Package evaluation to load sparseQFCA on Julia 1.13.0-DEV.1324 (c1d413cf8a*) started at 2025-10-17T22:29:05.530


################################################################################
# Set-up
#


Set-up completed after 0.12s


################################################################################
# Installation
#

Installing sparseQFCA...
   Resolving package versions...
   Installed Pardiso ─ v0.5.7
    Updating `~/.julia/environments/v1.13/Project.toml`
  [077cf62c] + sparseQFCA v2.3.0
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [14f7f29c] + AMD v0.5.3
  [5a4f3dfa] + AbstractFBCModels v1.3.0
  [6e4b80f9] + BenchmarkTools v1.6.2
  [3391f64e] + CDDLib v0.10.1
  [fa961155] + CEnum v0.5.0
  [babc4406] + COBREXA v2.9.1
  [9961bab8] + Cbc v1.3.0
⌅ [61c947e1] + Clarabel v0.10.0
  [e2554f3b] + Clp v1.3.0
  [523fee87] + CodecBzip2 v0.8.5
  [944b1d66] + CodecZlib v0.7.8
  [3da002f7] + ColorTypes v0.12.1
  [5ae59095] + Colors v0.13.1
  [bbf7d656] + CommonSubexpressions v0.3.1
  [34da2185] + Compat v4.18.1
  [5515826b] + ConstraintTrees v1.11.0
  [187b0558] + ConstructionBase v1.6.0
⌅ [864edb3b] + DataStructures v0.18.22
  [8bb1440f] + DelimitedFiles v1.9.1
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.15.1
  [ffbed154] + DocStringExtensions v0.9.5
  [e2685f51] + ECOS v1.1.3
  [e2ba6199] + ExprTools v0.1.10
  [5789e2e9] + FileIO v1.17.1
  [53c48c17] + FixedPointNumbers v0.8.5
  [f6369f11] + ForwardDiff v1.2.2
  [60bf3e95] + GLPK v1.2.1
  [14197337] + GenericLinearAlgebra v0.3.18
  [f67ccb44] + HDF5 v0.17.2
⌅ [34c5aeac] + HSL v0.4.3
  [076d061b] + HashArrayMappedTries v0.2.0
  [87dc4568] + HiGHS v1.19.3
  [615f187c] + IfElse v0.1.1
  [92d709cd] + IrrationalConstants v0.2.6
⌅ [033835bb] + JLD2 v0.5.15
  [692b3bcd] + JLLWrappers v1.7.1
⌅ [682c06a0] + JSON v0.21.4
  [0f8b85d8] + JSON3 v1.14.3
  [475c1105] + JSONFBCModels v1.0.1
  [4076af6c] + JuMP v1.29.1
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [3da0fdf6] + MPIPreferences v0.1.11
  [1914dd2f] + MacroTools v0.5.16
  [8c4f8055] + MathOptIIS v0.1.1
  [b8f27783] + MathOptInterface v1.45.0
  [d8a4904e] + MutableArithmetics v1.6.6
  [77ba4419] + NaNMath v1.1.3
  [bac558e1] + OrderedCollections v1.8.1
⌅ [46dd5b70] + Pardiso v0.5.7
  [69de0a69] + Parsers v2.8.3
  [3bbf5609] + PikaParser v0.6.1
  [67491407] + Polyhedra v0.8.1
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.0
  [bfc457fd] + QDLDL v0.4.1
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [e5567a89] + SBML v1.6.0
  [3e8f9d1a] + SBMLFBCModels v1.1.1
  [c946c3f1] + SCS v2.3.0
  [7e506255] + ScopedValues v1.5.0
  [66db9d55] + SnoopPrecompile v1.0.3
  [276daf66] + SpecialFunctions v2.6.1
  [860ef19b] + StableRNGs v1.0.3
