Package evaluation to load PDELib on Julia 1.13.0-DEV.1324 (c1d413cf8a*) started at 2025-10-17T23:29:00.036


################################################################################
# Set-up
#


Set-up completed after 0.13s


################################################################################
# Installation
#

Installing PDELib...
   Resolving package versions...
    Updating `~/.julia/environments/v1.13/Project.toml`
  [89250b5f] + PDELib v0.3.0
    Updating `~/.julia/environments/v1.13/Manifest.toml`
⌅ [c3fe647b] + AbstractAlgebra v0.27.10
  [1520ce14] + AbstractTrees v0.4.5
  [7d9f7c33] + Accessors v0.1.42
⌅ [79e6a3ab] + Adapt v3.7.2
  [66dad0bd] + AliasTables v1.1.3
  [dce04be8] + ArgCheck v2.5.0
  [ec485272] + ArnoldiMethod v0.4.0
⌃ [4fba245c] + ArrayInterface v7.7.1
  [30b0a656] + ArrayInterfaceCore v0.1.29
  [dd5226c6] + ArrayInterfaceStaticArraysCore v0.1.4
⌃ [4c555306] + ArrayLayouts v0.8.19
⌅ [15f4f7f2] + AutoHashEquals v0.2.0
⌅ [aae01518] + BandedMatrices v0.17.18
  [198e06fe] + BangBang v0.4.5
  [9718e550] + Baselet v0.1.1
⌅ [e2ed5e7c] + Bijections v0.1.10
  [d360d2e6] + ChainRulesCore v1.26.0
  [944b1d66] + CodecZlib v0.7.8
  [35d6a980] + ColorSchemes v3.31.0
⌅ [3da002f7] + ColorTypes v0.11.5
⌃ [c3611d14] + ColorVectorSpace v0.10.0
⌅ [5ae59095] + Colors v0.12.11
  [861a8166] + Combinatorics v1.0.3
  [38540f10] + CommonSolve v0.2.4
  [bbf7d656] + CommonSubexpressions v0.3.1
  [34da2185] + Compat v4.18.1
  [b152e2b5] + CompositeTypes v0.1.4
  [a33af91c] + CompositionsBase v0.1.2
⌅ [187b0558] + ConstructionBase v1.5.6
  [9a962f9c] + DataAPI v1.16.0
⌅ [864edb3b] + DataStructures v0.18.22
  [e2d170a0] + DataValueInterfaces v1.0.0
  [244e2a9f] + DefineSingletons v0.1.2
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.15.1
  [31c24e10] + Distributions v0.25.122
⌅ [ffbed154] + DocStringExtensions v0.8.6
⌅ [5b8099bc] + DomainSets v0.5.14
⌅ [7c1d4256] + DynamicPolynomials v0.4.6
  [fdbdab4c] + ElasticArrays v1.2.12
  [4e289a0a] + EnumX v1.0.5
  [e2ba6199] + ExprTools v0.1.10
⌅ [cfc395e8] + ExtendableGrids v0.9.17
⌅ [95c220a8] + ExtendableSparse v0.9.6
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  [5789e2e9] + FileIO v1.17.1
⌅ [1a297f60] + FillArrays v0.13.11
⌃ [6a86dc24] + FiniteDiff v2.23.1
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  [59287772] + Formatting v0.4.3
⌅ [f6369f11] + ForwardDiff v0.10.39
  [069b7b12] + FunctionWrappers v1.1.3
  [77dc65aa] + FunctionWrappersWrappers v0.1.3
⌅ [46192b85] + GPUArraysCore v0.1.5
  [68eda718] + GeoFormatTypes v0.4.4
⌃ [cf35fbd7] + GeoInterface v1.4.1
⌅ [5c1252a2] + GeometryBasics v0.4.11
⌅ [0802c0ca] + GradientRobustMultiPhysics v0.10.4
  [86223c79] + Graphs v1.13.1
⌅ [5eed8a63] + GridVisualize v0.5.2
⌅ [0b43b601] + Groebner v0.2.11
⌅ [d5909c97] + GroupsCore v0.4.2
  [34004b35] + HypergeometricFunctions v0.3.28
  [ac1192a8] + HypertextLiteral v0.9.5
  [88f59080] + ILUZero v0.2.0
  [615f187c] + IfElse v0.1.1
  [d25df0c9] + Inflate v0.1.5
  [22cec73e] + InitialValues v0.3.1
  [18e54dd8] + IntegerMathUtils v0.1.3
  [8197267c] + IntervalSets v0.7.11
  [3587e190] + InverseFunctions v0.1.17
  [92d709cd] + IrrationalConstants v0.2.6
  [c8e1da08] + IterTools v1.10.0
  [42fd0dbc] + IterativeSolvers v0.9.4
  [82899510] + IteratorInterfaceExtensions v1.0.0
⌅ [033835bb] + JLD2 v0.4.55
  [692b3bcd] + JLLWrappers v1.7.1
⌅ [ba0b0d4f] + Krylov v0.9.10
