Package evaluation of JUDI on Julia 1.12.0-DEV.2044 (c78016e4dc*) started at 2025-02-25T23:13:56.721 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 7.16s ################################################################################ # Installation # Installing JUDI... Resolving package versions... Installed JUDI ─ v4.0.2 Updating `~/.julia/environments/v1.12/Project.toml` [f3b833dc] + JUDI v4.0.2 Updating `~/.julia/environments/v1.12/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [7f219486] + AbstractNFFTs v0.8.2 [7d9f7c33] + Accessors v0.1.42 [dce04be8] + ArgCheck v2.4.0 [198e06fe] + BangBang v0.4.4 [9718e550] + Baselet v0.1.1 [26cce99e] + BasicInterpolators v0.7.1 [d360d2e6] + ChainRulesCore v1.25.1 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [992eb4ea] + CondaPkg v0.2.25 [187b0558] + ConstructionBase v1.5.8 [6add18c4] + ContextVariablesX v0.1.3 ⌅ [717857b8] + DSP v0.7.10 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [39dd38d3] + Dierckx v0.5.4 [aaf54ef3] + DistributedArrays v0.6.7 [ffbed154] + DocStringExtensions v0.9.3 [7a1cc6ca] + FFTW v1.8.1 [cc61a311] + FLoops v0.2.2 [b9860ae5] + FLoopsBase v0.1.1 [22cec73e] + InitialValues v0.3.1 [505f98c9] + InplaceOps v0.3.0 [18e54dd8] + IntegerMathUtils v0.1.2 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [42fd0dbc] + IterativeSolvers v0.9.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [bb331ad6] + JOLI v0.9.0 [0f8b85d8] + JSON3 v1.14.1 [f3b833dc] + JUDI v4.0.2 [b14d175d] + JuliaVariables v0.2.4 [2ab3a3ac] + LogExpFunctions v0.3.29 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.15 [c03570c3] + Memoize v0.4.4 [128add7d] + MicroCollections v0.2.0 [0b3b1443] + MicroMamba v0.1.14 [efe261a4] + NFFT v0.13.6 [71a1bf82] + NameResolution v0.1.5 [4d1e1d77] + Nullables v1.0.0 [bac558e1] + OrderedCollections v1.8.0 [69de0a69] + Parsers v2.8.1 [fa939f87] + Pidfile v1.3.0 [f27b6e38] + Polynomials v4.0.17 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [8162dcfd] + PrettyPrint v0.2.0 [27ebfcd6] + Primes v0.5.6 [6099a3de] + PythonCall v0.9.24 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.0 [6c6a2e73] + Scratch v1.2.1 [157a0f19] + SegyIO v0.8.5 [efcf1570] + Setfield v1.1.2 [276daf66] + SpecialFunctions v2.5.0 [171d559e] + SplittablesBase v0.1.15 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [856f2bd8] + StructTypes v1.11.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [28d57a85] + Transducers v0.4.84 [e17b2a0c] + UnsafePointers v1.0.0 ⌅ [29a6e085] + Wavelets v0.9.5 [cd4c43a9] + Dierckx_jll v0.2.0+0 [f5851436] + FFTW_jll v3.3.10+3 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [856f044c] + MKL_jll v2025.0.1+1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f8abcde7] + micromamba_jll v1.5.8+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [4d7b5844] + pixi_jll v0.41.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building JUDI → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/94ee75d05120a881c1c1fc8c7632f353843ec400/build.log` Installation completed after 269.97s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 1095.43s ################################################################################ # Testing # Testing JUDI Status `/tmp/jl_cKieWV/Project.toml` ⌅ [4c88cf16] Aqua v0.5.6 [d360d2e6] ChainRulesCore v1.25.1 ⌅ [717857b8] DSP v0.7.10 [39dd38d3] Dierckx v0.5.4 [7a1cc6ca] FFTW v1.8.1 ⌅ [587475ba] Flux v0.14.25 [033835bb] JLD2 v0.5.11 [bb331ad6] JOLI v0.9.0 [f3b833dc] JUDI v4.0.2 [bac558e1] OrderedCollections v1.8.0 [6099a3de] PythonCall v0.9.24 [ae029012] Requires v1.3.0 [157a0f19] SegyIO v0.8.5 [a759f4b9] TimerOutputs v0.5.27 [8ba89e20] Distributed