Package evaluation to test Dataverse on Julia 1.10.10 (c8be17dcfd*) started at 2026-02-02T20:48:06.050 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.10` Set-up completed after 5.24s ################################################################################ # Installation # Installing Dataverse... Resolving package versions... Updating `~/.julia/environments/v1.10/Project.toml` [9c0b9be8] + Dataverse v0.2.7 Updating `~/.julia/environments/v1.10/Manifest.toml` [d1d4a3ce] + BitFlags v0.1.9 [336ed68f] + CSV v0.10.15 [944b1d66] + CodecZlib v0.7.8 [34da2185] + Compat v4.18.1 [f0e56b4a] + ConcurrentUtilities v2.5.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [9c0b9be8] + Dataverse v0.2.7 [460bff9d] + ExceptionUnwrapping v0.1.11 [48062228] + FilePathsBase v0.9.24 [cd3eb016] + HTTP v1.10.19 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [e6f89c97] + LoggingExtras v1.2.0 [739be429] + MbedTLS v1.1.9 [e1d29d7a] + Missings v1.2.0 [4d8831e6] + OpenSSL v1.6.1 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.5.1 [08abe8d2] + PrettyTables v3.1.2 [189a3867] + Reexport v1.2.2 [91c51154] + SentinelArrays v1.4.9 [777ac1f9] + SimpleBufferStream v1.2.0 [a2af1166] + SortingAlgorithms v1.2.2 [892a3eda] + StringManipulation v0.4.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 [a5390f91] + ZipFile v0.10.1 [458c3c95] + OpenSSL_jll v3.5.5+0 [0dad84c5] + ArgTools v1.1.1 [56f22d72] + Artifacts [2a0f44e3] + Base64 [ade2ca70] + Dates [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching [9fa8497b] + Future [b77e0a4c] + InteractiveUtils [b27032c2] + LibCURL v0.6.4 [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [56ddb016] + Logging [d6f4376e] + Markdown [a63ad114] + Mmap [ca575930] + NetworkOptions v1.2.0 [de0858da] + Printf [3fa0cd96] + REPL [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [6462fe0b] + Sockets [2f01184e] + SparseArrays v1.10.0 [10745b16] + Statistics v1.10.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test [cf7118a7] + UUIDs [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.4.0+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.23+5 [bea87d4a] + SuiteSparse_jll v7.2.1+1 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.52.0+1 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 10.0s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 11159.8 ms ? Dataverse → DataverseCondaPkgExt 58584.3 ms ? Dataverse → DataversePythonCallExt Precompilation completed after 79.2s ################################################################################ # Testing # Testing Dataverse Status `/tmp/jl_kYuXys/Project.toml` [9c0b9be8] Dataverse v0.2.7 [6099a3de] PythonCall v0.9.31 [8dfed614] Test [cf7118a7] UUIDs Status `/tmp/jl_kYuXys/Manifest.toml` [d1d4a3ce] BitFlags v0.1.9 [336ed68f] CSV v0.10.15 [944b1d66] CodecZlib v0.7.8 [34da2185] Compat v4.18.1 [f0e56b4a] ConcurrentUtilities v2.5.0 [992eb4ea] CondaPkg v0.2.33 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [9c0b9be8] Dataverse v0.2.7 [460bff9d] ExceptionUnwrapping v0.1.11 [48062228] FilePathsBase v0.9.24 [cd3eb016] HTTP v1.10.19 [842dd82b] InlineStrings v1.4.5 [41ab1584] InvertedIndices v1.3.1 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [0f8b85d8] JSON3 v1.14.3 [b964fa9f] LaTeXStrings v1.4.0 [e6f89c97] LoggingExtras v1.2.0 [1914dd2f] MacroTools v0.5.16 [739be429] MbedTLS v1.1.9 [0b3b1443] MicroMamba v0.1.14 [e1d29d7a] Missings v1.2.0 [4d8831e6] OpenSSL v1.6.1 [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [fa939f87] Pidfile v1.3.0 [2dfb63ee] PooledArrays v1.4.3 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.5.1 [08abe8d2] PrettyTables v3.1.2 [6099a3de] PythonCall v0.9.31 [189a3867] Reexport v1.2.2 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.9 [777ac1f9] SimpleBufferStream v1.2.0 [a2af1166] SortingAlgorithms v1.2.2 [892a3eda] StringManipulation v0.4.2 [856f2bd8] StructTypes v1.11.