  [90137ffa] + StaticArrays v1.9.15
  [1e83bf80] + StaticArraysCore v1.4.3
  [10745b16] + Statistics v1.11.1
  [856f2bd8] + StructTypes v1.11.0
  [a759f4b9] + TimerOutputs v0.5.29
  [3bb67fe8] + TranscodingStreams v0.11.3
  [1986cc42] + Unitful v1.25.0
  [077cf62c] + sparseQFCA v2.3.0
  [ae81ac8f] + ASL_jll v0.1.3+0
  [6e34b625] + Bzip2_jll v1.0.9+0
  [38041ee0] + Cbc_jll v200.1000.1200+0
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  [06985876] + Clp_jll v100.1700.1000+1
  [be027038] + CoinUtils_jll v200.1100.1200+0
  [c2c64177] + ECOS_jll v200.0.800+0
  [e8aa6df9] + GLPK_jll v5.0.1+1
  [0234f1f7] + HDF5_jll v1.14.6+0
  [017b0a0e] + HSL_jll v4.0.4+0
  [8fd58aa0] + HiGHS_jll v1.11.0+1
  [e33a78d0] + Hwloc_jll v2.12.2+0
⌅ [1d5cc7b8] + IntelOpenMP_jll v2024.2.1+0
  [1d63c593] + LLVMOpenMP_jll v18.1.8+0
  [94ce4f54] + Libiconv_jll v1.18.0+0
⌅ [d00139f3] + METIS_jll v5.1.2+1
⌅ [856f044c] + MKL_jll v2024.2.0+0
  [7cb0a576] + MPICH_jll v4.3.1+0
  [f1f71cc9] + MPItrampoline_jll v5.5.4+0
  [d7ed1dd3] + MUMPS_seq_jll v500.800.100+0
  [9237b28f] + MicrosoftMPI_jll v10.1.4+3
  [656ef2d0] + OpenBLAS32_jll v0.3.29+0
  [fe0851c0] + OpenMPI_jll v5.0.8+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [7da25872] + Osi_jll v0.10800.1100+0
  [bb12108a] + SBML_jll v5.20.1+0
  [f4f2fc5b] + SCS_jll v3.2.9+0
⌅ [02c8fc9c] + XML2_jll v2.13.9+0
  [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0
⌅ [f07e07eb] + cddlib_jll v0.94.14+0
  [477f73a3] + libaec_jll v1.1.4+0
  [1317d2d5] + oneTBB_jll v2022.0.0+1
  [0dad84c5] + ArgTools v1.1.2
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  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
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  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.13.0
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  [9abbd945] + Profile v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [1a1011a3] + SharedArrays v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.11.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [781609d7] + GMP_jll v6.3.0+2
  [deac9b47] + LibCURL_jll v8.16.0+0
  [e37daf67] + LibGit2_jll v1.9.1+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.9.9
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [458c3c95] + OpenSSL_jll v3.5.4+0
  [efcefdf7] + PCRE2_jll v10.46.0+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.1+2
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.15.0+0
  [8e850ede] + nghttp2_jll v1.67.1+0
  [3f19e933] + p7zip_jll v17.6.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`
    Building Pardiso → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/4b618484bf94a52f02595cd73ac8a6417f4c0c70/build.log`