  [b964fa9f] + LaTeXStrings v1.4.0
⌃ [2ee39098] + LabelledArrays v1.15.1
⌅ [984bce1d] + LambertW v0.4.6
⌅ [23fbe1c1] + Latexify v0.15.21
  [9c8b4983] + LightXML v0.9.3
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [1914dd2f] + MacroTools v0.5.16
⌅ [7269a6da] + MeshIO v0.4.13
⌅ [e9d8d322] + Metatheory v1.3.5
  [128add7d] + MicroCollections v0.2.0
  [e1d29d7a] + Missings v1.2.0
⌅ [102ac46a] + MultivariatePolynomials v0.4.7
  [d8a4904e] + MutableArithmetics v1.6.6
  [77ba4419] + NaNMath v1.1.3
⌅ [510215fc] + Observables v0.4.0
  [6fe1bfb0] + OffsetArrays v1.17.0
  [bac558e1] + OrderedCollections v1.8.1
  [89250b5f] + PDELib v0.3.0
  [90014a1f] + PDMats v0.11.35
  [d96e819e] + Parameters v0.12.3
⌅ [eebad327] + PkgVersion v0.1.1
⌃ [d236fae5] + PreallocationTools v0.4.24
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.0
  [27ebfcd6] + Primes v0.5.7
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
  [fb686558] + RandomExtensions v0.4.4
  [3cdcf5f2] + RecipesBase v1.3.4
⌅ [731186ca] + RecursiveArrayTools v2.32.3
  [189a3867] + Reexport v1.2.2
  [42d2dcc6] + Referenceables v0.1.3
  [ae029012] + Requires v1.3.1
  [79098fc4] + Rmath v0.8.0
  [7e49a35a] + RuntimeGeneratedFunctions v0.5.15
⌅ [0bca4576] + SciMLBase v1.81.0
  [efcf1570] + Setfield v1.1.2
  [699a6c99] + SimpleTraits v0.9.5
⌅ [57bfcd06] + SimplexGridFactory v0.5.20
  [66db9d55] + SnoopPrecompile v1.0.3
  [a2af1166] + SortingAlgorithms v1.2.2
⌅ [47a9eef4] + SparseDiffTools v1.31.0
  [e56a9233] + Sparspak v0.3.14
  [276daf66] + SpecialFunctions v2.6.1
  [171d559e] + SplittablesBase v0.1.15
  [90137ffa] + StaticArrays v1.9.15
  [1e83bf80] + StaticArraysCore v1.4.3
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.1
  [2913bbd2] + StatsBase v0.34.6
  [4c63d2b9] + StatsFuns v1.5.0
⌅ [09ab397b] + StructArrays v0.6.18
⌅ [d1185830] + SymbolicUtils v0.19.11
⌅ [0c5d862f] + Symbolics v4.14.0
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
  [62fd8b95] + TensorCore v0.1.1
⌅ [8ea1fca8] + TermInterface v0.2.3
  [ac1d9e8a] + ThreadsX v0.1.12
  [a759f4b9] + TimerOutputs v0.5.29
  [3bb67fe8] + TranscodingStreams v0.11.3
  [28d57a85] + Transducers v0.4.85
  [a2a6695c] + TreeViews v0.3.0
  [410a4b4d] + Tricks v0.1.12
  [3a884ed6] + UnPack v1.0.2
  [4004b06d] + VTKBase v1.0.1
  [19fa3120] + VertexSafeGraphs v0.2.0
⌅ [82b139dc] + VoronoiFVM v0.18.10
  [64499a7a] + WriteVTK v1.21.2
  [700de1a5] + ZygoteRules v0.2.7
  [5ae413db] + EarCut_jll v2.2.4+0
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [02c8fc9c] + XML2_jll v2.15.0+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
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  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.13.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [1a1011a3] + SharedArrays v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.11.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.16.0+0
  [e37daf67] + LibGit2_jll v1.9.1+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.9.9
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.7+0
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  [efcefdf7] + PCRE2_jll v10.46.0+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.1+2
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.15.0+0
  [8e850ede] + nghttp2_jll v1.67.1+0
  [3f19e933] + p7zip_jll v17.6.0+0
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`

