Package evaluation of Bactos on Julia 1.12.0-DEV.2044 (c78016e4dc*) started at 2025-02-26T01:11:15.001


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# Set-up
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Installing PkgEval dependencies (TestEnv)...

Set-up completed after 7.86s


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# Installation
#

Installing Bactos...
   Resolving package versions...
   Installed OrdinaryDiffEqRKN ─────────────────── v1.1.0
   Installed OrdinaryDiffEqRosenbrock ──────────── v1.6.0
   Installed StatsFuns ─────────────────────────── v1.3.2
   Installed Accessors ─────────────────────────── v0.1.42
   Installed Preferences ───────────────────────── v1.4.3
   Installed HypergeometricFunctions ───────────── v0.3.27
   Installed OrdinaryDiffEqSDIRK ───────────────── v1.2.0
   Installed PDMats ────────────────────────────── v0.11.32
   Installed LoggingExtras ─────────────────────── v1.1.0
   Installed OrdinaryDiffEqStabilizedRK ────────── v1.1.0
   Installed FastGaussQuadrature ───────────────── v1.0.2
   Installed InlineStrings ─────────────────────── v1.4.3
   Installed TimerOutputs ──────────────────────── v0.5.27
   Installed SciMLJacobianOperators ────────────── v0.1.1
   Installed ConcurrentUtilities ───────────────── v2.5.0
   Installed ProgressMeter ─────────────────────── v1.10.2
   Installed Polyester ─────────────────────────── v0.7.16
   Installed NonlinearSolve ────────────────────── v4.4.0
   Installed StaticArrays ──────────────────────── v1.9.12
   Installed OrdinaryDiffEqPRK ─────────────────── v1.1.0
   Installed NearestNeighbors ──────────────────── v0.4.21
   Installed EnumX ─────────────────────────────── v1.0.4
   Installed ArrayTools ────────────────────────── v0.2.7
   Installed OpenSSL ───────────────────────────── v1.4.3
   Installed RecursiveArrayTools ───────────────── v3.31.0
   Installed MaybeInplace ──────────────────────── v0.1.4
   Installed OrdinaryDiffEqCore ────────────────── v1.18.1
   Installed FiniteDifferences ─────────────────── v0.12.32
   Installed FileIO ────────────────────────────── v1.16.6
   Installed InvertedIndices ───────────────────── v1.3.1
   Installed FunctionWrappers ──────────────────── v1.1.3
   Installed OrdinaryDiffEqAdamsBashforthMoulton ─ v1.2.0
   Installed IntelOpenMP_jll ───────────────────── v2025.0.4+0
   Installed Statistics ────────────────────────── v1.11.1
   Installed HTTP ──────────────────────────────── v1.10.15
   Installed OrdinaryDiffEqSSPRK ───────────────── v1.2.0
   Installed MetaGraphs ────────────────────────── v0.7.2
   Installed Static ────────────────────────────── v1.1.1
   Installed OrdinaryDiffEqVerner ──────────────── v1.1.1
   Installed Missings ──────────────────────────── v1.2.0
   Installed Distances ─────────────────────────── v0.10.12
   Installed DataFrames ────────────────────────── v1.7.0
   Installed FiniteDiff ────────────────────────── v2.27.0
   Installed MuladdMacro ───────────────────────── v0.2.4
   Installed RealDot ───────────────────────────── v0.1.0
   Installed JLD2 ──────────────────────────────── v0.4.54
   Installed IrrationalConstants ───────────────── v0.2.4
   Installed FastPower ─────────────────────────── v1.1.1
   Installed SIMDTypes ─────────────────────────── v0.1.0
   Installed ArnoldiMethod ─────────────────────── v0.4.0
   Installed CpuId ─────────────────────────────── v0.3.1
   Installed SimpleUnPack ──────────────────────── v1.1.0
   Installed PtrArrays ─────────────────────────── v1.3.0
   Installed DiffEqBase ────────────────────────── v6.164.1
   Installed JSON ──────────────────────────────── v0.21.4
   Installed SciMLBase ─────────────────────────── v2.75.1
   Installed OrdinaryDiffEqFIRK ────────────────── v1.7.0
   Installed Agents ────────────────────────────── v5.17.2
   Installed NonlinearSolveQuasiNewton ─────────── v1.2.0
   Installed OrdinaryDiffEqNonlinearSolve ──────── v1.5.0
   Installed SimpleBufferStream ────────────────── v1.2.0
   Installed ADTypes ───────────────────────────── v1.13.0
   Installed SentinelArrays ────────────────────── v1.4.8
   Installed BracketingNonlinearSolve ──────────── v1.1.0
   Installed SpecialFunctions ──────────────────── v2.5.0
   Installed LinearSolve ───────────────────────── v3.3.1
   Installed NonlinearSolveSpectralMethods ─────── v1.1.0
   Installed IfElse ────────────────────────────── v0.1.1
   Installed SimpleNonlinearSolve ──────────────── v2.1.0
   Installed LineSearch ────────────────────────── v0.1.4
   Installed StaticArraysCore ──────────────────── v1.4.3
   Installed NaNMath ───────────────────────────── v1.1.2
   Installed WorkerUtilities ───────────────────── v1.6.1
   Installed ThreadingUtilities ────────────────── v0.5.2
   Installed ManualMemory ──────────────────────── v0.1.8
   Installed NLSolversBase ─────────────────────── v7.8.3
   Installed TranscodingStreams ────────────────── v0.11.3
   Installed SparseMatrixColorings ─────────────── v0.4.13
   Installed Rmath_jll ─────────────────────────── v0.5.1+0
   Installed WeakRefStrings ────────────────────── v1.4.2
   Installed LightOSM ──────────────────────────── v0.2.11
   Installed MbedTLS ───────────────────────────── v1.1.9
   Installed LazyArrays ────────────────────────── v2.6.0
   Installed DataStructures ────────────────────── v0.18.20
   Installed CommonSubexpressions ──────────────── v0.3.1
   Installed StatsAPI ──────────────────────────── v1.7.0
