Package evaluation of RegressionDynamicCausalModeling on Julia 1.12.0-DEV.2044 (c78016e4dc*) started at 2025-02-25T23:11:50.468 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.82s ################################################################################ # Installation # Installing RegressionDynamicCausalModeling... Resolving package versions... Installed oneTBB_jll ────────────────────── v2022.0.0+0 Installed libaec_jll ────────────────────── v1.1.3+0 Installed Rmath ─────────────────────────── v0.8.0 Installed IrrationalConstants ───────────── v0.2.4 Installed MPICH_jll ─────────────────────── v4.3.0+0 Installed Scratch ───────────────────────── v1.2.1 Installed HypergeometricFunctions ───────── v0.3.27 Installed Preferences ───────────────────── v1.4.3 Installed Hwloc_jll ─────────────────────── v2.12.0+0 Installed PtrArrays ─────────────────────── v1.3.0 Installed StatsFuns ─────────────────────── v1.3.2 Installed MicrosoftMPI_jll ──────────────── v10.1.4+3 Installed DataAPI ───────────────────────── v1.16.0 Installed FFTW ──────────────────────────── v1.8.1 Installed PDMats ────────────────────────── v0.11.32 Installed SpecialFunctions ──────────────── v2.5.0 Installed OpenMPI_jll ───────────────────── v5.0.7+0 Installed MKL_jll ───────────────────────── v2025.0.1+1 Installed AbstractFFTs ──────────────────── v1.5.0 Installed ProgressMeter ─────────────────── v1.10.2 Installed JLLWrappers ───────────────────── v1.7.0 Installed OrderedCollections ────────────── v1.8.0 Installed PrecompileTools ───────────────── v1.2.1 Installed RegressionDynamicCausalModeling ─ v0.1.4 Installed MPIPreferences ────────────────── v0.1.11 Installed Reexport ──────────────────────── v1.2.2 Installed TranscodingStreams ────────────── v0.11.3 Installed MPItrampoline_jll ─────────────── v5.5.2+0 Installed FillArrays ────────────────────── v1.13.0 Installed QuadGK ────────────────────────── v2.11.2 Installed Rmath_jll ─────────────────────── v0.5.1+0 Installed Statistics ────────────────────── v1.11.1 Installed DataStructures ────────────────── v0.18.20 Installed Requires ──────────────────────── v1.3.0 Installed LogExpFunctions ───────────────── v0.3.29 Installed IntelOpenMP_jll ───────────────── v2025.0.4+0 Installed MAT ───────────────────────────── v0.10.7 Installed HDF5 ──────────────────────────── v0.17.2 Installed FFTW_jll ──────────────────────── v3.3.10+3 Installed BufferedStreams ───────────────── v1.2.2 Installed StatsAPI ──────────────────────── v1.7.0 Installed AliasTables ───────────────────── v1.1.3 Installed OpenSpecFun_jll ───────────────── v0.5.6+0 Installed Compat ────────────────────────── v4.16.0 Installed CodecZlib ─────────────────────── v0.7.8 Installed Missings ──────────────────────── v1.2.0 Installed SortingAlgorithms ─────────────── v1.2.1 Installed StatsBase ─────────────────────── v0.34.4 Installed DocStringExtensions ───────────── v0.9.3 Installed HDF5_jll ──────────────────────── v1.14.5+0 Installed Distributions ─────────────────── v0.25.117 Installing 9 artifacts Installed artifact Rmath 121.9 KiB Installed artifact libaec 96.2 KiB Installed artifact oneTBB 435.6 KiB Installed artifact FFTW 2.2 MiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact HDF5 5.7 MiB Installed artifact MPICH 7.4 MiB Installed artifact Hwloc 3.5 MiB Installed artifact rDCMdata 2.2 MiB Updating `~/.julia/environments/v1.12/Project.toml` [4fb452e6] + RegressionDynamicCausalModeling v0.1.4 Updating `~/.julia/environments/v1.12/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [66dad0bd] + AliasTables v1.1.3 [e1450e63] + BufferedStreams v1.2.2 [944b1d66] + CodecZlib v0.7.8 [34da2185] + Compat v4.16.