v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_cKieWV/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [7f219486] AbstractNFFTs v0.8.2 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.2.0 [66dad0bd] AliasTables v1.1.3 ⌅ [4c88cf16] Aqua v0.5.6 [dce04be8] ArgCheck v2.4.0 [a9b6321e] Atomix v1.1.0 [198e06fe] BangBang v0.4.4 [9718e550] Baselet v0.1.1 [26cce99e] BasicInterpolators v0.7.1 [fa961155] CEnum v0.5.0 [082447d4] ChainRules v1.72.3 [d360d2e6] ChainRulesCore v1.25.1 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.16.0 [a33af91c] CompositionsBase v0.1.2 [992eb4ea] CondaPkg v0.2.25 [187b0558] ConstructionBase v1.5.8 [6add18c4] ContextVariablesX v0.1.3 ⌅ [717857b8] DSP v0.7.10 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.20 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [8bb1440f] DelimitedFiles v1.9.1 [39dd38d3] Dierckx v0.5.4 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [aaf54ef3] DistributedArrays v0.6.7 [ffbed154] DocStringExtensions v0.9.3 [e2ba6199] ExprTools v0.1.10 [7a1cc6ca] FFTW v1.8.1 [cc61a311] FLoops v0.2.2 [b9860ae5] FLoopsBase v0.1.1 [5789e2e9] FileIO v1.16.6 [1a297f60] FillArrays v1.13.0 ⌅ [587475ba] Flux v0.14.25 [f6369f11] ForwardDiff v0.10.38 ⌅ [d9f16b24] Functors v0.4.12 [0c68f7d7] GPUArrays v11.2.2 [46192b85] GPUArraysCore v0.2.0 [076d061b] HashArrayMappedTries v0.2.0 [7869d1d1] IRTools v0.4.14 [22cec73e] InitialValues v0.3.1 [505f98c9] InplaceOps v0.3.0 [18e54dd8] IntegerMathUtils v0.1.2 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [42fd0dbc] IterativeSolvers v0.9.4 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.5.11 [692b3bcd] JLLWrappers v1.7.0 [bb331ad6] JOLI v0.9.0 [0f8b85d8] JSON3 v1.14.1 [f3b833dc] JUDI v4.0.2 [b14d175d] JuliaVariables v0.2.4 [63c18a36] KernelAbstractions v0.9.34 [929cbde3] LLVM v9.2.0 [2ab3a3ac] LogExpFunctions v0.3.29 [c2834f40] MLCore v1.0.0 ⌃ [7e8f7934] MLDataDevices v1.5.3 [d8e11817] MLStyle v0.4.17 [f1d291b0] MLUtils v0.4.7 [1914dd2f] MacroTools v0.5.15 [c03570c3] Memoize v0.4.4 [128add7d] MicroCollections v0.2.0 [0b3b1443] MicroMamba v0.1.14 [e1d29d7a] Missings v1.2.0 [efe261a4] NFFT v0.13.6 [872c559c] NNlib v0.9.27 [77ba4419] NaNMath v1.1.2 [71a1bf82] NameResolution v0.1.5 [4d1e1d77] Nullables v1.0.0 [0b1bfda6] OneHotArrays v0.2.6 ⌅ [3bd65402] Optimisers v0.3.4 [bac558e1] OrderedCollections v1.8.0 [69de0a69] Parsers v2.8.1 [fa939f87] Pidfile v1.3.0 [f27b6e38] Polynomials v4.0.17 [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [8162dcfd] PrettyPrint v0.2.0 [27ebfcd6] Primes v0.5.6 [33c8b6b6] ProgressLogging v0.1.4 [43287f4e] PtrArrays v1.3.0 [6099a3de] PythonCall v0.9.24 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.0 [7e506255] ScopedValues v1.3.0 [6c6a2e73] Scratch v1.2.1 [157a0f19] SegyIO v0.8.5 [efcf1570] Setfield v1.1.2 [605ecd9f] ShowCases v0.1.0 [699a6c99] SimpleTraits v0.9.4 [a2af1166] SortingAlgorithms v1.2.1 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.5.0 [171d559e] SplittablesBase v0.1.15 [90137ffa] StaticArrays v1.9.12 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 [09ab397b] StructArrays v0.7.0 [856f2bd8] StructTypes v1.11.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [a759f4b9] TimerOutputs v0.5.27 [3bb67fe8] TranscodingStreams v0.11.3 [28d57a85] Transducers v0.4.84 [013be700] UnsafeAtomics v0.3.0 [e17b2a0c] UnsafePointers v1.0.0 ⌅ [29a6e085] Wavelets v0.9.5 ⌅ [e88e6eb3] Zygote v0.6.75 [700de1a5] ZygoteRules v0.2.7 [cd4c43a9] Dierckx_jll v0.2.0+0 [f5851436] FFTW_jll v3.3.10+3 [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0 [dad2f222] LLVMExtra_jll v0.0.35+0 [856f044c] MKL_jll v2025.0.1+1 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f8abcde7] micromamba_jll v1.5.8+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [4d7b5844] pixi_jll v0.41.