   Installed Compat ────────────────────────────── v4.16.0
   Installed ExprTools ─────────────────────────── v0.1.10
   Installed CommonWorldInvalidations ──────────── v1.0.0
   Installed Graphs ────────────────────────────── v1.12.0
   Installed StaticArrayInterface ──────────────── v1.8.0
   Installed CodecZlib ─────────────────────────── v0.7.8
   Installed ExceptionUnwrapping ───────────────── v0.1.11
   Installed OrdinaryDiffEqLinear ──────────────── v1.1.0
   Installed StatsBase ─────────────────────────── v0.34.4
   Installed OrdinaryDiffEq ────────────────────── v6.91.0
   Installed ArrayLayouts ──────────────────────── v1.11.1
   Installed BitTwiddlingConvenienceFunctions ──── v0.1.6
   Installed SciMLStructures ───────────────────── v1.6.1
   Installed Scratch ───────────────────────────── v1.2.1
   Installed FunctionWrappersWrappers ──────────── v0.1.3
   Installed DiffRules ─────────────────────────── v1.15.1
   Installed GenericSchur ──────────────────────── v0.5.4
   Installed OrdinaryDiffEqExplicitRK ──────────── v1.1.0
   Installed oneTBB_jll ────────────────────────── v2022.0.0+0
   Installed QuickHeaps ────────────────────────── v0.1.2
   Installed LayoutPointers ────────────────────── v0.1.17
   Installed OrdinaryDiffEqPDIRK ───────────────── v1.2.0
   Installed OrdinaryDiffEqQPRK ────────────────── v1.1.0
   Installed DiffResults ───────────────────────── v1.1.0
   Installed TableTraits ───────────────────────── v1.0.1
   Installed OrdinaryDiffEqFunctionMap ─────────── v1.1.1
   Installed OrdinaryDiffEqLowOrderRK ──────────── v1.2.0
   Installed Inflate ───────────────────────────── v0.1.5
   Installed PrettyTables ──────────────────────── v2.4.0
   Installed SciMLOperators ────────────────────── v0.3.12
   Installed Parsers ───────────────────────────── v2.8.1
   Installed NonlinearSolveBase ────────────────── v1.5.0
   Installed PooledArrays ──────────────────────── v1.4.3
   Installed Bactos ────────────────────────────── v0.0.1
   Installed Setfield ──────────────────────────── v1.1.2
   Installed MKL_jll ───────────────────────────── v2025.0.1+1
   Installed JLLWrappers ───────────────────────── v1.7.0
   Installed ExproniconLite ────────────────────── v0.10.14
   Installed NonlinearSolveFirstOrder ──────────── v1.3.0
   Installed EnzymeCore ────────────────────────── v0.8.8
   Installed ConstructionBase ──────────────────── v1.5.8
   Installed DataValueInterfaces ───────────────── v1.0.0
   Installed OrderedCollections ────────────────── v1.8.0
   Installed FastClosures ──────────────────────── v0.3.2
   Installed OrdinaryDiffEqExponentialRK ───────── v1.3.0
   Installed PolyesterWeave ────────────────────── v0.2.2
   Installed ChainRulesCore ────────────────────── v1.25.1
   Installed Reexport ──────────────────────────── v1.2.2
   Installed ArrayInterface ────────────────────── v7.18.0
   Installed LineSearches ──────────────────────── v7.3.0
   Installed PreallocationTools ────────────────── v0.4.25
   Installed OrdinaryDiffEqTsit5 ───────────────── v1.1.0
   Installed OrdinaryDiffEqExtrapolation ───────── v1.4.0
   Installed LogExpFunctions ───────────────────── v0.3.29
   Installed Quaternions ───────────────────────── v0.7.6
   Installed CloseOpenIntervals ────────────────── v0.1.13
   Installed AliasTables ───────────────────────── v1.1.3
   Installed OrdinaryDiffEqLowStorageRK ────────── v1.2.1
   Installed Rotations ─────────────────────────── v1.7.1
   Installed MacroTools ────────────────────────── v0.5.15
   Installed Krylov ────────────────────────────── v0.9.10
   Installed CSV ───────────────────────────────── v0.10.15
   Installed MbedTLS_jll ───────────────────────── v2.28.6+1
   Installed CellListMap ───────────────────────── v0.8.32
   Installed OpenSpecFun_jll ───────────────────── v0.5.6+0
   Installed PackageExtensionCompat ────────────── v1.0.2
   Installed CompositionsBase ──────────────────── v0.1.2
   Installed UnPack ────────────────────────────── v1.0.2
   Installed OrdinaryDiffEqStabilizedIRK ───────── v1.2.0
   Installed InverseFunctions ──────────────────── v0.1.17
   Installed CommonSolve ───────────────────────── v0.2.4
   Installed GPUArraysCore ─────────────────────── v0.2.0
   Installed SimpleTraits ──────────────────────── v0.9.4
   Installed DocStringExtensions ───────────────── v0.9.3
   Installed ExponentialUtilities ──────────────── v1.27.0
   Installed Crayons ───────────────────────────── v4.1.1
   Installed OrdinaryDiffEqBDF ─────────────────── v1.2.0
   Installed Adapt ─────────────────────────────── v4.2.0
   Installed StrideArraysCore ──────────────────── v0.5.7
   Installed XML2_jll ──────────────────────────── v2.13.6+1
   Installed Rmath ─────────────────────────────── v0.8.0
   Installed OrdinaryDiffEqDifferentiation ─────── v1.4.0
   Installed OrdinaryDiffEqHighOrderRK ─────────── v1.1.0
   Installed RuntimeGeneratedFunctions ─────────── v0.5.13
   Installed BitFlags ──────────────────────────── v0.1.9
   Installed Jieko ─────────────────────────────── v0.2.1
   Installed OrdinaryDiffEqFeagin ──────────────── v1.1.0
   Installed CPUSummary ────────────────────────── v0.2.6
   Installed SimpleWeightedGraphs ──────────────── v1.4.0
   Installed DifferentiationInterface ──────────── v0.6.42
   Installed DataAPI ───────────────────────────── v1.16.0
   Installed Tables ────────────────────────────── v1.12.0
   Installed VertexSafeGraphs ──────────────────── v0.2.0