Installation completed after 16.13s


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# Precompilation
#

Precompiling PkgEval dependencies...
     Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml`
    Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml`

Precompiling package dependencies...
Precompiling packages...


Precompilation completed after 19.59s


################################################################################
# Loading
#

Loading sparseQFCA...
ERROR: LoadError: ParseError:
# Error @ /home/pkgeval/.julia/packages/Unitful/HCJFR/src/logarithm.jl:127:5

Base. *(::MixedUnits, ::MixedUnits) =
#   └───────────────────────────────┘ ── extra tokens after end of expression
Stacktrace:
   [1] top-level scope
     @ ~/.julia/packages/Unitful/HCJFR/src/logarithm.jl:127
   [2] include(mapexpr::Function, mod::Module, _path::String)
     @ Base ./Base.jl:310
   [3] top-level scope
     @ ~/.julia/packages/Unitful/HCJFR/src/Unitful.jl:67
   [4] include(mod::Module, _path::String)
     @ Base ./Base.jl:309
   [5] __require_prelocked(pkg::Base.PkgId, env::String)
     @ Base ./loading.jl:2777
   [6] _require_prelocked(uuidkey::Base.PkgId, env::String)
     @ Base ./loading.jl:2536
   [7] macro expansion
     @ ./loading.jl:2464 [inlined]
   [8] macro expansion
     @ ./lock.jl:376 [inlined]
   [9] __require(into::Module, mod::Symbol)
     @ Base ./loading.jl:2428
  [10] require
     @ ./loading.jl:2404 [inlined]
  [11] eval_import_path
     @ ./module.jl:36 [inlined]
  [12] eval_import_path_all(at::Module, path::Expr, keyword::String)
     @ Base ./module.jl:60
  [13] _eval_using(to::Module, path::Expr)
     @ Base ./module.jl:137
  [14] top-level scope
     @ ~/.julia/packages/SBML/mJIpc/src/SBML.jl:11
  [15] include(mod::Module, _path::String)
     @ Base ./Base.jl:309
  [16] __require_prelocked(pkg::Base.PkgId, env::String)
     @ Base ./loading.jl:2777
  [17] _require_prelocked(uuidkey::Base.PkgId, env::String)
     @ Base ./loading.jl:2536
  [18] macro expansion
     @ ./loading.jl:2464 [inlined]
  [19] macro expansion
     @ ./lock.jl:376 [inlined]
  [20] __require(into::Module, mod::Symbol)
     @ Base ./loading.jl:2428
  [21] require
     @ ./loading.jl:2404 [inlined]
  [22] eval_import_path
     @ ./module.jl:36 [inlined]
  [23] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr)
     @ Base ./module.jl:111
  [24] top-level scope
     @ ~/.julia/packages/SBMLFBCModels/Xntgh/src/SBMLFBCModels.jl:9
  [25] include(mod::Module, _path::String)
     @ Base ./Base.jl:309
  [26] __require_prelocked(pkg::Base.PkgId, env::String)
     @ Base ./loading.jl:2777
  [27] _require_prelocked(uuidkey::Base.PkgId, env::String)
     @ Base ./loading.jl:2536
  [28] macro expansion
     @ ./loading.jl:2464 [inlined]
  [29] macro expansion
     @ ./lock.jl:376 [inlined]
  [30] __require(into::Module, mod::Symbol)
     @ Base ./loading.jl:2428
  [31] require
     @ ./loading.jl:2404 [inlined]
  [32] eval_import_path
     @ ./module.jl:36 [inlined]
  [33] eval_import_path_all(at::Module, path::Expr, keyword::String)
     @ Base ./module.jl:60
  [34] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})
     @ Base ./module.jl:101
  [35] top-level scope
     @ ~/.julia/packages/sparseQFCA/VIdqW/src/QuantomeRedNet/QuantomeReducer.jl:23
  [36] include(mapexpr::Function, mod::Module, _path::String)
     @ Base ./Base.jl:310
  [37] top-level scope
     @ ~/.julia/packages/sparseQFCA/VIdqW/src/sparseQFCA.jl:19
  [38] include(mod::Module, _path::String)
     @ Base ./Base.jl:309
  [39] __require_prelocked(pkg::Base.PkgId, env::String)
     @ Base ./loading.jl:2777
  [40] _require_prelocked(uuidkey::Base.PkgId, env::String)
     @ Base ./loading.jl:2536
  [41] macro expansion
     @ ./loading.jl:2464 [inlined]
  [42] macro expansion
     @ ./lock.jl:376 [inlined]
  [43] __require(into::Module, mod::Symbol)
     @ Base ./loading.jl:2428
  [44] require
     @ ./loading.jl:2404 [inlined]
  [45] eval_import_path
     @ ./module.jl:36 [inlined]
  [46] eval_import_path_all(at::Module, path::Expr, keyword::String)
     @ Base ./module.jl:60
  [47] _eval_using(to::Module, path::Expr)
     @ Base ./module.jl:137
  [48] top-level scope
     @ none:1
  [49] eval(m::Module, e::Any)
     @ Core ./boot.jl:489
  [50] exec_options(opts::Base.JLOptions)
     @ Base ./client.jl:310
  [51] _start()
     @ Base ./client.jl:577
in expression starting at /home/pkgeval/.julia/packages/Unitful/HCJFR/src/logarithm.jl:127
in expression starting at /home/pkgeval/.julia/packages/Unitful/HCJFR/src/Unitful.jl:1
in expression starting at /home/pkgeval/.julia/packages/SBML/mJIpc/src/SBML.jl:1
in expression starting at /home/pkgeval/.julia/packages/SBMLFBCModels/Xntgh/src/SBMLFBCModels.jl:1
in expression starting at /home/pkgeval/.julia/packages/sparseQFCA/VIdqW/src/QuantomeRedNet/QuantomeReducer.jl:9
in expression starting at /home/pkgeval/.julia/packages/sparseQFCA/VIdqW/src/sparseQFCA.jl:9

Loading failed after 579.21s

ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using sparseQFCA'`, ProcessExited(1)) [1]

Stacktrace:
 [1] pipeline_error
   @ ./process.jl:611 [inlined]
 [2] run(::Cmd; wait::Bool)
   @ Base ./process.jl:526
 [3] run(::Cmd)
   @ Base ./process.jl:523
 [4] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:193
 [5] include(mod::Module, _path::String)
   @ Base ./Base.jl:309
 [6] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:344
 [7] _start()
   @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/evaluate.jl:184

PkgEval failed after 645.46s: there were unidentified errors