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.11.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2024.12.31 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.0.16+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... Info Given JUDI was explicitly requested, output will be shown live   CondaPkg Found dependencies: /home/pkgeval/.julia/packages/JUDI/ybio2/CondaPkg.toml  CondaPkg Found dependencies: /home/pkgeval/.julia/packages/JOLI/2dSnd/CondaPkg.toml  CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/WMWY0/CondaPkg.toml  CondaPkg Resolving changes  + devito (pip)  + libstdcxx-ng  + matplotlib  + openssl  + pyrevolve (pip)  + python  + pywavelets  + uv  CondaPkg Initialising pixi  │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi  │ init  │ --format pixi  └ /tmp/jl_cKieWV/.CondaPkg ✔ Created /tmp/jl_cKieWV/.CondaPkg/pixi.toml  CondaPkg Wrote /tmp/jl_cKieWV/.CondaPkg/pixi.toml  │ [dependencies]  │ openssl = ">=3, <3.1"  │ uv = ">=0.4"  │ libstdcxx-ng = ">=3.4,<13.0"  │ matplotlib = "*"  │ pywavelets = "*"  │  │ [dependencies.python]  │ channel = "conda-forge"  │ build = "*cpython*"  │ version = ">3.8, >=3.8,<4"  │  │ [project]  │ name = ".CondaPkg"  │ platforms = ["linux-64"]  │ channels = ["conda-forge"]  │ channel-priority = "disabled"  │ description = "automatically generated by CondaPkg.jl"  │  │ [pypi-dependencies]  │ pyrevolve = "==2.2.4"  └ devito = ">=4.8.11"  CondaPkg Installing packages  │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi  │ install  └ --manifest-path /tmp/jl_cKieWV/.CondaPkg/pixi.toml ✔ The default environment has been installed. WARNING: Constructor for type "IndexStyle" was extended in `JUDI` without explicit qualification or import.  NOTE: Assumed "IndexStyle" refers to `Base.IndexStyle`. This behavior is deprecated and may differ in future versions.`  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function IndexStyle end`.  Hint: To silence the warning, qualify `IndexStyle` as `Base.IndexStyle` or explicitly `import Base: IndexStyle` WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. 78544.3 ms ✓ JUDI 1 dependency successfully precompiled in 80 seconds. 132 already precompiled. 1 dependency had output during precompilation: ┌ JUDI │ [Output was shown above] └ WARNING: Constructor for type "IndexStyle" was extended in `JUDI` without explicit qualification or import. NOTE: Assumed "IndexStyle" refers to `Base.IndexStyle`. This behavior is deprecated and may differ in future versions.` NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function IndexStyle end`. Hint: To silence the warning, qualify `IndexStyle` as `Base.IndexStyle` or explicitly `import Base: IndexStyle` WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. Scanning ... /home/pkgeval/.julia/packages/JUDI/ybio2/src/../data/unit_test_shot_records_1.segy ┌ Warning: Fixed length trace flag set in stream: IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=3880, maxsize=Inf, ptr=3601, mark=-1) └ @ SegyIO ~/.julia/packages/SegyIO/OfiKG/src/read/read_file.jl:36 Test Summary: | Pass Total Time Geometry Unit Test with 1 sources | 78 78 20.5s Scanning ... /home/pkgeval/.julia/packages/JUDI/ybio2/src/../data/unit_test_shot_records_2.segy ┌ Warning: Fixed length trace flag set in stream: IOBuffer(data=UInt8[...], readable=true, writable=false, seekable=true, append=false, size=3880, maxsize=Inf, ptr=3601, mark=-1) └ @ SegyIO ~/.julia/packages/SegyIO/OfiKG/src/read/read_file.jl:36 Test Summary: | Pass Total Time Geometry Unit Test with 2 sources | 90 90 5.6s Scanning ... /home/pkgeval/.julia/packages/JUDI/ybio2/src/../data/unit_test_shot_records_1.segy Test Summary: | Pass Total Time judiVector