   Installed Moshi ─────────────────────────────── v0.3.5
   Installed StaticGraphs ──────────────────────── v0.3.0
   Installed RecipesBase ───────────────────────── v1.3.4
   Installed ConcreteStructs ───────────────────── v0.2.3
   Installed TruncatedStacktraces ──────────────── v1.4.0
   Installed Libiconv_jll ──────────────────────── v1.18.0+0
   Installed IteratorInterfaceExtensions ───────── v1.0.0
   Installed LaTeXStrings ──────────────────────── v1.4.0
   Installed URIs ──────────────────────────────── v1.5.1
   Installed PrecompileTools ───────────────────── v1.2.1
   Installed Richardson ────────────────────────── v1.4.2
   Installed FilePathsBase ─────────────────────── v0.9.23
   Installed SymbolicIndexingInterface ─────────── v0.3.38
   Installed TestItems ─────────────────────────── v0.1.1
   Installed FillArrays ────────────────────────── v1.13.0
   Installed ForwardDiff ───────────────────────── v0.10.38
   Installed OrdinaryDiffEqSymplecticRK ────────── v1.3.0
   Installed SpatialIndexing ───────────────────── v0.1.6
   Installed Requires ──────────────────────────── v1.3.0
   Installed QuadGK ────────────────────────────── v2.11.2
   Installed OrdinaryDiffEqDefault ─────────────── v1.3.0
   Installed FastBroadcast ─────────────────────── v0.3.5
   Installed OrdinaryDiffEqNordsieck ───────────── v1.1.0
   Installed LightXML ──────────────────────────── v0.9.1
   Installed Parameters ────────────────────────── v0.12.3
   Installed OrdinaryDiffEqIMEXMultistep ───────── v1.2.0
   Installed StringManipulation ────────────────── v0.4.1
   Installed SortingAlgorithms ─────────────────── v1.2.1
   Installed Distributions ─────────────────────── v0.25.117
   Installed SparseDiffTools ───────────────────── v2.23.1
  Installing 6 artifacts
   Installed artifact oneTBB      435.6 KiB
   Installed artifact Rmath       121.9 KiB
   Installed artifact Libiconv    1.9 MiB
   Installed artifact OpenSpecFun 194.9 KiB
   Installed artifact XML2        2.5 MiB
   Installed artifact MbedTLS     2.1 MiB
    Updating `~/.julia/environments/v1.12/Project.toml`
  [d33a0dba] + Bactos v0.0.1
    Updating `~/.julia/environments/v1.12/Manifest.toml`
  [47edcb42] + ADTypes v1.13.0
  [7d9f7c33] + Accessors v0.1.42
  [79e6a3ab] + Adapt v4.2.0
⌅ [46ada45e] + Agents v5.17.2
  [66dad0bd] + AliasTables v1.1.3
  [ec485272] + ArnoldiMethod v0.4.0
  [4fba245c] + ArrayInterface v7.18.0
  [4c555306] + ArrayLayouts v1.11.1
⌅ [1dc0ca97] + ArrayTools v0.2.7
  [d33a0dba] + Bactos v0.0.1
  [d1d4a3ce] + BitFlags v0.1.9
  [62783981] + BitTwiddlingConvenienceFunctions v0.1.6
  [70df07ce] + BracketingNonlinearSolve v1.1.0
  [2a0fbf3d] + CPUSummary v0.2.6
  [336ed68f] + CSV v0.10.15
⌅ [69e1c6dd] + CellListMap v0.8.32
  [d360d2e6] + ChainRulesCore v1.25.1
  [fb6a15b2] + CloseOpenIntervals v0.1.13
  [944b1d66] + CodecZlib v0.7.8
  [38540f10] + CommonSolve v0.2.4
  [bbf7d656] + CommonSubexpressions v0.3.1
  [f70d9fcc] + CommonWorldInvalidations v1.0.0
  [34da2185] + Compat v4.16.0
  [a33af91c] + CompositionsBase v0.1.2
  [2569d6c7] + ConcreteStructs v0.2.3
  [f0e56b4a] + ConcurrentUtilities v2.5.0
  [187b0558] + ConstructionBase v1.5.8
  [adafc99b] + CpuId v0.3.1
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [a93c6f00] + DataFrames v1.7.0
  [864edb3b] + DataStructures v0.18.20
  [e2d170a0] + DataValueInterfaces v1.0.0
  [2b5f629d] + DiffEqBase v6.164.1
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.15.1
  [a0c0ee7d] + DifferentiationInterface v0.6.42
  [b4f34e82] + Distances v0.10.12
  [31c24e10] + Distributions v0.25.117
  [ffbed154] + DocStringExtensions v0.9.3
  [4e289a0a] + EnumX v1.0.4
  [f151be2c] + EnzymeCore v0.8.8
  [460bff9d] + ExceptionUnwrapping v0.1.11
  [d4d017d3] + ExponentialUtilities v1.27.0
  [e2ba6199] + ExprTools v0.1.10
  [55351af7] + ExproniconLite v0.10.14
  [7034ab61] + FastBroadcast v0.3.5
  [9aa1b823] + FastClosures v0.3.2
  [442a2c76] + FastGaussQuadrature v1.0.2
  [a4df4552] + FastPower v1.1.1
  [5789e2e9] + FileIO v1.16.6
  [48062228] + FilePathsBase v0.9.23
  [1a297f60] + FillArrays v1.13.0
  [6a86dc24] + FiniteDiff v2.27.0
  [26cc04aa] + FiniteDifferences v0.12.32
  [f6369f11] + ForwardDiff v0.10.38
  [069b7b12] + FunctionWrappers v1.1.3
  [77dc65aa] + FunctionWrappersWrappers v0.1.3
  [46192b85] + GPUArraysCore v0.2.0
  [c145ed77] + GenericSchur v0.5.4
  [86223c79] + Graphs v1.12.0
  [cd3eb016] + HTTP v1.10.15
  [34004b35] + HypergeometricFunctions v0.3.27
  [615f187c] + IfElse v0.1.1
  [d25df0c9] + Inflate v0.1.5
  [842dd82b] + InlineStrings v1.4.3
  [3587e190] + InverseFunctions v0.1.17
  [41ab1584] + InvertedIndices v1.3.1
  [92d709cd] + IrrationalConstants v0.2.4
  [82899510] + IteratorInterfaceExtensions v1.0.0
⌅ [033835bb] + JLD2 v0.4.54
  [692b3bcd] + JLLWrappers v1.7.0
  [682c06a0] + JSON v0.21.4
  [ae98c720] + Jieko v0.2.1
  [ba0b0d4f] + Krylov v0.9.10
  [b964fa9f] + LaTeXStrings v1.4.0
  [10f19ff3] + LayoutPointers v0.1.17
  [5078a376] + LazyArrays v2.6.0
⌅ [d1922b25] + LightOSM v0.2.11
  [9c8b4983] + LightXML v0.9.1
  [87fe0de2] + LineSearch v0.1.4
  [d3d80556] + LineSearches v7.3.0
  [7ed4a6bd] + LinearSolve v3.3.1
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [e6f89c97] + LoggingExtras v1.1.0
  [1914dd2f] + MacroTools v0.5.15
  [d125e4d3] + ManualMemory v0.1.8
  [bb5d69b7] + MaybeInplace v0.1.4
  [739be429] + MbedTLS v1.1.9
⌅ [626554b9] + MetaGraphs v0.7.2
  [e1d29d7a] + Missings v1.2.0
  [2e0e35c7] + Moshi v0.3.5
  [46d2c3a1] + MuladdMacro v0.2.4
