Package evaluation to test CliqueTrees on Julia 1.10.10 (c8be17dcfd*) started at 2026-02-02T15:52:09.539


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.10`

Set-up completed after 5.36s


################################################################################
# Installation
#

Installing CliqueTrees...
   Resolving package versions...
    Updating `~/.julia/environments/v1.10/Project.toml`
  [60701a23] + CliqueTrees v1.12.3
    Updating `~/.julia/environments/v1.10/Manifest.toml`
  [1520ce14] + AbstractTrees v0.4.5
  [ec485272] + ArnoldiMethod v0.4.0
  [60701a23] + CliqueTrees v1.12.3
  [08986516] + Collects v1.0.0
  [864edb3b] + DataStructures v0.19.3
  [1a297f60] + FillArrays v1.16.0
  [3821ddf9] + FixedSizeArrays v1.2.0
  [86223c79] + Graphs v1.13.4
  [d25df0c9] + Inflate v0.1.5
  [1914dd2f] + MacroTools v0.5.16
  [bac558e1] + OrderedCollections v1.8.1
⌅ [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.5.1
  [699a6c99] + SimpleTraits v0.9.5
  [90137ffa] + StaticArrays v1.9.16
  [1e83bf80] + StaticArraysCore v1.4.4
  [56f22d72] + Artifacts
  [2a0f44e3] + Base64
  [ade2ca70] + Dates
  [b77e0a4c] + InteractiveUtils
  [8f399da3] + Libdl
  [37e2e46d] + LinearAlgebra
  [d6f4376e] + Markdown
  [de0858da] + Printf
  [9a3f8284] + Random
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization
  [2f01184e] + SparseArrays v1.10.0
  [10745b16] + Statistics v1.10.0
  [fa267f1f] + TOML v1.0.3
  [4ec0a83e] + Unicode
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [4536629a] + OpenBLAS_jll v0.3.23+5
  [bea87d4a] + SuiteSparse_jll v7.2.1+1
  [8e850b90] + libblastrampoline_jll v5.11.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 9.01s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

┌ Warning: Could not use exact versions of packages in manifest, re-resolving
└ @ TestEnv ~/.julia/packages/TestEnv/h9a3r/src/julia-1.9/activate_set.jl:63
┌ Warning: tarball content does not match git-tree-sha1
└ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:660
Precompiling package dependencies...
Precompiling packages...
   1738.2 ms  ✓ AlgebraicInterfaces
    856.8 ms  ✓ FlowCutterPACE17_jll
    847.2 ms  ✓ libpicosat_jll
   4301.6 ms  ✓ Metis → MetisGraphs
  11489.4 ms  ✓ CliqueTrees
   4676.3 ms  ✓ TreeWidthSolver
  39964.7 ms  ✓ SuiteSparseMatrixCollection
  80484.4 ms  ✓ Latexify → DataFramesExt
    992.5 ms  ✓ CryptoMiniSat_jll
  85086.4 ms  ✓ Plots
  54016.9 ms  ✓ ACSets
  43928.9 ms  ✓ GATlab
   6584.3 ms  ✓ CliqueTrees → MetisExt
   2446.6 ms  ✓ CliqueTrees → AMDExt
   2454.9 ms  ✓ CliqueTrees → TreeWidthSolverExt
 103046.8 ms  ✓ Laplacians
  58238.1 ms  ✓ ACSets → DataFramesACSetsExt
  72850.4 ms  ✓ Catlab
 151109.1 ms  ✓ CliqueTrees → LaplaciansExt
  10352.6 ms  ✓ Catlab → CatlabDataFramesExt
  15870.4 ms  ✓ Catlab → CatlabGraphsExt
  12326.7 ms  ✓ CliqueTrees → CatlabExt
  22 dependencies successfully precompiled in 767 seconds. 228 already precompiled.