Installation completed after 10.85s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...
     Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml`
    Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml`

Precompiling package dependencies...
Precompiling packages...
   5960.5 ms  ✓ Latexify


Precompilation completed after 35.4s


################################################################################
# Loading
#

Loading PDELib...
WARNING: Constructor for type "AbstractMatrix" was extended in `BandedMatrices` without explicit qualification or import.
  NOTE: Assumed "AbstractMatrix" refers to `Base.AbstractMatrix`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function AbstractMatrix end`.
  Hint: To silence the warning, qualify `AbstractMatrix` as `Base.AbstractMatrix` in the method signature or explicitly `import Base: AbstractMatrix`.
WARNING: Constructor for type "AbstractArray" was extended in `BandedMatrices` without explicit qualification or import.
  NOTE: Assumed "AbstractArray" refers to `Base.AbstractArray`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function AbstractArray end`.
  Hint: To silence the warning, qualify `AbstractArray` as `Base.AbstractArray` in the method signature or explicitly `import Base: AbstractArray`.
WARNING: Constructor for type "Matrix" was extended in `BandedMatrices` without explicit qualification or import.
  NOTE: Assumed "Matrix" refers to `Base.Matrix`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function Matrix end`.
  Hint: To silence the warning, qualify `Matrix` as `Base.Matrix` in the method signature or explicitly `import Base: Matrix`.
WARNING: Constructor for type "BandedMatrixIndex" was extended in `ArrayInterfaceBandedMatricesExt` without explicit qualification or import.
  NOTE: Assumed "BandedMatrixIndex" refers to `ArrayInterface.BandedMatrixIndex`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function BandedMatrixIndex end`.
  Hint: To silence the warning, qualify `BandedMatrixIndex` as `ArrayInterface.BandedMatrixIndex` in the method signature or explicitly `import ArrayInterface: BandedMatrixIndex`.
WARNING: Constructor for type "Number" was extended in `DomainSets` without explicit qualification or import.
  NOTE: Assumed "Number" refers to `Base.Number`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function Number end`.
  Hint: To silence the warning, qualify `Number` as `Base.Number` in the method signature or explicitly `import Base: Number`.
WARNING: Constructor for type "Matrix" was extended in `AbstractAlgebra` without explicit qualification or import.
  NOTE: Assumed "Matrix" refers to `Base.Matrix`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function Matrix end`.
  Hint: To silence the warning, qualify `Matrix` as `Base.Matrix` in the method signature or explicitly `import Base: Matrix`.
ERROR: LoadError: Alias 'isnegative' is already defined with a different value
Stacktrace:
   [1] error(s::String)
     @ Base ./error.jl:44
   [2] top-level scope
     @ ~/.julia/packages/AbstractAlgebra/FcxWh/src/AliasMacro.jl:29
   [3] include(mapexpr::Function, mod::Module, _path::String)
     @ Base ./Base.jl:310
   [4] top-level scope
     @ ~/.julia/packages/AbstractAlgebra/FcxWh/src/AbstractAlgebra.jl:731
   [5] include(mod::Module, _path::String)
     @ Base ./Base.jl:309
   [6] __require_prelocked(pkg::Base.PkgId, env::String)
     @ Base ./loading.jl:2777
   [7] _require_prelocked(uuidkey::Base.PkgId, env::String)
     @ Base ./loading.jl:2536
   [8] macro expansion
     @ ./loading.jl:2464 [inlined]
   [9] macro expansion
     @ ./lock.jl:376 [inlined]
  [10] __require(into::Module, mod::Symbol)
     @ Base ./loading.jl:2428
  [11] require
     @ ./loading.jl:2404 [inlined]
  [12] eval_import_path
     @ ./module.jl:36 [inlined]
  [13] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr)
     @ Base ./module.jl:111
  [14] top-level scope
     @ ~/.julia/packages/Groebner/fcANv/src/Groebner.jl:52
  [15] include(mod::Module, _path::String)