  [d41bc354] + NLSolversBase v7.8.3
  [77ba4419] + NaNMath v1.1.2
  [b8a86587] + NearestNeighbors v0.4.21
  [8913a72c] + NonlinearSolve v4.4.0
  [be0214bd] + NonlinearSolveBase v1.5.0
  [5959db7a] + NonlinearSolveFirstOrder v1.3.0
  [9a2c21bd] + NonlinearSolveQuasiNewton v1.2.0
  [26075421] + NonlinearSolveSpectralMethods v1.1.0
  [4d8831e6] + OpenSSL v1.4.3
  [bac558e1] + OrderedCollections v1.8.0
  [1dea7af3] + OrdinaryDiffEq v6.91.0
  [89bda076] + OrdinaryDiffEqAdamsBashforthMoulton v1.2.0
  [6ad6398a] + OrdinaryDiffEqBDF v1.2.0
  [bbf590c4] + OrdinaryDiffEqCore v1.18.1
  [50262376] + OrdinaryDiffEqDefault v1.3.0
  [4302a76b] + OrdinaryDiffEqDifferentiation v1.4.0
  [9286f039] + OrdinaryDiffEqExplicitRK v1.1.0
  [e0540318] + OrdinaryDiffEqExponentialRK v1.3.0
  [becaefa8] + OrdinaryDiffEqExtrapolation v1.4.0
  [5960d6e9] + OrdinaryDiffEqFIRK v1.7.0
  [101fe9f7] + OrdinaryDiffEqFeagin v1.1.0
  [d3585ca7] + OrdinaryDiffEqFunctionMap v1.1.1
  [d28bc4f8] + OrdinaryDiffEqHighOrderRK v1.1.0
  [9f002381] + OrdinaryDiffEqIMEXMultistep v1.2.0
  [521117fe] + OrdinaryDiffEqLinear v1.1.0
  [1344f307] + OrdinaryDiffEqLowOrderRK v1.2.0
  [b0944070] + OrdinaryDiffEqLowStorageRK v1.2.1
  [127b3ac7] + OrdinaryDiffEqNonlinearSolve v1.5.0
  [c9986a66] + OrdinaryDiffEqNordsieck v1.1.0
  [5dd0a6cf] + OrdinaryDiffEqPDIRK v1.2.0
  [5b33eab2] + OrdinaryDiffEqPRK v1.1.0
  [04162be5] + OrdinaryDiffEqQPRK v1.1.0
  [af6ede74] + OrdinaryDiffEqRKN v1.1.0
  [43230ef6] + OrdinaryDiffEqRosenbrock v1.6.0
  [2d112036] + OrdinaryDiffEqSDIRK v1.2.0
  [669c94d9] + OrdinaryDiffEqSSPRK v1.2.0
  [e3e12d00] + OrdinaryDiffEqStabilizedIRK v1.2.0
  [358294b1] + OrdinaryDiffEqStabilizedRK v1.1.0
  [fa646aed] + OrdinaryDiffEqSymplecticRK v1.3.0
  [b1df2697] + OrdinaryDiffEqTsit5 v1.1.0
  [79d7bb75] + OrdinaryDiffEqVerner v1.1.1
  [90014a1f] + PDMats v0.11.32
  [65ce6f38] + PackageExtensionCompat v1.0.2
  [d96e819e] + Parameters v0.12.3
  [69de0a69] + Parsers v2.8.1
  [f517fe37] + Polyester v0.7.16
  [1d0040c9] + PolyesterWeave v0.2.2
  [2dfb63ee] + PooledArrays v1.4.3
  [d236fae5] + PreallocationTools v0.4.25
  [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [08abe8d2] + PrettyTables v2.4.0
  [92933f4c] + ProgressMeter v1.10.2
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
  [94ee1d12] + Quaternions v0.7.6
⌅ [30b38841] + QuickHeaps v0.1.2
  [c1ae055f] + RealDot v0.1.0
  [3cdcf5f2] + RecipesBase v1.3.4
  [731186ca] + RecursiveArrayTools v3.31.0
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.0
  [708f8203] + Richardson v1.4.2
  [79098fc4] + Rmath v0.8.0
  [6038ab10] + Rotations v1.7.1
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  [94e857df] + SIMDTypes v0.1.0
  [0bca4576] + SciMLBase v2.75.1
  [19f34311] + SciMLJacobianOperators v0.1.1
  [c0aeaf25] + SciMLOperators v0.3.12
  [53ae85a6] + SciMLStructures v1.6.1
  [6c6a2e73] + Scratch v1.2.1
  [91c51154] + SentinelArrays v1.4.8
  [efcf1570] + Setfield v1.1.2
  [777ac1f9] + SimpleBufferStream v1.2.0
  [727e6d20] + SimpleNonlinearSolve v2.1.0
  [699a6c99] + SimpleTraits v0.9.4
  [ce78b400] + SimpleUnPack v1.1.0
  [47aef6b3] + SimpleWeightedGraphs v1.4.0
  [a2af1166] + SortingAlgorithms v1.2.1
  [47a9eef4] + SparseDiffTools v2.23.1
  [0a514795] + SparseMatrixColorings v0.4.13
  [d4ead438] + SpatialIndexing v0.1.6
  [276daf66] + SpecialFunctions v2.5.0
  [aedffcd0] + Static v1.1.1
  [0d7ed370] + StaticArrayInterface v1.8.0
  [90137ffa] + StaticArrays v1.9.12
  [1e83bf80] + StaticArraysCore v1.4.3
  [4c8beaf5] + StaticGraphs v0.3.0
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.0
  [2913bbd2] + StatsBase v0.34.4
  [4c63d2b9] + StatsFuns v1.3.2
  [7792a7ef] + StrideArraysCore v0.5.7
  [892a3eda] + StringManipulation v0.4.1
  [2efcf032] + SymbolicIndexingInterface v0.3.38
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.0
⌅ [1c621080] + TestItems v0.1.1
  [8290d209] + ThreadingUtilities v0.5.2
  [a759f4b9] + TimerOutputs v0.5.27
  [3bb67fe8] + TranscodingStreams v0.11.3
  [781d530d] + TruncatedStacktraces v1.4.0
  [5c2747f8] + URIs v1.5.1
  [3a884ed6] + UnPack v1.0.2
  [19fa3120] + VertexSafeGraphs v0.2.0
  [ea10d353] + WeakRefStrings v1.4.2
  [76eceee3] + WorkerUtilities v1.6.1
  [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [856f044c] + MKL_jll v2025.0.1+1
  [c8ffd9c3] + MbedTLS_jll v2.28.6+1
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [02c8fc9c] + XML2_jll v2.13.6+1
  [1317d2d5] + oneTBB_jll v2022.0.0+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.12.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.12.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
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  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.12.0
  [f489334b] + StyledStrings v1.11.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.11.1+1
  [e37daf67] + LibGit2_jll v1.9.0+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2024.12.31
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.5+0
  [458c3c95] + OpenSSL_jll v3.0.16+0
  [bea87d4a] + SuiteSparse_jll v7.8.3+2
  [83775a58] + Zlib_jll v1.3.1+2
  [8e850b90] + libblastrampoline_jll v5.12.0+0
  [8e850ede] + nghttp2_jll v1.64.0+1
  [3f19e933] + p7zip_jll v17.5.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 19.12s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...
Precompiling packages...
   6304.7 ms  ✓ TestEnv
  1 dependency successfully precompiled in 8 seconds. 25 already precompiled.

