506255] + ScopedValues v1.5.0 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.9 [efcf1570] + Setfield v1.1.2 [605ecd9f] + ShowCases v0.1.0 [777ac1f9] + SimpleBufferStream v1.2.0 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] + SortingAlgorithms v1.2.2 [dc90abb0] + SparseInverseSubset v0.1.2 [276daf66] + SpecialFunctions v2.6.1 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.16 [1e83bf80] + StaticArraysCore v1.4.4 [82ae8749] + StatsAPI v1.8.0 ⌅ [2913bbd2] + StatsBase v0.33.21 [4c63d2b9] + StatsFuns v1.5.2 [892a3eda] + StringManipulation v0.4.2 [09ab397b] + StructArrays v0.7.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 ⌅ [b189fb0b] + ThreadPools v1.2.1 [3bb67fe8] + TranscodingStreams v0.11.3 [28d57a85] + Transducers v0.4.85 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [013be700] + UnsafeAtomics v0.3.0 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 [e88e6eb3] + Zygote v0.7.10 [700de1a5] + ZygoteRules v0.2.7 [458c3c95] + OpenSSL_jll v3.5.5+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.1.1 [56f22d72] + Artifacts [2a0f44e3] + Base64 [ade2ca70] + Dates [8ba89e20] + Distributed [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching [9fa8497b] + Future [b77e0a4c] + InteractiveUtils [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [56ddb016] + Logging [d6f4376e] + Markdown [a63ad114] + Mmap [ca575930] + NetworkOptions v1.2.0 [de0858da] + Printf [9abbd945] + Profile [3fa0cd96] + REPL [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [6462fe0b] + Sockets [2f01184e] + SparseArrays v1.10.0 [10745b16] + Statistics v1.10.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test [cf7118a7] + UUIDs [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.4.0+0 [e37daf67] + LibGit2_jll v1.6.4+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.23+5 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.2.1+1 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.52.0+1 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 9.97s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 11914.0 ms ✓ PyCall 9290.8 ms ✓ Distributions 23420.1 ms ✓ MLUtils 50376.4 ms ✓ Zygote 9714.3 ms ✓ NNlib → NNlibSpecialFunctionsExt 2926.2 ms ✓ Distributions → DistributionsTestExt 10503.0 ms ✓ Distributions → DistributionsChainRulesCoreExt 38035.0 ms ✓ MLDataDevices → MLUtilsExt 5419.8 ms ✓ Zygote → ZygoteDistancesExt 56213.3 ms ✓ MLDataDevices → ZygoteExt 14475.9 ms ✓ NNlib → NNlibForwardDiffExt 113810.0 ms ✓ Flux 96705.9 ms ✓ JudiLing 13 dependencies successfully precompiled in 476 seconds. 202 already precompiled. Precompilation completed after 530.09s ################################################################################ # Testing # Testing JudiLing Status `/tmp/jl_bNLCYM/Project.toml` [336ed68f] CSV v0.10.15 [a93c6f00] DataFrames v1.8.1 [2e981812] DataLoaders v0.1.3 ⌅ [587475ba] Flux v0.16.7 [b43a184b] JudiLing v1.0.1 [438e738f] PyCall v1.96.4 [1bc83da4] SafeTestsets v0.1.0 [37e2e46d] LinearAlgebra [2f01184e] SparseArrays v1.10.0 [8dfed614] Test Status `/tmp/jl_bNLCYM/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [7d9f7c33] Accessors v0.1.43 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [a9b6321e] Atomix v1.1.2 ⌅ [15f4f7f2] AutoHashEquals v0.2.0 [fbb218c0] BSON v0.3.9 [198e06fe] BangBang v0.4.7 [9718e550] Baselet v0.1.1 ⌅ [6e4b80f9] BenchmarkTools v1.5.0 [d1d4a3ce] BitFlags v0.1.9 [336ed68f] CSV v0.10.15 [082447d4] ChainRules v1.72.6 [d360d2e6] ChainRulesCore v1.26.0 [944b1d66] CodecZlib v0.7.8 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [f0e56b4a] ConcurrentUtilities v2.5.0 [8f4d0f93] Conda v1.10.3 [187b0558] ConstructionBase v1.6.0 [6add18c4] ContextVariablesX v0.1.3 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [124859b0] DataDeps v0.7.13 [a93c6f00] DataFrames v1.8.1 [2e981812] DataLoaders v0.1.3 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [8bb1440f] DelimitedFiles v1.9.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.123 ⌅ [ffbed154] DocStringExtensions v0.8.6 [c5bfea45] Embeddings v0.4.6 [f151be2c] EnzymeCore v0.8.18 [460bff9d] ExceptionUnwrapping v0.1.11 [cc61a311] FLoops v0.2.2 [b9860ae5] FLoopsBase v0.1.1 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.16.0 ⌅ [587475ba] Flux v0.16.7 [f6369f11] ForwardDiff v1.3.2 [d9f16b24] Functors v0.5.2 [46192b85] GPUArraysCore v0.2.0 [92fee26a] GZip v0.6.2 ⌅ [91feb7a0] GoogleDrive v0.1.3 [cd3eb016] HTTP v1.10.19 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [7869d1d1] IRTools v0.4.15 [22cec73e] InitialValues v0.3.1 [842dd82b] InlineStrings v1.4.5 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [b43a184b] JudiLing v1.0.1 [b14d175d] JuliaVariables v0.2.4 [63c18a36] KernelAbstractions v0.9.39 [b964fa9f] LaTeXStrings v1.4.0 ⌅ [7f8f8fb0] LearnBase v0.3.