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.20 [31c24e10] + Distributions v0.25.117 [ffbed154] + DocStringExtensions v0.9.3 [7a1cc6ca] + FFTW v1.8.1 [1a297f60] + FillArrays v1.13.0 [f67ccb44] + HDF5 v0.17.2 [34004b35] + HypergeometricFunctions v0.3.27 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [23992714] + MAT v0.10.7 [3da0fdf6] + MPIPreferences v0.1.11 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.32 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [92933f4c] + ProgressMeter v1.10.2 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [4fb452e6] + RegressionDynamicCausalModeling v0.1.4 [ae029012] + Requires v1.3.0 [79098fc4] + Rmath v0.8.0 [6c6a2e73] + Scratch v1.2.1 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.3.2 [3bb67fe8] + TranscodingStreams v0.11.3 [f5851436] + FFTW_jll v3.3.10+3 [0234f1f7] + HDF5_jll v1.14.5+0 [e33a78d0] + Hwloc_jll v2.12.0+0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [856f044c] + MKL_jll v2025.0.1+1 [7cb0a576] + MPICH_jll v4.3.0+0 [f1f71cc9] + MPItrampoline_jll v5.5.2+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.7+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [477f73a3] + libaec_jll v1.1.3+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Building RegressionDynamicCausalModeling → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/cfcaa1acb988d8e175767e4665e32042b1998f2d/build.log` Installation completed after 21.75s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 6454.2 ms ✓ TestEnv 1 dependency successfully precompiled in 9 seconds. 25 already precompiled. Precompiling package dependencies... ERROR: LoadError: The following 1 direct dependency failed to precompile: JET Failed to precompile JET [c3a54625-cd67-489e-a8e7-0a5a0ff4e31b] to "/home/pkgeval/.julia/compiled/v1.12/JET/jl_8JJrm9". WARNING: Imported binding Compiler.istopfunction was undeclared at import time during import to JET. ERROR: LoadError: UndefVarError: `LineInfoNode` not defined in `JET` Stacktrace: [1] top-level scope @ ~/.julia/packages/JET/sQkqi/src/JETBase.jl:220 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:308 [3] top-level scope @ ~/.julia/packages/JET/sQkqi/src/JET.jl:36 [4] include(mod::Module, _path::String) @ Base ./Base.jl:307 [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3004 [6] top-level scope @ stdin:6 [7] eval(m::Module, e::Any) @ Core ./boot.jl:488 [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2855 [9] include_string @ ./loading.jl:2865 [inlined] [10] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [11] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/JET/sQkqi/src/JETBase.jl:220 in expression starting at /home/pkgeval/.julia/packages/JET/sQkqi/src/JET.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 478.7s ################################################################################ # Testing # Testing RegressionDynamicCausalModeling Status `/tmp/jl_yaoKvs/Project.toml` [4c88cf16] Aqua v0.8.11 [c3a54625] JET v0.9.18 [98e50ef6] JuliaFormatter v1.0.62 [23992714] MAT v0.10.7 [4fb452e6] RegressionDynamicCausalModeling v0.1.4 [56ddb016] Logging v1.11.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.12.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_yaoKvs/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.11 [e1450e63] BufferedStreams v1.2.2 [00ebfdb7] CSTParser v3.4.3 [da1fd8a2] CodeTracking v1.3.6 [944b1d66] CodecZlib v0.7.8 [a80b9123] CommonMark v0.8.15 [34da2185] Compat v4.16.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.20 [31c24e10] Distributions v0.25.117 [ffbed154] DocStringExtensions v0.9.3 [7a1cc6ca] FFTW v1.8.1 [1a297f60] FillArrays v1.13.0 [c27321d9] Glob v1.3.1 [f67ccb44] HDF5 v0.17.2 [34004b35] HypergeometricFunctions v0.3.27 [92d709cd] IrrationalConstants v0.2.4 [c3a54625] JET v0.9.18 [692b3bcd] JLLWrappers v1.7.0 [98e50ef6] JuliaFormatter v1.0.62 [aa1ae85d] JuliaInterpreter v0.9.41 [70703baa] JuliaSyntax v0.4.10 [2ab3a3ac] LogExpFunctions v0.3.29 [6f1432cf] LoweredCodeUtils v3.1.0 [23992714] MAT v0.10.7 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.15 [e1d29d7a] Missings v1.2.0 [bac558e1] OrderedCollections v1.8.0 [90014a1f] PDMats v0.11.32 [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [92933f4c] ProgressMeter v1.10.2 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [189a3867] Reexport v1.2.2 [4fb452e6] RegressionDynamicCausalModeling v0.1.4 [ae029012] Requires v1.3.0 [79098fc4] Rmath v0.8.0 [6c6a2e73] Scratch v1.2.1 [a2af1166] SortingAlgorithms v1.2.1 [276daf66] SpecialFunctions v2.5.