Precompiling package dependencies...
ERROR: LoadError: The following 2 direct dependencies failed to precompile:

Bactos 

Failed to precompile Bactos [d33a0dba-7a8b-4e4b-94ae-537a05778f3e] to "/home/pkgeval/.julia/compiled/v1.12/Bactos/jl_L3WonP".
Update message: Agents v5.15
Welcome to this new update of Agents.jl!

Noteworthy changes:

- Agents.jl moved to Julia 1.9+, and now exports visualization
  and interactive applications automatically once Makie (or Makie backends
  such as GLMakie) come into scope, using the new package extension system.
  The only downside of this is that now to visualize ABMs on open street
  maps, the package OSMMakie.jl must be explicitly loaded as well.
  InteractiveDynamics.jl is now obsolete.
- Several performance improvements all across the board.
- DEI-motivated name change for all names that remove agents:
    - `genocide! -> remove_all!`
    - `kill_agent! -> remove_agent!`
    - `UnkillableABM -> UnremovableABM`
- We have created an objective fully automated framework for comparing open source
  agent based modelling software. It shows that Agents.jl is much faster
  than competing alternatives (MASON, NetLogo, Mesa).

See the online documentation for more!
ERROR: LoadError: cannot declare CellListMap.copy_output exported; it is already declared public
Stacktrace:
  [1] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:308
  [2] top-level scope
    @ ~/.julia/packages/CellListMap/6MkUi/src/CellListMap.jl:49
  [3] include(mod::Module, _path::String)
    @ Base ./Base.jl:307
  [4] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
    @ Base ./loading.jl:3004
  [5] top-level scope
    @ stdin:6
  [6] eval(m::Module, e::Any)
    @ Core ./boot.jl:488
  [7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2855
  [8] include_string
    @ ./loading.jl:2865 [inlined]
  [9] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:326
 [10] _start()
    @ Base ./client.jl:560
in expression starting at /home/pkgeval/.julia/packages/CellListMap/6MkUi/src/ParticleSystem.jl:5
in expression starting at /home/pkgeval/.julia/packages/CellListMap/6MkUi/src/CellListMap.jl:1
in expression starting at stdin:6
ERROR: LoadError: Failed to precompile CellListMap [69e1c6dd-3888-40e6-b3c8-31ac5f578864] to "/home/pkgeval/.julia/compiled/v1.12/CellListMap/jl_4fG76J".
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base ./loading.jl:3291
  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()
    @ Base ./loading.jl:2682
  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93
  [5] #mkpidlock#7
    @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114
  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})
    @ Base ./reflection.jl:1280
  [8] #invokelatest_gr#227
    @ ./reflection.jl:1288 [inlined]
  [9] invokelatest_gr
    @ ./reflection.jl:1282 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:3862
 [11] maybe_cachefile_lock
    @ ./loading.jl:3859 [inlined]
 [12] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2668
 [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2493
 [14] macro expansion
    @ ./loading.jl:2421 [inlined]
 [15] macro expansion
    @ ./lock.jl:376 [inlined]
 [16] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2386
 [17] #invoke_in_world#2
    @ ./essentials.jl:1092 [inlined]
 [18] invoke_in_world
    @ ./essentials.jl:1088 [inlined]
 [19] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2366
 [20] top-level scope
    @ ~/.julia/packages/Bactos/tHnWL/src/Bactos.jl:4
 [21] include(mod::Module, _path::String)
    @ Base ./Base.jl:307
 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3004
 [23] top-level scope
    @ stdin:6
 [24] eval(m::Module, e::Any)
    @ Core ./boot.jl:488
 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2855
 [26] include_string
    @ ./loading.jl:2865 [inlined]
 [27] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:326
 [28] _start()
    @ Base ./client.jl:560
in expression starting at /home/pkgeval/.julia/packages/Bactos/tHnWL/src/Bactos.jl:1
in expression starting at stdin:6
CellListMap 

Failed to precompile CellListMap [69e1c6dd-3888-40e6-b3c8-31ac5f578864] to "/home/pkgeval/.julia/compiled/v1.12/CellListMap/jl_esVMcr".
ERROR: LoadError: cannot declare CellListMap.copy_output exported; it is already declared public
Stacktrace:
  [1] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:308
  [2] top-level scope
    @ ~/.julia/packages/CellListMap/6MkUi/src/CellListMap.jl:49
  [3] include(mod::Module, _path::String)
    @ Base ./Base.jl:307
  [4] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3004
  [5] top-level scope
    @ stdin:6
  [6] eval(m::Module, e::Any)
    @ Core ./boot.jl:488
  [7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2855
  [8] include_string
    @ ./loading.jl:2865 [inlined]
  [9] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:326
 [10] _start()
    @ Base ./client.jl:560
in expression starting at /home/pkgeval/.julia/packages/CellListMap/6MkUi/src/ParticleSystem.jl:5
in expression starting at /home/pkgeval/.julia/packages/CellListMap/6MkUi/src/CellListMap.jl:1
in expression starting at stdin:6
in expression starting at /PkgEval.jl/scripts/precompile.jl:37

Precompilation failed after 1768.91s



################################################################################
# Testing
#