Unit Tests with 1 sources | 148 148 58.5s Scanning ... /home/pkgeval/.julia/packages/JUDI/ybio2/src/../data/unit_test_shot_records_2.segy (k1, k2) = (Tuple{Float32, Float32}[(1.0, 0.0), (2.0, 0.25)], Tuple{Float32, Float32}[(0.5, 0.0), (1.5, 0.25)]) Test Summary: | Pass Total Time judiVector Unit Tests with 2 sources | 226 226 23.4s Test Summary: | Pass Total Time judiVStack Unit Tests with 1 sources | 91 91 19.5s Test Summary: | Pass Total Time judiVStack Unit Tests with 2 sources | 91 91 0.1s Test Summary: | Pass Total Time judiWeights Unit Tests with 1 sources | 72 72 3.6s Test Summary: | Pass Total Time judiWeights Unit Tests with 2 sources | 74 74 0.1s Test Summary: | Pass Total Time judiWavefield Unit Tests with 1 sources | 33 33 21.5s Test Summary: | Pass Total Time judiWavefield Unit Tests with 2 sources | 35 35 1.4s ┌ Warning: Deprecated model.n, use size(model) │ caller = ip:0x0 └ @ Core :-1 ┌ Warning: Deprecated model.d, use spacing(model) │ caller = ip:0x0 └ @ Core :-1 ┌ Warning: Deprecated model.o, use origin(model) │ caller = ip:0x0 └ @ Core :-1 Test Summary: | Pass Total Time judiModeling Unit Test with 1 sources | 86 86 20.9s Test Summary: | Pass Total Time judiModeling Unit Test with 2 sources | 86 86 13.8s Test Summary: | Pass Total Time judiPointSourceModeling Unit Test with 1 sources | 95 95 16.1s Test Summary: | Pass Total Time judiPointSourceModeling Unit Test with 2 sources | 101 101 14.3s Test Summary: | Pass Total Time judiDataModeling Unit Test with 1 sources | 92 92 13.2s Test Summary: | Pass Total Time judiDataModeling Unit Test with 2 sources | 98 98 13.4s Test Summary: | Pass Total Time judiDataSourceModeling Unit Test with 1 sources | 87 87 10.1s Test Summary: | Pass Total Time judiDataSourceModeling Unit Test with 2 sources | 93 93 8.6s Test Summary: | Pass Total Time judiJacobian Unit Test with 1 sources | 22 22 2.9s Test Summary: | Pass Total Time judiJacobian Unit Test with 2 sources | 25 25 4.3s Test Summary: | Pass Total Time judiJacobianExtended Unit Test with 1 sources | 22 22 5.8s Test Summary: | Pass Total Time judiJacobianExtended Unit Test with 2 sources | 24 24 3.9s Test Summary: | Pass Total Time judiProjection Unit Test with 1 sources | 10 10 0.3s Test Summary: | Pass Total Time judiProjection Unit Test with 2 sources | 13 13 0.0s Test Summary: | Pass Total Time judiLRWF Unit Test with 1 sources | 14 14 0.0s Test Summary: | Pass Total Time judiLRWF Unit Test with 2 sources | 18 18 0.0s ┌ Warning: JOLI linear operator, returning julia Array └ @ JUDI ~/.julia/packages/JUDI/ybio2/src/TimeModeling/Types/ModelStructure.jl:227 ┌ Warning: JOLI linear operator, returning julia Array └ @ JUDI ~/.julia/packages/JUDI/ybio2/src/TimeModeling/Types/ModelStructure.jl:227 Test Summary: | Pass Total Time PhysicalParameter Unit Tests in 2 dimensions | 103 103 30.6s ┌ Warning: JOLI linear operator, returning julia Array └ @ JUDI ~/.julia/packages/JUDI/ybio2/src/TimeModeling/Types/ModelStructure.jl:227 ┌ Warning: JOLI linear operator, returning julia Array └ @ JUDI ~/.julia/packages/JUDI/ybio2/src/TimeModeling/Types/ModelStructure.jl:227 Test Summary: | Pass Total Time PhysicalParameter Unit Tests in 3 dimensions | 105 105 29.7s ┌ Warning: Info is deprecated and will be removed in future versions │ caller = top-level scope at test_compat.jl:12 └ @ Core ~/.julia/packages/JUDI/ybio2/test/test_compat.jl:12 Test Summary: | Pass Total Time Backward compatibility | 11 11 9.9s Precompiling packages... 