Precompilation completed after 792.19s


################################################################################
# Testing
#

     Testing CliqueTrees
┌ Warning: Could not use exact versions of packages in manifest, re-resolving
└ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1829
      Status `/tmp/jl_AQalol/Project.toml`
  [14f7f29c] AMD v0.5.3
  [1520ce14] AbstractTrees v0.4.5
  [4c88cf16] Aqua v0.8.14
⌃ [134e5e36] Catlab v0.16.20
⌃ [60701a23] CliqueTrees v1.2.0
⌃ [86223c79] Graphs v1.13.1
⌅ [c3a54625] JET v0.9.18
⌅ [aa1ae85d] JuliaInterpreter v0.9.46
  [2a6221f6] KaHyPar v0.3.1
  [6f8e5838] Laplacians v1.4.1
  [4d4711f2] MatrixMarket v0.5.2
  [2679e427] Metis v1.5.0
  [ac199af8] SuiteSparseMatrixCollection v0.5.7
  [7d267fc5] TreeWidthSolver v0.3.5
  [cf02a7a8] CryptoMiniSat_jll v6.0.0+0
  [008204e2] FlowCutterPACE17_jll v0.0.2+0
  [54ea7443] Lingeling_jll v1.0.0+1
  [e78fa76d] PicoSAT_jll v965.0.0+0
  [6b231c3b] libpicosat_jll v965.0.1+0
  [37e2e46d] LinearAlgebra
  [2f01184e] SparseArrays v1.10.0
  [8dfed614] Test
      Status `/tmp/jl_AQalol/Manifest.toml`
  [227ef7b5] ACSets v0.2.26
  [14f7f29c] AMD v0.5.3
  [1520ce14] AbstractTrees v0.4.5
  [23cfdc9f] AlgebraicInterfaces v0.1.4
  [66dad0bd] AliasTables v1.1.3
  [4c88cf16] Aqua v0.8.14
  [dce04be8] ArgCheck v2.5.0
  [ec485272] ArnoldiMethod v0.4.0
  [7d9fca2a] Arpack v0.5.4
  [50ba71b6] BitBasis v0.9.10
  [d1d4a3ce] BitFlags v0.1.9
  [fa961155] CEnum v0.5.0
  [336ed68f] CSV v0.10.15
⌃ [134e5e36] Catlab v0.16.20
⌃ [60701a23] CliqueTrees v1.2.0
⌅ [da1fd8a2] CodeTracking v1.3.9
  [944b1d66] CodecZlib v0.7.8
  [35d6a980] ColorSchemes v3.31.0
  [3da002f7] ColorTypes v0.12.1
  [c3611d14] ColorVectorSpace v0.11.0
  [5ae59095] Colors v0.13.1
  [861a8166] Combinatorics v1.1.0
  [0fb5dd42] CompTime v0.1.2
  [34da2185] Compat v4.18.1
  [a81c6b42] Compose v0.9.6
  [f0e56b4a] ConcurrentUtilities v2.5.0
  [d38c429a] Contour v0.6.3
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
  [a93c6f00] DataFrames v1.8.1
⌅ [864edb3b] DataStructures v0.18.22
  [e2d170a0] DataValueInterfaces v1.0.0
  [8bb1440f] DelimitedFiles v1.9.1
  [ffbed154] DocStringExtensions v0.9.5
  [460bff9d] ExceptionUnwrapping v0.1.11
  [c87230d0] FFMPEG v0.4.5
  [5789e2e9] FileIO v1.18.0
  [48062228] FilePathsBase v0.9.24
  [53c48c17] FixedPointNumbers v0.8.5
  [1fa38f19] Format v1.3.7
⌅ [f0ffcf3b] GATlab v0.1.6
  [28b8d3ca] GR v0.73.22
  [6b9d7cbe] GeneralizedGenerated v0.3.3
⌃ [86223c79] Graphs v1.13.1
  [42e2da0e] Grisu v1.0.2
  [cd3eb016] HTTP v1.10.19
  [076d061b] HashArrayMappedTries v0.2.0
  [d25df0c9] Inflate v0.1.5
  [842dd82b] InlineStrings v1.4.5
  [41ab1584] InvertedIndices v1.3.1
  [92d709cd] IrrationalConstants v0.2.6
  [c8e1da08] IterTools v1.10.0
  [82899510] IteratorInterfaceExtensions v1.0.0
⌅ [c3a54625] JET v0.9.18
⌅ [033835bb] JLD2 v0.5.15
  [1019f520] JLFzf v0.1.11
  [692b3bcd] JLLWrappers v1.7.1
⌅ [682c06a0] JSON v0.21.4