     Testing Bactos
      Status `/tmp/jl_nqE42W/Project.toml`
⌅ [46ada45e] Agents v5.17.2
  [d33a0dba] Bactos v0.0.1
⌅ [69e1c6dd] CellListMap v0.8.32
  [31c24e10] Distributions v0.25.117
  [26cc04aa] FiniteDifferences v0.12.32
  [1dea7af3] OrdinaryDiffEq v6.91.0
  [6038ab10] Rotations v1.7.1
  [90137ffa] StaticArrays v1.9.12
  [37e2e46d] LinearAlgebra v1.12.0
  [9a3f8284] Random v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_nqE42W/Manifest.toml`
  [47edcb42] ADTypes v1.13.0
  [7d9f7c33] Accessors v0.1.42
  [79e6a3ab] Adapt v4.2.0
⌅ [46ada45e] Agents v5.17.2
  [66dad0bd] AliasTables v1.1.3
  [ec485272] ArnoldiMethod v0.4.0
  [4fba245c] ArrayInterface v7.18.0
  [4c555306] ArrayLayouts v1.11.1
⌅ [1dc0ca97] ArrayTools v0.2.7
  [d33a0dba] Bactos v0.0.1
  [d1d4a3ce] BitFlags v0.1.9
  [62783981] BitTwiddlingConvenienceFunctions v0.1.6
  [70df07ce] BracketingNonlinearSolve v1.1.0
  [2a0fbf3d] CPUSummary v0.2.6
  [336ed68f] CSV v0.10.15
⌅ [69e1c6dd] CellListMap v0.8.32
  [d360d2e6] ChainRulesCore v1.25.1
  [fb6a15b2] CloseOpenIntervals v0.1.13
  [944b1d66] CodecZlib v0.7.8
  [38540f10] CommonSolve v0.2.4
  [bbf7d656] CommonSubexpressions v0.3.1
  [f70d9fcc] CommonWorldInvalidations v1.0.0
  [34da2185] Compat v4.16.0
  [a33af91c] CompositionsBase v0.1.2
  [2569d6c7] ConcreteStructs v0.2.3
  [f0e56b4a] ConcurrentUtilities v2.5.0
  [187b0558] ConstructionBase v1.5.8
  [adafc99b] CpuId v0.3.1
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
  [a93c6f00] DataFrames v1.7.0
  [864edb3b] DataStructures v0.18.20
  [e2d170a0] DataValueInterfaces v1.0.0
  [2b5f629d] DiffEqBase v6.164.1
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [a0c0ee7d] DifferentiationInterface v0.6.42
  [b4f34e82] Distances v0.10.12
  [31c24e10] Distributions v0.25.117
  [ffbed154] DocStringExtensions v0.9.3
  [4e289a0a] EnumX v1.0.4
  [f151be2c] EnzymeCore v0.8.8
  [460bff9d] ExceptionUnwrapping v0.1.11
  [d4d017d3] ExponentialUtilities v1.27.0
  [e2ba6199] ExprTools v0.1.10
  [55351af7] ExproniconLite v0.10.14
  [7034ab61] FastBroadcast v0.3.5
  [9aa1b823] FastClosures v0.3.2
  [442a2c76] FastGaussQuadrature v1.0.2
  [a4df4552] FastPower v1.1.1
  [5789e2e9] FileIO v1.16.6
  [48062228] FilePathsBase v0.9.23
  [1a297f60] FillArrays v1.13.0
  [6a86dc24] FiniteDiff v2.27.0
  [26cc04aa] FiniteDifferences v0.12.32
  [f6369f11] ForwardDiff v0.10.38
  [069b7b12] FunctionWrappers v1.1.3
  [77dc65aa] FunctionWrappersWrappers v0.1.3
  [46192b85] GPUArraysCore v0.2.0
  [c145ed77] GenericSchur v0.5.4
  [86223c79] Graphs v1.12.0
  [cd3eb016] HTTP v1.10.15
  [34004b35] HypergeometricFunctions v0.3.27
  [615f187c] IfElse v0.1.1
  [d25df0c9] Inflate v0.1.5
  [842dd82b] InlineStrings v1.4.3
  [3587e190] InverseFunctions v0.1.17
  [41ab1584] InvertedIndices v1.3.1
  [92d709cd] IrrationalConstants v0.2.4
  [82899510] IteratorInterfaceExtensions v1.0.0
⌅ [033835bb] JLD2 v0.4.54
  [692b3bcd] JLLWrappers v1.7.0
  [682c06a0] JSON v0.21.4
  [ae98c720] Jieko v0.2.1
  [ba0b0d4f] Krylov v0.9.10
  [b964fa9f] LaTeXStrings v1.4.0
  [10f19ff3] LayoutPointers v0.1.17
  [5078a376] LazyArrays v2.6.0
⌅ [d1922b25] LightOSM v0.2.11
  [9c8b4983] LightXML v0.9.1
  [87fe0de2] LineSearch v0.1.4
  [d3d80556] LineSearches v7.3.0
  [7ed4a6bd] LinearSolve v3.3.1
  [2ab3a3ac] LogExpFunctions v0.3.29
  [e6f89c97] LoggingExtras v1.1.0
  [1914dd2f] MacroTools v0.5.15
  [d125e4d3] ManualMemory v0.1.8
  [bb5d69b7] MaybeInplace v0.1.4
  [739be429] MbedTLS v1.1.9
⌅ [626554b9] MetaGraphs v0.7.2
  [e1d29d7a] Missings v1.2.0
  [2e0e35c7] Moshi v0.3.5
  [46d2c3a1] MuladdMacro v0.2.4
  [d41bc354] NLSolversBase v7.8.3
  [77ba4419] NaNMath v1.1.2
  [b8a86587] NearestNeighbors v0.4.21
  [8913a72c] NonlinearSolve v4.4.0
  [be0214bd] NonlinearSolveBase v1.5.0
  [5959db7a] NonlinearSolveFirstOrder v1.3.0
  [9a2c21bd] NonlinearSolveQuasiNewton v1.2.0
  [26075421] NonlinearSolveSpectralMethods v1.1.0
  [4d8831e6] OpenSSL v1.4.3
  [bac558e1] OrderedCollections v1.8.0
  [1dea7af3] OrdinaryDiffEq v6.91.0
  [89bda076] OrdinaryDiffEqAdamsBashforthMoulton v1.2.0
  [6ad6398a] OrdinaryDiffEqBDF v1.2.0
  [bbf590c4] OrdinaryDiffEqCore v1.18.1
  [50262376] OrdinaryDiffEqDefault v1.3.0
  [4302a76b] OrdinaryDiffEqDifferentiation v1.4.0
  [9286f039] OrdinaryDiffEqExplicitRK v1.1.0
  [e0540318] OrdinaryDiffEqExponentialRK v1.3.0
  [becaefa8] OrdinaryDiffEqExtrapolation v1.4.0
  [5960d6e9] OrdinaryDiffEqFIRK v1.7.0
  [101fe9f7] OrdinaryDiffEqFeagin v1.1.0
  [d3585ca7] OrdinaryDiffEqFunctionMap v1.1.1
  [d28bc4f8] OrdinaryDiffEqHighOrderRK v1.1.0
  [9f002381] OrdinaryDiffEqIMEXMultistep v1.2.0
  [521117fe] OrdinaryDiffEqLinear v1.1.0
  [1344f307] OrdinaryDiffEqLowOrderRK v1.2.0
  [b0944070] OrdinaryDiffEqLowStorageRK v1.2.1
  [127b3ac7] OrdinaryDiffEqNonlinearSolve v1.5.0
  [c9986a66] OrdinaryDiffEqNordsieck v1.1.0
  [5dd0a6cf] OrdinaryDiffEqPDIRK v1.2.0
  [5b33eab2] OrdinaryDiffEqPRK v1.1.0
  [04162be5] OrdinaryDiffEqQPRK v1.1.0
  [af6ede74] OrdinaryDiffEqRKN v1.1.0
  [43230ef6] OrdinaryDiffEqRosenbrock v1.6.0
  [2d112036] OrdinaryDiffEqSDIRK v1.2.0
  [669c94d9] OrdinaryDiffEqSSPRK v1.2.0
  [e3e12d00] OrdinaryDiffEqStabilizedIRK v1.2.0
  [358294b1] OrdinaryDiffEqStabilizedRK v1.1.0
  [fa646aed] OrdinaryDiffEqSymplecticRK v1.3.0
  [b1df2697] OrdinaryDiffEqTsit5 v1.1.0
  [79d7bb75] OrdinaryDiffEqVerner v1.1.1
  [90014a1f] PDMats v0.11.32
  [65ce6f38] PackageExtensionCompat v1.0.2
  [d96e819e] Parameters v0.12.3
  [69de0a69] Parsers v2.8.1
  [f517fe37] Polyester v0.7.16
  [1d0040c9] PolyesterWeave v0.2.2
  [2dfb63ee] PooledArrays v1.4.3
  [d236fae5] PreallocationTools v0.4.25
  [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [08abe8d2] PrettyTables v2.4.0
  [92933f4c] ProgressMeter v1.10.2
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
  [94ee1d12] Quaternions v0.7.6
⌅ [30b38841] QuickHeaps v0.1.2
  [c1ae055f] RealDot v0.1.0