10868.1 ms ✓ micromamba_jll 6713.3 ms ✓ MicroMamba 36253.3 ms ✓ JUDI Info Given JLD2JUDIExt was explicitly requested, output will be shown live  ┌ Warning: Module JUDI with build ID fafbfcfd-437e-461a-0019-a09802869390 is missing from the cache. │ This may mean JUDI [f3b833dc-6b2e-5b9c-b940-873ed6319979] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2644 542.4 ms ? JUDI → JLD2JUDIExt 3 dependencies successfully precompiled in 55 seconds. 133 already precompiled. 1 dependency precompiled but a different version is currently loaded. Restart julia to access the new version. Otherwise, loading dependents of this package may trigger further precompilation to work with the unexpected version. 1 dependencies failed but may be precompilable after restarting julia 2 dependencies had output during precompilation: ┌ JUDI → JLD2JUDIExt │ [Output was shown above] └ ┌ JUDI │ WARNING: Constructor for type "IndexStyle" was extended in `JUDI` without explicit qualification or import. │ NOTE: Assumed "IndexStyle" refers to `Base.IndexStyle`. This behavior is deprecated and may differ in future versions.` │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function IndexStyle end`. │ Hint: To silence the warning, qualify `IndexStyle` as `Base.IndexStyle` or explicitly `import Base: IndexStyle` │ WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). │ You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. │ To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. │ WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). │ You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. │ To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. └ ┌ Warning: Module JUDI with build ID fafbfcfd-437e-461a-0019-a09802869390 is missing from the cache. │ This may mean JUDI [f3b833dc-6b2e-5b9c-b940-873ed6319979] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2644 Test Summary: | Pass Total Time Test issue #83 | 201 201 0.3s ┌ Warning: the following fields are present in type judiVector{Float32, Matrix{Float32}} saved in the file but not present in the type in the workspace: │ │ name │ m │ n, │ │ Data in these fields will not be accessible └ @ JLD2 ~/.julia/packages/JLD2/nPYlZ/src/data/reconstructing_datatypes.jl:237 ┌ Warning: saved type GeometryIC{Float32} is missing field taxis in workspace type; reconstructing └ @ JLD2 ~/.julia/packages/JLD2/nPYlZ/src/data/reconstructing_datatypes.jl:193 ┌ Warning: read type StepRangeLen{Float32, Float64, Float64} is not a leaf type in workspace; reconstructing └ @ JLD2 ~/.julia/packages/JLD2/nPYlZ/src/data/reconstructing_datatypes.jl:278 dat.geometry = GeometryIC{Float32} wiht 15 sources Test Summary: | Pass Total Time Test backward comp issue | 3 3 59.8s Building forward operator /tmp/jl_cKieWV/.CondaPkg/.pixi/envs/default/lib/python3.11/site-packages/numpy/_core/getlimits.py:558: UserWarning: The value of the smallest subnormal for type is zero. setattr(self, word, getattr(machar, word).flat[0]) /tmp/jl_cKieWV/.CondaPkg/.pixi/envs/default/lib/python3.11/site-packages/numpy/_core/getlimits.py:90: UserWarning: The value of the smallest subnormal for type is zero. return self._float_to_str(self.smallest_subnormal) Operator `forward` ran in 3.79 s Scanning ... /home/pkgeval/.julia/packages/JUDI/ybio2/test/test_wri_1500.0_0.0_20.0.segy Operator `forward` ran in 3.77 s Building forward operator Operator `adjoint` ran in 3.91 s Operator `forward_grad` ran in 4.85 s Test Summary: | Pass Total Time Test issue #130 | 5 5 1m12.7s Building forward operator Operator `forward` ran in 3.54 s Operator `forward` ran in 3.50 s Test Summary: | Pass Total Time Test issue #140 | 1 1 15.9s Operator `forward` ran in 3.74 s Building forward operator Operator `forward` ran in 3.77 s Building adjoint born operator Operator `gradient` ran in 3.87 s Operator `forward` ran in 3.78 s Operator `gradient` ran in 3.91 s Building born operator Operator `born` ran in 6.08 