Package evaluation to test IndividualDisplacements on Julia 1.10.10 (c8be17dcfd*) started at 2026-02-03T05:18:00.838 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.10` Set-up completed after 5.13s ################################################################################ # Installation # Installing IndividualDisplacements... Resolving package versions... Updating `~/.julia/environments/v1.10/Project.toml` [b92f0c32] + IndividualDisplacements v0.5.4 Updating `~/.julia/environments/v1.10/Manifest.toml` [47edcb42] + ADTypes v1.21.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.43 [79e6a3ab] + Adapt v4.4.0 [4fba245c] + ArrayInterface v7.22.0 [d1d4a3ce] + BitFlags v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] + BracketingNonlinearSolve v1.6.2 [2a0fbf3d] + CPUSummary v0.2.7 [336ed68f] + CSV v0.10.15 [81a5f4ea] + CatViews v1.0.0 [d360d2e6] + ChainRulesCore v1.26.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 [944b1d66] + CodecZlib v0.7.8 [38540f10] + CommonSolve v0.2.6 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [f0e56b4a] + ConcurrentUtilities v2.5.0 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [6023044f] + CyclicArrays 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[9e88b42a] + Serialization [1a1011a3] + SharedArrays [6462fe0b] + Sockets [2f01184e] + SparseArrays v1.10.0 [10745b16] + Statistics v1.10.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test [cf7118a7] + UUIDs [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.4.0+0 [e37daf67] + LibGit2_jll v1.6.4+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.23+5 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.2.1+1 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.52.0+1 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 16.81s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/h9a3r/src/julia-1.9/activate_set.jl:63 Precompiling package dependencies... Precompiling packages... 33214.6 ms ✓ MeshArrays → MeshArraysGeoJSONExt 41350.6 ms ✓ MITgcm ✗ Makie ✗ IndividualDisplacements 118356.8 ms ✓ Climatology MITgcmNetCDFExt Waiting for background task / IO / timer. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 336] waiting for IO to finish: Handle type uv_handle_t->data tcp[11] 0x2a6d7db0->0x76aa444944c0 This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. 370607.3 ms ✓ MITgcm → MITgcmNetCDFExt ✗ GeoInterface → GeoInterfaceMakieExt ✗ MeshArrays → MeshArraysMakieExt ✗ ClimateModels → ClimateModelsMakieExt ✗ CairoMakie 17925.2 ms ✓ Climatology → ClimatologyMITgcmExt ✗ GeoJSON → GeoJSONMakieExt ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 36 running 0 of 1 signal (10): User defined signal 1 epoll_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/epoll.c:236 uv_run at /workspace/srcdir/libuv/src/unix/core.c:400 ijl_task_get_next at /source/src/partr.c:478 poptask at ./task.jl:999 wait at ./task.jl:1008 #wait#647 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] _trywait at ./asyncevent.jl:142 #728 at ./asyncevent.jl:304 jfptr_YY.728_76177.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2878 [inlined] ijl_apply_generic at /source/src/gf.c:3079 jl_apply at /source/src/julia.h:1982 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/epoll.c:236 uv_run at /workspace/srcdir/libuv/src/unix/core.c:400 ijl_task_get_next at /source/src/partr.c:478 poptask at ./task.jl:999 wait at ./task.jl:1008 task_done_hook at ./task.jl:682 jfptr_task_done_hook_75472.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2878 [inlined] ijl_apply_generic at /source/src/gf.c:3079 jl_apply at /source/src/julia.h:1982 [inlined] jl_finish_task at /source/src/task.c:323 start_task at /source/src/task.c:1264 unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.10/Profile/src/Profile.jl:1225 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x0000722126f14fb0 Total snapshots: 1. Utilization: 0% ╎1 @Base/task.jl:682; task_done_hook(t::Task) ╎ 1 @Base/task.jl:1008; wait() ╎ 1 @Base/task.jl:999; poptask(W::Base.IntrusiveLinkedListSynchronized{Task}) ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.10/Profile/src/Profile.jl:1225 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x000071d8fcce9dc0 Total snapshots: 107. Utilization: 0% ╎107 @Base/asyncevent.jl:304; (::Base.var"#728#729"{FileWatching.Pidfile.var… ╎ 107 @Base/asyncevent.jl:142; _trywait(t::Timer) ╎ 107 @Base/condition.jl:125; wait ╎ 107 @Base/condition.jl:130; wait(c::Base.GenericCondition{Base.Threads.S… ╎ 107 @Base/task.jl:1008; wait() 106╎ 107 @Base/task.jl:999; poptask(W::Base.IntrusiveLinkedListSynchronized… [1] signal (15): Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:156 epoll_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/epoll.c:236 uv_run at /workspace/srcdir/libuv/src/unix/core.c:400 ijl_task_get_next at /source/src/partr.c:478 [36] signal (15): Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:34 epoll_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/epoll.c:236 uv_run at /workspace/srcdir/libuv/src/unix/core.c:400 ijl_task_get_next at /source/src/partr.c:478 poptask at ./task.jl:999 poptask at ./task.jl:999 wait at ./task.jl:1008 wait at ./task.jl:1008 #wait#647 at ./condition.jl:130 #wait#647 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] _trywait at ./asyncevent.jl:142 wait at ./condition.jl:125 [inlined] wait_readnb at ./stream.jl:416 wait at ./asyncevent.jl:159 [inlined] profile_printing_listener at ./Base.jl:572 eof at ./stream.jl:106 eof at ./io.jl:451 [inlined] monitor_std#13 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/precompilation.jl:679 monitor_std at /source/usr/share/julia/stdlib/v1.10/Pkg/src/precompilation.jl:675 unknown function (ip: 0x71d936b42cb9) _jl_invoke at /source/src/gf.c:2878 [inlined] ijl_apply_generic at /source/src/gf.c:3079 #25 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/precompilation.jl:844 unknown function (ip: 0x71d936b3d302) _jl_invoke at /source/src/gf.c:2878 [inlined] ijl_apply_generic at /source/src/gf.c:3079 jl_apply at /source/src/julia.h:1982 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) Allocations: 42799381 (Pool: 42644600; Big: 154781); GC: 32 #1058 at ./Base.jl:608 ┌ Warning: Failed to clean up temporary path "/tmp/jl_AuNqK4" │ ErrorException("schedule: Task not runnable") └ @ Base.Filesystem file.jl:549 schedule: Task not runnablejfptr_YY.1058_85352.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2878 [inlined] ijl_apply_generic at /source/src/gf.c:3079 jl_apply at /source/src/julia.h:1982 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) Allocations: 5979226 (Pool: 5962162; Big: 17064); GC: 8 PkgEval terminated after 2743.12s: test duration exceeded the time limit