  [3cdcf5f2] RecipesBase v1.3.4
  [731186ca] RecursiveArrayTools v3.31.0
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.0
  [708f8203] Richardson v1.4.2
  [79098fc4] Rmath v0.8.0
  [6038ab10] Rotations v1.7.1
  [7e49a35a] RuntimeGeneratedFunctions v0.5.13
  [94e857df] SIMDTypes v0.1.0
  [0bca4576] SciMLBase v2.75.1
  [19f34311] SciMLJacobianOperators v0.1.1
  [c0aeaf25] SciMLOperators v0.3.12
  [53ae85a6] SciMLStructures v1.6.1
  [6c6a2e73] Scratch v1.2.1
  [91c51154] SentinelArrays v1.4.8
  [efcf1570] Setfield v1.1.2
  [777ac1f9] SimpleBufferStream v1.2.0
  [727e6d20] SimpleNonlinearSolve v2.1.0
  [699a6c99] SimpleTraits v0.9.4
  [ce78b400] SimpleUnPack v1.1.0
  [47aef6b3] SimpleWeightedGraphs v1.4.0
  [a2af1166] SortingAlgorithms v1.2.1
  [47a9eef4] SparseDiffTools v2.23.1
  [0a514795] SparseMatrixColorings v0.4.13
  [d4ead438] SpatialIndexing v0.1.6
  [276daf66] SpecialFunctions v2.5.0
  [aedffcd0] Static v1.1.1
  [0d7ed370] StaticArrayInterface v1.8.0
  [90137ffa] StaticArrays v1.9.12
  [1e83bf80] StaticArraysCore v1.4.3
  [4c8beaf5] StaticGraphs v0.3.0
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.7.0
  [2913bbd2] StatsBase v0.34.4
  [4c63d2b9] StatsFuns v1.3.2
  [7792a7ef] StrideArraysCore v0.5.7
  [892a3eda] StringManipulation v0.4.1
  [2efcf032] SymbolicIndexingInterface v0.3.38
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.0
⌅ [1c621080] TestItems v0.1.1
  [8290d209] ThreadingUtilities v0.5.2
  [a759f4b9] TimerOutputs v0.5.27
  [3bb67fe8] TranscodingStreams v0.11.3
  [781d530d] TruncatedStacktraces v1.4.0
  [5c2747f8] URIs v1.5.1
  [3a884ed6] UnPack v1.0.2
  [19fa3120] VertexSafeGraphs v0.2.0
  [ea10d353] WeakRefStrings v1.4.2
  [76eceee3] WorkerUtilities v1.6.1
  [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0
  [94ce4f54] Libiconv_jll v1.18.0+0
  [856f044c] MKL_jll v2025.0.1+1
  [c8ffd9c3] MbedTLS_jll v2.28.6+1
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
  [02c8fc9c] XML2_jll v2.13.6+1
  [1317d2d5] oneTBB_jll v2022.0.0+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.12.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.12.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [1a1011a3] SharedArrays v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.12.0
  [f489334b] StyledStrings v1.11.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.11.1+1
  [e37daf67] LibGit2_jll v1.9.0+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2024.12.31
  [4536629a] OpenBLAS_jll v0.3.29+0
  [05823500] OpenLibm_jll v0.8.5+0
  [458c3c95] OpenSSL_jll v3.0.16+0
  [bea87d4a] SuiteSparse_jll v7.8.3+2
  [83775a58] Zlib_jll v1.3.1+2
  [8e850b90] libblastrampoline_jll v5.12.0+0
  [8e850ede] nghttp2_jll v1.64.0+1
  [3f19e933] p7zip_jll v17.5.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
Precompiling packages...
           ✗ CellListMap
Info Given Bactos was explicitly requested, output will be shown live 
ERROR: LoadError: cannot declare CellListMap.copy_output exported; it is already declared public
Stacktrace:
  [1] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:308
  [2] top-level scope
    @ ~/.julia/packages/CellListMap/6MkUi/src/CellListMap.jl:49
  [3] include(mod::Module, _path::String)
    @ Base ./Base.jl:307
  [4] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
    @ Base ./loading.jl:3004
  [5] top-level scope
    @ stdin:6
  [6] eval(m::Module, e::Any)
    @ Core ./boot.jl:488
  [7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2855
  [8] include_string
    @ ./loading.jl:2865 [inlined]
  [9] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:326
 [10] _start()
    @ Base ./client.jl:560
in expression starting at /home/pkgeval/.julia/packages/CellListMap/6MkUi/src/ParticleSystem.jl:5
in expression starting at /home/pkgeval/.julia/packages/CellListMap/6MkUi/src/CellListMap.jl:1
in expression starting at stdin:6
ERROR: LoadError: Failed to precompile CellListMap [69e1c6dd-3888-40e6-b3c8-31ac5f578864] to "/home/pkgeval/.julia/compiled/v1.12/CellListMap/jl_cb2YUE".
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base ./loading.jl:3291
  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()
    @ Base ./loading.jl:2682
  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93
  [5] #mkpidlock#7
    @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114
  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})
    @ Base ./reflection.jl:1280
  [8] #invokelatest_gr#227
    @ ./reflection.jl:1288 [inlined]
  [9] invokelatest_gr
    @ ./reflection.jl:1282 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:3862
 [11] maybe_cachefile_lock
    @ ./loading.jl:3859 [inlined]
 [12] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2668
 [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2493
 [14] macro expansion
    @ ./loading.jl:2421 [inlined]
 [15] macro expansion
    @ ./lock.jl:376 [inlined]
 [16] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2386
 [17] #invoke_in_world#2
    @ ./essentials.jl:1092 [inlined]
 [18] invoke_in_world
    @ ./essentials.jl:1088 [inlined]
 [19] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2366
 [20] top-level scope
    @ ~/.julia/packages/Bactos/tHnWL/src/Bactos.jl:4
 [21] include(mod::Module, _path::String)
    @ Base ./Base.jl:307
 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3004
 [23] top-level scope
    @ stdin:6
 [24] eval(m::Module, e::Any)
    @ Core ./boot.jl:488
 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2855
 [26] include_string
    @ ./loading.jl:2865 [inlined]
 [27] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:326
 [28] _start()
    @ Base ./client.jl:560
in expression starting at /home/pkgeval/.julia/packages/Bactos/tHnWL/src/Bactos.jl:1
in expression starting at stdin:6
           ✗ Bactos
  0 dependencies successfully precompiled in 38 seconds. 327 already precompiled.