s Building adjoint born operator Operator `gradient` ran in 3.85 s Operator `born` ran in 6.10 s Operator `gradient` ran in 3.87 s Operator `forward` ran in 3.74 s Operator `gradient` ran in 3.88 s Operator `forward` ran in 3.76 s Operator `gradient` ran in 3.86 s Test Summary: | Pass Total Time Tests limit_m issue 156 | 17 17 1m46.5s ┌ Warning: `isbindingresolved(m::Module, var::Symbol)` is deprecated, use `true` instead. │ caller = walkmodules(f::Aqua.var"#detect_unbound_args_recursively##0#detect_unbound_args_recursively##1"{Vector{Any}}, x::Module) at exports.jl:5 └ @ Core ~/.julia/packages/Aqua/bqhPD/src/exports.jl:5 ┌ Warning: `isbindingresolved(m::Module, var::Symbol)` is deprecated, use `true` instead. │ caller = walkmodules(f::Aqua.var"#undefined_exports##0#undefined_exports##1"{Vector{Symbol}}, x::Module) at exports.jl:5 └ @ Core ~/.julia/packages/Aqua/bqhPD/src/exports.jl:5 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1464 running 1 of 2 signal (10): User defined signal 1 unknown function (ip: 0x76e7052e5f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:333 #start_profile_listener##0 at ./Base.jl:353 jfptr_YY.start_profile_listenerYY.YY.0_55918.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2303 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) _ZN4llvm8DenseMapIPNS_4PassEPNS_13AnalysisUsageENS_12DenseMapInfoIS2_vEENS_6detail12DenseMapPairIS2_S4_EEE4growEj at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm17PMTopLevelManager17findAnalysisUsageEPNS_4PassE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm17PMTopLevelManager12schedulePassEPNS_4PassE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm16TargetPassConfig7addPassEPNS_4PassE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm16TargetPassConfig25addMachineSSAOptimizationEv at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm16TargetPassConfig16addMachinePassesEv at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZL23addPassesToGenerateCodeRN4llvm17LLVMTargetMachineERNS_6legacy15PassManagerBaseEbRNS_28MachineModuleInfoWrapperPassE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm17LLVMTargetMachine17addPassesToEmitMCERNS_6legacy15PassManagerBaseERPNS_9MCContextERNS_17raw_pwrite_streamEb at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1683 addModule at /source/src/jitlayers.cpp:2159 jl_compile_codeinst_now at /source/src/jitlayers.cpp:626 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:946 jl_compile_method_internal at /source/src/gf.c:2985 _jl_invoke at /source/src/gf.c:3467 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2303 [inlined] jl_module_run_initializer at /source/src/toplevel.c:75 run_module_init at ./loading.jl:1424 register_restored_modules at ./loading.jl:1412 #_include_from_serialized#859 at ./loading.jl:1300 _include_from_serialized at ./loading.jl:1246 [inlined] _include_from_serialized at ./loading.jl:1246 [inlined] #_require_search_from_serialized#876 at ./loading.jl:2113 _require_search_from_serialized at ./loading.jl:2020 jfptr__require_search_from_serialized_111691.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 __require_prelocked at ./loading.jl:2630 _require_prelocked at ./loading.jl:2493 _require_prelocked at ./loading.jl:2487 [inlined] macro expansion at ./lock.jl:376 [inlined] __require at ./loading.jl:2485 jfptr___require_64019.