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [c2834f40] MLCore v1.0.0 [7e8f7934] MLDataDevices v1.17.4 ⌃ [9920b226] MLDataPattern v0.5.4 [66a33bbf] MLLabelUtils v0.5.7 [d8e11817] MLStyle v0.4.17 [f1d291b0] MLUtils v0.4.8 [1914dd2f] MacroTools v0.5.16 [dbb5928d] MappedArrays v0.4.3 [739be429] MbedTLS v1.1.9 [128add7d] MicroCollections v0.2.0 [e1d29d7a] Missings v1.2.0 [872c559c] NNlib 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SortingAlgorithms v1.2.2 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.6.1 [171d559e] SplittablesBase v0.1.15 [90137ffa] StaticArrays v1.9.16 [1e83bf80] StaticArraysCore v1.4.4 [82ae8749] StatsAPI v1.8.0 ⌅ [2913bbd2] StatsBase v0.33.21 [4c63d2b9] StatsFuns v1.5.2 [892a3eda] StringManipulation v0.4.2 [09ab397b] StructArrays v0.7.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 ⌅ [b189fb0b] ThreadPools v1.2.1 [3bb67fe8] TranscodingStreams v0.11.3 [28d57a85] Transducers v0.4.85 [5c2747f8] URIs v1.6.1 [3a884ed6] UnPack v1.0.2 [013be700] UnsafeAtomics v0.3.0 [81def892] VersionParsing v1.3.0 [ea10d353] WeakRefStrings v1.4.2 [76eceee3] WorkerUtilities v1.6.1 [e88e6eb3] Zygote v0.7.10 [700de1a5] ZygoteRules v0.2.7 [458c3c95] OpenSSL_jll v3.5.5+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.1 [56f22d72] Artifacts [2a0f44e3] Base64 [ade2ca70] Dates [8ba89e20] Distributed [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching [9fa8497b] Future [b77e0a4c] InteractiveUtils [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 [8f399da3] Libdl [37e2e46d] LinearAlgebra [56ddb016] Logging [d6f4376e] Markdown [a63ad114] Mmap [ca575930] NetworkOptions v1.2.0 [de0858da] Printf [9abbd945] Profile [3fa0cd96] REPL [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [6462fe0b] Sockets [2f01184e] SparseArrays v1.10.0 [10745b16] Statistics v1.10.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.4.0+0 [e37daf67] LibGit2_jll v1.6.4+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.1010+0 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.23+5 [05823500] OpenLibm_jll v0.8.5+0 [bea87d4a] SuiteSparse_jll v7.2.1+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.52.0+1 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... basic: Error During Test at /home/pkgeval/.julia/packages/JudiLing/DJNxY/test/pyndl_tests.jl:14 Got exception outside of a @test PyError (PyImport_ImportModule The Python package pyndl.ndl could not be imported by pyimport. Usually this means that you did not install pyndl.ndl in the Python version being used by PyCall. PyCall is currently configured to use the Julia-specific Python distribution installed by the Conda.jl package. To install the pyndl.ndl module, you can use `pyimport_conda("pyndl.ndl", PKG)`, where PKG is the Anaconda package that contains the module pyndl.ndl, or alternatively you can use the Conda package directly (via `using Conda` followed by `Conda.add` etcetera). Alternatively, if you want to use a different Python distribution on your system, such as a system-wide Python (as opposed to the Julia-specific Python), you can re-configure PyCall with that Python. As explained in the PyCall documentation, set ENV["PYTHON"] to the path/name of the python executable you want to use, run Pkg.build("PyCall"), and re-launch Julia. ) ModuleNotFoundError("No module named 'pyndl'") Stacktrace: [1] pyimport(name::String) @ PyCall ~/.julia/packages/PyCall/1gn3u/src/PyCall.jl:558 [2] pyndl(data_path::String; alpha::Float64, betas::Tuple{Float64, Float64}, method::String) @ JudiLing ~/.julia/packages/JudiLing/DJNxY/src/pyndl.jl:47 [3] macro expansion @ ~/.julia/packages/JudiLing/DJNxY/test/pyndl_tests.jl:16 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1582 [inlined] [5] top-level scope @ ~/.julia/packages/JudiLing/DJNxY/test/pyndl_tests.jl:16 [6] include(mod::Module, _path::String) @ Base ./Base.jl:495 [7] include(x::String) @ Main.var"##pyndl tests#225" ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [8] macro expansion @ ~/.julia/packages/JudiLing/DJNxY/test/runtests.jl:5 [inlined] [9] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1582 [inlined] [10] macro expansion @ ~/.julia/packages/JudiLing/DJNxY/test/runtests.jl:5 [inlined] [11] top-level scope @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 [12] eval(m::Module, e::Any) @ Core ./boot.jl:385 [13] macro expansion @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [inlined] [14] top-level scope @ ~/.julia/packages/JudiLing/DJNxY/test/runtests.jl:4 [15] include(fname::String) @ Base.MainInclude ./client.jl:487 [16] top-level scope @ none:6 Test Summary: | Error Total Time pyndl tests | 1 1 2m51.6s basic | 1 1 4.0s ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/JudiLing/DJNxY/test/runtests.jl:3 Testing failed after 180.57s ERROR: LoadError: Package JudiLing errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034 [3] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 755.36s: package tests unexpectedly errored