ERROR: LoadError: The following 2 direct dependencies failed to precompile:

Bactos 

Failed to precompile Bactos [d33a0dba-7a8b-4e4b-94ae-537a05778f3e] to "/home/pkgeval/.julia/compiled/v1.12/Bactos/jl_WXKzKg".
ERROR: LoadError: cannot declare CellListMap.copy_output exported; it is already declared public
Stacktrace:
  [1] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:308
  [2] top-level scope
    @ ~/.julia/packages/CellListMap/6MkUi/src/CellListMap.jl:49
  [3] include(mod::Module, _path::String)
    @ Base ./Base.jl:307
  [4] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
    @ Base ./loading.jl:3004
  [5] top-level scope
    @ stdin:6
  [6] eval(m::Module, e::Any)
    @ Core ./boot.jl:488
  [7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2855
  [8] include_string
    @ ./loading.jl:2865 [inlined]
  [9] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:326
 [10] _start()
    @ Base ./client.jl:560
in expression starting at /home/pkgeval/.julia/packages/CellListMap/6MkUi/src/ParticleSystem.jl:5
in expression starting at /home/pkgeval/.julia/packages/CellListMap/6MkUi/src/CellListMap.jl:1
in expression starting at stdin:6
ERROR: LoadError: Failed to precompile CellListMap [69e1c6dd-3888-40e6-b3c8-31ac5f578864] to "/home/pkgeval/.julia/compiled/v1.12/CellListMap/jl_cb2YUE".
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base ./loading.jl:3291
  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()
    @ Base ./loading.jl:2682
  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93
  [5] #mkpidlock#7
    @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114
  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})
    @ Base ./reflection.jl:1280
  [8] #invokelatest_gr#227
    @ ./reflection.jl:1288 [inlined]
  [9] invokelatest_gr
    @ ./reflection.jl:1282 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:3862
 [11] maybe_cachefile_lock
    @ ./loading.jl:3859 [inlined]
 [12] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2668
 [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2493
 [14] macro expansion
    @ ./loading.jl:2421 [inlined]
 [15] macro expansion
    @ ./lock.jl:376 [inlined]
 [16] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2386
 [17] #invoke_in_world#2
    @ ./essentials.jl:1092 [inlined]
 [18] invoke_in_world
    @ ./essentials.jl:1088 [inlined]
 [19] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2366
 [20] top-level scope
    @ ~/.julia/packages/Bactos/tHnWL/src/Bactos.jl:4
 [21] include(mod::Module, _path::String)
    @ Base ./Base.jl:307
 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3004
 [23] top-level scope
    @ stdin:6
 [24] eval(m::Module, e::Any)
    @ Core ./boot.jl:488
 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2855
 [26] include_string
    @ ./loading.jl:2865 [inlined]
 [27] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:326
 [28] _start()
    @ Base ./client.jl:560
in expression starting at /home/pkgeval/.julia/packages/Bactos/tHnWL/src/Bactos.jl:1
in expression starting at stdin:6
CellListMap 

Failed to precompile CellListMap [69e1c6dd-3888-40e6-b3c8-31ac5f578864] to "/home/pkgeval/.julia/compiled/v1.12/CellListMap/jl_hl6AL7".
ERROR: LoadError: cannot declare CellListMap.copy_output exported; it is already declared public
Stacktrace:
  [1] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:308
  [2] top-level scope
    @ ~/.julia/packages/CellListMap/6MkUi/src/CellListMap.jl:49
  [3] include(mod::Module, _path::String)
    @ Base ./Base.jl:307
  [4] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3004
  [5] top-level scope
    @ stdin:6
  [6] eval(m::Module, e::Any)
    @ Core ./boot.jl:488
  [7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2855
  [8] include_string
    @ ./loading.jl:2865 [inlined]
  [9] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:326
 [10] _start()
    @ Base ./client.jl:560
in expression starting at /home/pkgeval/.julia/packages/CellListMap/6MkUi/src/ParticleSystem.jl:5
in expression starting at /home/pkgeval/.julia/packages/CellListMap/6MkUi/src/CellListMap.jl:1
in expression starting at stdin:6
in expression starting at /home/pkgeval/.julia/packages/Bactos/tHnWL/test/runtests.jl:1

Testing failed after 47.25s

ERROR: LoadError: Package Bactos errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2365
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2220 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:486
  [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:164
  [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152
  [7] test
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined]
  [8] #test#81
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined]
  [9] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [10] include(mod::Module, _path::String)
    @ Base ./Base.jl:307
 [11] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:328
 [12] _start()
    @ Base ./client.jl:560
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 1987.77s: package fails to precompile