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 [4c63d2b9] StatsFuns v1.3.2 [0796e94c] Tokenize v0.5.29 [3bb67fe8] TranscodingStreams v0.11.3 [f5851436] FFTW_jll v3.3.10+3 [0234f1f7] HDF5_jll v1.14.5+0 [e33a78d0] Hwloc_jll v2.12.0+0 [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0 [856f044c] MKL_jll v2025.0.1+1 [7cb0a576] MPICH_jll v4.3.0+0 [f1f71cc9] MPItrampoline_jll v5.5.2+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.7+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [477f73a3] libaec_jll v1.1.3+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.11.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2024.12.31 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.0.16+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.5.0+2 Testing Running tests... Precompiling packages... Info Given JET was explicitly requested, output will be shown live  WARNING: Imported binding Compiler.istopfunction was undeclared at import time during import to JET. ERROR: LoadError: UndefVarError: `LineInfoNode` not defined in `JET` Stacktrace:  [1] top-level scope  @ ~/.julia/packages/JET/sQkqi/src/JETBase.jl:220  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:308  [3] top-level scope  @ ~/.julia/packages/JET/sQkqi/src/JET.jl:36  [4] include(mod::Module, _path::String)  @ Base ./Base.jl:307  [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3004  [6] top-level scope  @ stdin:6  [7] eval(m::Module, e::Any)  @ Core ./boot.jl:488  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2855  [9] include_string  @ ./loading.jl:2865 [inlined]  [10] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:326  [11] _start()  @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/JET/sQkqi/src/JETBase.jl:220 in expression starting at /home/pkgeval/.julia/packages/JET/sQkqi/src/JET.jl:1 in expression starting at stdin:6 ✗ JET 0 dependencies successfully precompiled in 12 seconds. 35 already precompiled. ERROR: LoadError: The following 1 direct dependency failed to precompile: JET Failed to precompile JET [c3a54625-cd67-489e-a8e7-0a5a0ff4e31b] to "/home/pkgeval/.julia/compiled/v1.12/JET/jl_t70Xky". WARNING: Imported binding Compiler.istopfunction was undeclared at import time during import to JET. ERROR: LoadError: UndefVarError: `LineInfoNode` not defined in `JET` Stacktrace: [1] top-level scope @ ~/.julia/packages/JET/sQkqi/src/JETBase.jl:220 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:308 [3] top-level scope @ ~/.julia/packages/JET/sQkqi/src/JET.jl:36 [4] include(mod::Module, _path::String) @ Base ./Base.jl:307 [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3004 [6] top-level scope @ stdin:6 [7] eval(m::Module, e::Any) @ Core ./boot.jl:488 [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2855 [9] include_string @ ./loading.jl:2865 [inlined] [10] exec_options(opts::Base.JLOptions) @ Base ./client.jl:326 [11] _start() @ Base ./client.jl:560 in expression starting at /home/pkgeval/.julia/packages/JET/sQkqi/src/JETBase.jl:220 in expression starting at /home/pkgeval/.julia/packages/JET/sQkqi/src/JET.jl:1 in expression starting at stdin: in expression starting at /home/pkgeval/.julia/packages/RegressionDynamicCausalModeling/EgHu2/test/runtests.jl:2 Testing failed after 32.23s ERROR: LoadError: Package RegressionDynamicCausalModeling errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2365 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2220 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:486 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:164 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:307 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [12] _start() @ Base ./client.jl:560 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 568.91s: package fails to precompile