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.6.1 [e17b2a0c] UnsafePointers v1.0.0 [ea10d353] WeakRefStrings v1.4.2 [76eceee3] WorkerUtilities v1.6.1 [a5390f91] ZipFile v0.10.1 [458c3c95] OpenSSL_jll v3.5.5+0 ⌅ [f8abcde7] micromamba_jll v1.5.12+0 [4d7b5844] pixi_jll v0.41.3+0 [0dad84c5] ArgTools v1.1.1 [56f22d72] Artifacts [2a0f44e3] Base64 [ade2ca70] Dates [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching [9fa8497b] Future [b77e0a4c] InteractiveUtils [4af54fe1] LazyArtifacts [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 [8f399da3] Libdl [37e2e46d] LinearAlgebra [56ddb016] Logging [d6f4376e] Markdown [a63ad114] Mmap [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.10.0 [de0858da] Printf [3fa0cd96] REPL [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [6462fe0b] Sockets [2f01184e] SparseArrays v1.10.0 [10745b16] Statistics v1.10.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.4.0+0 [e37daf67] LibGit2_jll v1.6.4+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.1010+0 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.23+5 [bea87d4a] SuiteSparse_jll v7.2.1+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.52.0+1 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... WARNING: Method definition pyDataverse_install() in module Dataverse at /home/pkgeval/.julia/packages/Dataverse/jLQ3W/src/Dataverse.jl:6 overwritten in module DataverseCondaPkgExt at /home/pkgeval/.julia/packages/Dataverse/jLQ3W/ext/DataverseCondaPkgExt.jl:5. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. WARNING: Method definition pyDataverse_install() in module Dataverse at /home/pkgeval/.julia/packages/Dataverse/jLQ3W/src/Dataverse.jl:6 overwritten in module DataverseCondaPkgExt at /home/pkgeval/.julia/packages/Dataverse/jLQ3W/ext/DataverseCondaPkgExt.jl:5. CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/83z4q/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/CondaPkg/0UqYV/CondaPkg.toml CondaPkg Resolving changes + libstdcxx + libstdcxx-ng + openssl + python CondaPkg Initialising pixi │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi │ init │ --format pixi └ /tmp/jl_kYuXys/.CondaPkg ✔ Created /tmp/jl_kYuXys/.CondaPkg/pixi.toml CondaPkg Wrote /tmp/jl_kYuXys/.CondaPkg/pixi.toml │ [dependencies] │ openssl = ">=3, <3.6" │ libstdcxx = ">=3.4,<14.0" │ libstdcxx-ng = ">=3.4,<14.0" │ │ [dependencies.python] │ channel = "conda-forge" │ build = "*cp*" │ version = ">=3.10,!=3.14.0,!=3.14.1,<4" │ │ [project] │ name = ".CondaPkg" │ platforms = ["linux-64"] │ channels = ["conda-forge"] │ channel-priority = "strict" └ description = "automatically generated by CondaPkg.jl" CondaPkg Installing packages │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi │ install └ --manifest-path /tmp/jl_kYuXys/.CondaPkg/pixi.toml ✔ The default environment has been installed. ┌ Warning: Module DataverseCondaPkgExt with build ID ffffffff-ffff-ffff-d534-ccd36e4ce47e is missing from the cache. │ This may mean DataverseCondaPkgExt [33312a93-eff2-581d-847a-45e184e44bf0] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2021 ┌ Error: Error during loading of extension DataverseCondaPkgExt of Dataverse, use `Base.retry_load_extensions()` to retry. │ exception = │ 1-element ExceptionStack: │ Declaring __precompile__(false) is not allowed in files that are being precompiled. │ Stacktrace: │ [1] _require(pkg::Base.PkgId, env::Nothing) │ @ Base ./loading.jl:2025 │ [2] __require_prelocked(uuidkey::Base.PkgId, env::Nothing) │ @ Base ./loading.jl:1885 │ [3] #invoke_in_world#3 │ @ ./essentials.jl:926 [inlined] │ [4] invoke_in_world │ @ ./essentials.jl:923 [inlined] │ [5] _require_prelocked │ @ ./loading.jl:1876 [inlined] │ [6] _require_prelocked │ @ ./loading.jl:1875 [inlined] │ [7] run_extension_callbacks(extid::Base.ExtensionId) │ @ Base ./loading.jl:1368 │ [8] run_extension_callbacks(pkgid::Base.PkgId) │ @ Base ./loading.jl:1403 │ [9] run_package_callbacks(modkey::Base.PkgId) │ @ Base ./loading.jl:1227 │ [10] _tryrequire_from_serialized(modkey::Base.PkgId, path::String, ocachepath::Nothing, sourcepath::String, depmods::Vector{Any}) │ @ Base ./loading.jl:1560 │ [11] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128) │ @ Base ./loading.jl:1647 │ [12] _require(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2011 │ [13] __require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:1885 │ [14] #invoke_in_world#3 │ @ ./essentials.jl:926 [inlined] │ [15] invoke_in_world │ @ ./essentials.jl:923 [inlined] │ [16] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:1876 │ [17] macro expansion │ @ ./loading.jl:1863 [inlined] │ [18] macro expansion │ @ ./lock.jl:270 [inlined] │ [19] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:1826 │ [20] #invoke_in_world#3 │ @ ./essentials.jl:926 [inlined] │ [21] invoke_in_world │ @ ./essentials.jl:923 [inlined] │ [22] require(into::Module, mod::Symbol) │ @ Base ./loading.jl:1819 │ [23] include │ @ ./Base.jl:495 [inlined] │ [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) │ @ Base ./loading.jl:2295 │ [25] top-level scope │ @ stdin:4 │ [26] eval │ @ ./boot.jl:385 [inlined] │ [27] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ @ Base ./loading.jl:2149 │ [28] include_string │ @ ./loading.jl:2159 [inlined] │ [29] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:314 │ [30] _start() │ @ Base ./client.jl:550 └ @ Base loading.jl:1374 WARNING: Method definition pyDataverse_APIs() in module Dataverse at /home/pkgeval/.julia/packages/Dataverse/jLQ3W/src/Dataverse.jl:7 overwritten in module DataversePythonCallExt at /home/pkgeval/.julia/packages/Dataverse/jLQ3W/ext/DataversePythonCallExt.jl:16. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. WARNING: Method definition pyDataverse_APIs() in module Dataverse at /home/pkgeval/.julia/packages/Dataverse/jLQ3W/src/Dataverse.jl:7 overwritten in module DataversePythonCallExt at /home/pkgeval/.julia/packages/Dataverse/jLQ3W/ext/DataversePythonCallExt.jl:16. CondaPkg Found dependencies: /tmp/jl_kYuXys/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/83z4q/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/CondaPkg/0UqYV/CondaPkg.toml CondaPkg Resolving changes + pydataverse CondaPkg Initialising pixi │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi │ init │ --format pixi └ /tmp/jl_kYuXys/.CondaPkg ✔ Created /tmp/jl_kYuXys/.CondaPkg/pixi.toml CondaPkg Wrote /tmp/jl_kYuXys/.CondaPkg/pixi.toml │ [dependencies] │ openssl = ">=3, <3.6" │ libstdcxx = ">=3.4,<14.0" │ libstdcxx-ng = ">=3.4,<14.0" │ pydataverse = "*" │ │ [dependencies.python] │ channel = "conda-forge" │ build = "*cp*" │ version = ">=3.10,!=3.14.0,!=3.14.1,<4" │ │ [project] │ name = ".CondaPkg" │ platforms = ["linux-64"] │ channels = ["conda-forge"] │ channel-priority = "strict" └ description = "automatically generated by CondaPkg.jl" CondaPkg Installing packages │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi │ install └ --manifest-path /tmp/jl_kYuXys/.CondaPkg/pixi.toml ✔ The default environment has been installed. Dataverse.jl: Error During Test at /home/pkgeval/.julia/packages/Dataverse/jLQ3W/test/runtests.jl:15 Got exception outside of a @test BoundsError: attempt to access 1-element Vector{SubString{String}} at index [2] Stacktrace: [1] getindex @ ./essentials.jl:13 [inlined] [2] html_to_json_ld(file_html1::String) @ Dataverse.json_ld ~/.julia/packages/Dataverse/jLQ3W/src/json_ld.jl:52 [3] #get#1 @ ~/.julia/packages/Dataverse/jLQ3W/src/json_ld.jl:20 [inlined] [4] get(doi::String) @ Dataverse.json_ld ~/.julia/packages/Dataverse/jLQ3W/src/json_ld.jl:18 [5] macro expansion @ ~/.julia/packages/Dataverse/jLQ3W/test/runtests.jl:19 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1582 [inlined] [7] top-level scope @ ~/.julia/packages/Dataverse/jLQ3W/test/runtests.jl:16 [8] include(fname::String) @ Base.MainInclude ./client.jl:487 [9] top-level scope @ none:6 Test Summary: | Pass Error Total Time Dataverse.jl | 1 1 2 23.5s ERROR: LoadError: Some tests did not pass: 1 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/Dataverse/jLQ3W/test/runtests.jl:15 Testing failed after 92.7s ERROR: LoadError: Package Dataverse errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034 [3] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:223 in expression starting at /PkgEval.jl/scripts/evaluate.jl:214 PkgEval failed after 213.76s: illegal method overwrites during precompilation