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2303 [inlined] jl_f__call_in_world at /source/src/builtins.c:902 #invoke_in_world#2 at ./essentials.jl:1092 [inlined] invoke_in_world at ./essentials.jl:1088 [inlined] require at ./loading.jl:2483 [inlined] iterate at ./generator.jl:48 [inlined] _collect at ./array.jl:810 collect_similar at ./array.jl:732 [inlined] map at ./abstractarray.jl:3361 [inlined] test_ambiguities_impl at /home/pkgeval/.julia/packages/Aqua/bqhPD/src/ambiguities.jl:178 unknown function (ip: 0x76e703e030f9) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2303 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:692 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897 jl_toplevel_eval_flex at /source/src/toplevel.c:1032 jl_toplevel_eval_flex at /source/src/toplevel.c:972 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 eval at ./boot.jl:488 exec_options at ./client.jl:294 _start at ./client.jl:560 jfptr__start_60003.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2303 [inlined] true_main at /source/src/jlapi.c:964 jl_repl_entrypoint at /source/src/jlapi.c:1124 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x76e705287249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1034 running 0 of 2 signal (10): User defined signal 1 unknown function (ip: 0x740134c4df14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:333 #start_profile_listener##0 at ./Base.jl:353 jfptr_YY.start_profile_listenerYY.YY.0_55918.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2303 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 [inlined] success at ./process.jl:556 jfptr_success_51831.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 success at ./process.jl:569 macro expansion at /home/pkgeval/.julia/packages/Aqua/bqhPD/src/ambiguities.jl:117 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.12/Test/src/Test.jl:676 [inlined] #_test_ambiguities#8 at /home/pkgeval/.julia/packages/Aqua/bqhPD/src/ambiguities.jl:117 _test_ambiguities at /home/pkgeval/.julia/packages/Aqua/bqhPD/src/ambiguities.jl:90 [inlined] #test_ambiguities#6 at /home/pkgeval/.julia/packages/Aqua/bqhPD/src/ambiguities.jl:27 [inlined] test_ambiguities at /home/pkgeval/.julia/packages/Aqua/bqhPD/src/ambiguities.jl:27 unknown function (ip: 0x7400fdef0782) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2303 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:692 eval_body at /source/src/interpreter.c:557 eval_body at /source/src/interpreter.c:557 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897 jl_toplevel_eval_flex at /source/src/toplevel.c:1032 jl_toplevel_eval_flex at /source/src/toplevel.c:972 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 eval at ./boot.jl:488 include_string at ./loading.jl:2855 _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 _include at ./loading.jl:2915 include at ./Base.jl:308 IncludeInto at ./Base.jl:309 jfptr_IncludeInto_112134.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2303 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:692 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897 jl_toplevel_eval_flex at /source/src/toplevel.c:1032 jl_toplevel_eval_flex at /source/src/toplevel.c:972 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 eval at ./boot.jl:488 exec_options at ./client.jl:294 _start at ./client.jl:560 jfptr__start_60003.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2303 [inlined] true_main at /source/src/jlapi.c:964 jl_repl_entrypoint at /source/src/jlapi.c:1124 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x740134bef249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 2 signal (10): User defined signal 1 unknown function (ip: 0x7f6446e4af14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:333 #start_profile_listener##0 at ./Base.jl:353 jfptr_YY.start_profile_listenerYY.YY.0_55918.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2303 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 jfptr_wait_75189.