  [0f8b85d8] JSON3 v1.14.3
⌅ [aa1ae85d] JuliaInterpreter v0.9.46
⌅ [70703baa] JuliaSyntax v0.4.10
  [b14d175d] JuliaVariables v0.2.4
  [2a6221f6] KaHyPar v0.3.1
  [b964fa9f] LaTeXStrings v1.4.0
  [6f8e5838] Laplacians v1.4.1
  [23fbe1c1] Latexify v0.16.10
  [9c8b4983] LightXML v0.9.3
  [2ab3a3ac] LogExpFunctions v0.3.29
  [e6f89c97] LoggingExtras v1.2.0
⌃ [6f1432cf] LoweredCodeUtils v3.2.2
  [d8e11817] MLStyle v0.4.17
  [3da0fdf6] MPIPreferences v0.1.11
  [1914dd2f] MacroTools v0.5.16
  [4d4711f2] MatrixMarket v0.5.2
  [739be429] MbedTLS v1.1.9
  [442fdcdd] Measures v0.3.3
  [2679e427] Metis v1.5.0
  [e1d29d7a] Missings v1.2.0
  [77ba4419] NaNMath v1.1.3
  [71a1bf82] NameResolution v0.1.5
  [4d8831e6] OpenSSL v1.6.1
  [bac558e1] OrderedCollections v1.8.1
  [12d937ae] PEG v1.0.4
  [69de0a69] Parsers v2.8.3
  [2ae35dd2] Permutations v0.4.23
  [ccf2f8ad] PlotThemes v3.3.0
  [995b91a9] PlotUtils v1.4.4
  [91a5bcdd] Plots v1.41.4
⌅ [f27b6e38] Polynomials v3.2.13
  [2dfb63ee] PooledArrays v1.4.3
⌅ [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.5.1
  [8162dcfd] PrettyPrint v0.2.0
⌅ [08abe8d2] PrettyTables v2.4.0
  [43287f4e] PtrArrays v1.3.0
  [3639840a] RandomV06 v0.0.2
  [3cdcf5f2] RecipesBase v1.3.4
  [01d81517] RecipesPipeline v0.6.12
  [189a3867] Reexport v1.2.2
  [05181044] RelocatableFolders v1.0.1
  [ae029012] Requires v1.3.1
  [7e506255] ScopedValues v1.5.0
  [6c6a2e73] Scratch v1.3.0
  [91c51154] SentinelArrays v1.4.9
  [992d4aef] Showoff v1.0.3
  [777ac1f9] SimpleBufferStream v1.2.0
  [699a6c99] SimpleTraits v0.9.5
  [a2af1166] SortingAlgorithms v1.2.2
  [860ef19b] StableRNGs v1.0.4
  [90137ffa] StaticArrays v1.9.16
  [1e83bf80] StaticArraysCore v1.4.4
  [82ae8749] StatsAPI v1.8.0
  [2913bbd2] StatsBase v0.34.10
  [892a3eda] StringManipulation v0.4.2
  [6ec83bb0] StructEquality v2.1.0
  [856f2bd8] StructTypes v1.11.0
  [ac199af8] SuiteSparseMatrixCollection v0.5.7
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.1
  [62fd8b95] TensorCore v0.1.1
  [3bb67fe8] TranscodingStreams v0.11.3
  [7d267fc5] TreeWidthSolver v0.3.5
  [5c2747f8] URIs v1.6.1
  [1cfade01] UnicodeFun v0.4.1
  [41fe7b60] Unzip v0.2.0
  [ea10d353] WeakRefStrings v1.4.2
  [76eceee3] WorkerUtilities v1.6.1
⌅ [68821587] Arpack_jll v3.5.2+0
  [6e34b625] Bzip2_jll v1.0.9+0
  [83423d85] Cairo_jll v1.18.5+0
  [cf02a7a8] CryptoMiniSat_jll v6.0.0+0
  [ee1fde0b] Dbus_jll v1.16.2+0
  [2702e6a9] EpollShim_jll v0.0.20230411+1
  [2e619515] Expat_jll v2.7.3+0
  [b22a6f82] FFMPEG_jll v8.0.1+0
  [008204e2] FlowCutterPACE17_jll v0.0.2+0
  [a3f928ae] Fontconfig_jll v2.17.1+0
  [d7e528f0] FreeType2_jll v2.13.4+0
  [559328eb] FriBidi_jll v1.0.17+0
  [0656b61e] GLFW_jll v3.4.1+0
  [d2c73de3] GR_jll v0.73.22+0
  [b0724c58] GettextRuntime_jll v0.22.4+0
  [61579ee1] Ghostscript_jll v9.55.1+0
  [7746bdde] Glib_jll v2.86.2+0
  [3b182d85] Graphite2_jll v1.3.15+0
  [2e76f6c2] HarfBuzz_jll v8.5.1+0