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 subprocess_handler at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2383 unknown function (ip: 0x7f643d292593) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 #202 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2323 withenv at ./env.jl:265 #187 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2144 with_temp_env at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2002 #183 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2111 #mktempdir#21 at ./file.jl:899 unknown function (ip: 0x7f643d28d6ac) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 mktempdir at ./file.jl:895 mktempdir at ./file.jl:895 #sandbox#179 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2058 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2050 unknown function (ip: 0x7f643d2841e9) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 #test#190 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2308 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2220 [inlined] #test#170 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:486 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:465 unknown function (ip: 0x7f643d2833f1) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 #test#84 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:164 unknown function (ip: 0x7f643d27f258) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:153 #test#82 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined] test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 unknown function (ip: 0x7f643d27868f) at (unknown file) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2303 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:692 eval_body at /source/src/interpreter.c:557 eval_body at /source/src/interpreter.c:557 jl_interpret_toplevel_thunk at /source/src/interpreter.c:897 jl_toplevel_eval_flex at /source/src/toplevel.c:1032 jl_toplevel_eval_flex at /source/src/toplevel.c:972 ijl_toplevel_eval at /source/src/toplevel.c:1044 ijl_toplevel_eval_in at /source/src/toplevel.c:1089 eval at ./boot.jl:488 include_string at ./loading.jl:2855 _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 _include at ./loading.jl:2915 include at ./Base.jl:307 exec_options at ./client.jl:328 _start at ./client.jl:560 jfptr__start_60003.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3475 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2303 [inlined] true_main at /source/src/jlapi.c:964 jl_repl_entrypoint at /source/src/jlapi.c:1124 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7f6446dec249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== [1464] signal 15: Terminated in expression starting at none:8 unknown function (ip: 0x76e7052e5f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) wait at /source/src/julia_locks.h:131 [inlined] jl_compile_codeinst_now at /source/src/jitlayers.cpp:730 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:946 jl_compile_method_internal at /source/src/gf.c:2985 _jl_invoke at /source/src/gf.c:3467 [inlined] ijl_apply_generic at /source/src/gf.c:3675 jl_apply at /source/src/julia.h:2303 [inlined] jl_f__call_latest at /source/src/builtins.c:883 [1034] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/JUDI/ybio2/test/runtests.jl:151 #invokelatest#1 at ./essentials.jl:1057 [inlined] invokelatest at ./essentials.jl:1053 [inlined] profile_printing_listener at ./Base.jl:335 _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) #start_profile_listener##0 at ./Base.jl:353 operator() at /source/src/jitlayers.cpp:1683 jfptr_YY.start_profile_listenerYY.YY.0_55918.1 at /opt/julia/lib/julia/sys.so (unknown line) addModule at /source/src/jitlayers.cpp:2159 PkgEval terminated after 2736.97s: test duration exceeded the time limit