  [e33a78d0] Hwloc_jll v2.12.2+0
  [aacddb02] JpegTurbo_jll v3.1.4+0
⌅ [87a0c12d] KaHyPar_jll v1.3.3+0
  [c1c5ebd0] LAME_jll v3.100.3+0
  [88015f11] LERC_jll v4.0.1+0
  [1d63c593] LLVMOpenMP_jll v18.1.8+0
  [dd4b983a] LZO_jll v2.10.3+0
⌅ [e9f186c6] Libffi_jll v3.4.7+0
  [7e76a0d4] Libglvnd_jll v1.7.1+1
  [94ce4f54] Libiconv_jll v1.18.0+0
  [4b2f31a3] Libmount_jll v2.41.2+0
  [89763e89] Libtiff_jll v4.7.2+0
  [38a345b3] Libuuid_jll v2.41.2+0
  [54ea7443] Lingeling_jll v1.0.0+1
  [d00139f3] METIS_jll v5.1.3+0
  [7cb0a576] MPICH_jll v4.3.2+0
  [f1f71cc9] MPItrampoline_jll v5.5.4+0
  [9237b28f] MicrosoftMPI_jll v10.1.4+3
  [e7412a2a] Ogg_jll v1.3.6+0
  [fe0851c0] OpenMPI_jll v5.0.9+0
  [458c3c95] OpenSSL_jll v3.5.5+0
  [91d4177d] Opus_jll v1.6.1+0
  [36c8627f] Pango_jll v1.57.0+0
  [e78fa76d] PicoSAT_jll v965.0.0+0
⌅ [30392449] Pixman_jll v0.44.2+0
  [c0090381] Qt6Base_jll v6.8.2+2
  [629bc702] Qt6Declarative_jll v6.8.2+1
  [ce943373] Qt6ShaderTools_jll v6.8.2+1
  [e99dba38] Qt6Wayland_jll v6.8.2+2
  [a44049a8] Vulkan_Loader_jll v1.3.243+0
  [a2964d1f] Wayland_jll v1.24.0+0
⌅ [02c8fc9c] XML2_jll v2.13.9+0
  [ffd25f8a] XZ_jll v5.8.2+0
  [f67eecfb] Xorg_libICE_jll v1.1.2+0
  [c834827a] Xorg_libSM_jll v1.2.6+0
  [4f6342f7] Xorg_libX11_jll v1.8.12+0
  [0c0b7dd1] Xorg_libXau_jll v1.0.13+0
  [935fb764] Xorg_libXcursor_jll v1.2.4+0
  [a3789734] Xorg_libXdmcp_jll v1.1.6+0
  [1082639a] Xorg_libXext_jll v1.3.7+0
  [d091e8ba] Xorg_libXfixes_jll v6.0.2+0
  [a51aa0fd] Xorg_libXi_jll v1.8.3+0
  [d1454406] Xorg_libXinerama_jll v1.1.6+0
  [ec84b674] Xorg_libXrandr_jll v1.5.5+0
  [ea2f1a96] Xorg_libXrender_jll v0.9.12+0
  [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0
  [c7cfdc94] Xorg_libxcb_jll v1.17.1+0
  [cc61e674] Xorg_libxkbfile_jll v1.1.3+0
  [e920d4aa] Xorg_xcb_util_cursor_jll v0.1.6+0
  [12413925] Xorg_xcb_util_image_jll v0.4.1+0
  [2def613f] Xorg_xcb_util_jll v0.4.1+0
  [975044d2] Xorg_xcb_util_keysyms_jll v0.4.1+0
  [0d47668e] Xorg_xcb_util_renderutil_jll v0.3.10+0
  [c22f9ab0] Xorg_xcb_util_wm_jll v0.4.2+0
  [35661453] Xorg_xkbcomp_jll v1.4.7+0
  [33bec58e] Xorg_xkeyboard_config_jll v2.44.0+0
  [c5fb5394] Xorg_xtrans_jll v1.6.0+0
  [3161d3a3] Zstd_jll v1.5.7+1
⌅ [28df3c45] boost_jll v1.76.0+1
  [35ca27e7] eudev_jll v3.2.14+0
  [214eeab7] fzf_jll v0.61.1+0
  [a4ae2306] libaom_jll v3.13.1+0
  [0ac62f75] libass_jll v0.17.4+0
  [1183f4f0] libdecor_jll v0.2.2+0
  [2db6ffa8] libevdev_jll v1.13.4+0
  [f638f0a6] libfdk_aac_jll v2.0.4+0
  [36db933b] libinput_jll v1.28.1+0
  [6b231c3b] libpicosat_jll v965.0.1+0
  [b53b4c65] libpng_jll v1.6.54+0
  [f27f6e37] libvorbis_jll v1.3.8+0
  [009596ad] mtdev_jll v1.1.7+0
⌅ [1270edf5] x264_jll v10164.0.1+0
  [dfaa095f] x265_jll v4.1.0+0
  [d8fb68d0] xkbcommon_jll v1.13.0+0
  [0dad84c5] ArgTools v1.1.1
  [56f22d72] Artifacts
  [2a0f44e3] Base64
  [ade2ca70] Dates
  [8ba89e20] Distributed
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching
  [9fa8497b] Future
  [b77e0a4c] InteractiveUtils
  [4af54fe1] LazyArtifacts
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2
  [8f399da3] Libdl
  [37e2e46d] LinearAlgebra
  [56ddb016] Logging
  [d6f4376e] Markdown
  [a63ad114] Mmap
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.10.0
  [de0858da] Printf
  [3fa0cd96] REPL
  [9a3f8284] Random
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization
  [1a1011a3] SharedArrays
  [6462fe0b] Sockets
  [2f01184e] SparseArrays v1.10.0
  [10745b16] Statistics v1.10.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test
  [cf7118a7] UUIDs
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  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.1010+0
  [14a3606d] MozillaCACerts_jll v2025.12.2
  [4536629a] OpenBLAS_jll v0.3.23+5
  [05823500] OpenLibm_jll v0.8.5+0
  [efcefdf7] PCRE2_jll v10.42.0+1
  [bea87d4a] SuiteSparse_jll v7.2.1+1
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.52.0+1
  [3f19e933] p7zip_jll v17.4.0+2
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...
Test Summary:          | Pass  Total   Time
Code Quality (Aqua.jl) |   11     11  37.8s
Test Summary:         |Time
Code Quality (JET.jl) | None  1.2s
Core: Error During Test at /home/pkgeval/.julia/packages/CliqueTrees/Tzv8B/test/runtests.jl:11
  Got exception outside of a @test
  LoadError: UndefVarError: `Parent` not defined
  Stacktrace:
   [1] include(fname::String)
     @ Base.MainInclude ./client.jl:487
   [2] macro expansion
     @ ~/.julia/packages/CliqueTrees/Tzv8B/test/runtests.jl:12 [inlined]
   [3] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1582 [inlined]
   [4] top-level scope
     @ ~/.julia/packages/CliqueTrees/Tzv8B/test/runtests.jl:12
   [5] include(fname::String)
     @ Base.MainInclude ./client.jl:487
   [6] top-level scope
     @ none:6
  in expression starting at /home/pkgeval/.julia/packages/CliqueTrees/Tzv8B/test/core.jl:5
Test Summary: | Error  Total  Time
Core          |     1      1  2.0s
ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/CliqueTrees/Tzv8B/test/runtests.jl:11

Testing failed after 62.39s

ERROR: LoadError: Package CliqueTrees errored during testing
Stacktrace:
 [1] pkgerror(msg::String)
   @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70
 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
   @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034
 [3] test
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined]
 [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444
 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159
 [6] test
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined]
 [7] #test#74
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined]
 [8] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:223
in expression starting at /PkgEval.jl/scripts/evaluate.jl:214

PkgEval failed after 879.33s: package tests unexpectedly errored