     @ Base ./Base.jl:309
  [16] __require_prelocked(pkg::Base.PkgId, env::String)
     @ Base ./loading.jl:2777
  [17] _require_prelocked(uuidkey::Base.PkgId, env::String)
     @ Base ./loading.jl:2536
  [18] macro expansion
     @ ./loading.jl:2464 [inlined]
  [19] macro expansion
     @ ./lock.jl:376 [inlined]
  [20] __require(into::Module, mod::Symbol)
     @ Base ./loading.jl:2428
  [21] require
     @ ./loading.jl:2404 [inlined]
  [22] eval_import_path
     @ ./module.jl:36 [inlined]
  [23] eval_import_path_all(at::Module, path::Expr, keyword::String)
     @ Base ./module.jl:60
  [24] _eval_using(to::Module, path::Expr)
     @ Base ./module.jl:137
  [25] top-level scope
     @ ~/.julia/packages/Symbolics/UrqtQ/src/Symbolics.jl:115
  [26] include(mod::Module, _path::String)
     @ Base ./Base.jl:309
  [27] __require_prelocked(pkg::Base.PkgId, env::String)
     @ Base ./loading.jl:2777
  [28] _require_prelocked(uuidkey::Base.PkgId, env::String)
     @ Base ./loading.jl:2536
  [29] macro expansion
     @ ./loading.jl:2464 [inlined]
  [30] macro expansion
     @ ./lock.jl:376 [inlined]
  [31] __require(into::Module, mod::Symbol)
     @ Base ./loading.jl:2428
  [32] require
     @ ./loading.jl:2404 [inlined]
  [33] eval_import_path
     @ ./module.jl:36 [inlined]
  [34] eval_import_path_all(at::Module, path::Expr, keyword::String)
     @ Base ./module.jl:60
  [35] _eval_using(to::Module, path::Expr)
     @ Base ./module.jl:137
  [36] top-level scope
     @ ~/.julia/packages/VoronoiFVM/LmuTr/src/VoronoiFVM.jl:34
  [37] include(mod::Module, _path::String)
     @ Base ./Base.jl:309
  [38] __require_prelocked(pkg::Base.PkgId, env::String)
     @ Base ./loading.jl:2777
  [39] _require_prelocked(uuidkey::Base.PkgId, env::String)
     @ Base ./loading.jl:2536
  [40] macro expansion
     @ ./loading.jl:2464 [inlined]
  [41] macro expansion
     @ ./lock.jl:376 [inlined]
  [42] __require(into::Module, mod::Symbol)
     @ Base ./loading.jl:2428
  [43] require
     @ ./loading.jl:2404 [inlined]
  [44] eval_import_path
     @ ./module.jl:36 [inlined]
  [45] eval_import_path_all(at::Module, path::Expr, keyword::String)
     @ Base ./module.jl:60
  [46] _eval_using(to::Module, path::Expr)
     @ Base ./module.jl:137
  [47] top-level scope
     @ ~/.julia/packages/PDELib/XK32d/src/PDELib.jl:8
  [48] include(mod::Module, _path::String)
     @ Base ./Base.jl:309
  [49] __require_prelocked(pkg::Base.PkgId, env::String)
     @ Base ./loading.jl:2777
  [50] _require_prelocked(uuidkey::Base.PkgId, env::String)
     @ Base ./loading.jl:2536
  [51] macro expansion
     @ ./loading.jl:2464 [inlined]
  [52] macro expansion
     @ ./lock.jl:376 [inlined]
  [53] __require(into::Module, mod::Symbol)
     @ Base ./loading.jl:2428
  [54] require
     @ ./loading.jl:2404 [inlined]
  [55] eval_import_path
     @ ./module.jl:36 [inlined]
  [56] eval_import_path_all(at::Module, path::Expr, keyword::String)
     @ Base ./module.jl:60
  [57] _eval_using(to::Module, path::Expr)
     @ Base ./module.jl:137
  [58] top-level scope
     @ none:1
  [59] eval(m::Module, e::Any)
     @ Core ./boot.jl:489
  [60] exec_options(opts::Base.JLOptions)
     @ Base ./client.jl:310
  [61] _start()
     @ Base ./client.jl:577
in expression starting at /home/pkgeval/.julia/packages/AbstractAlgebra/FcxWh/src/Aliases.jl:19
in expression starting at /home/pkgeval/.julia/packages/AbstractAlgebra/FcxWh/src/AbstractAlgebra.jl:1
in expression starting at /home/pkgeval/.julia/packages/Groebner/fcANv/src/Groebner.jl:2
in expression starting at /home/pkgeval/.julia/packages/Symbolics/UrqtQ/src/Symbolics.jl:1
in expression starting at /home/pkgeval/.julia/packages/VoronoiFVM/LmuTr/src/VoronoiFVM.jl:1
in expression starting at /home/pkgeval/.julia/packages/PDELib/XK32d/src/PDELib.jl:1

Loading failed after 554.96s

ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using PDELib'`, ProcessExited(1)) [1]

Stacktrace:
 [1] pipeline_error
   @ ./process.jl:611 [inlined]
 [2] run(::Cmd; wait::Bool)
   @ Base ./process.jl:526
 [3] run(::Cmd)
   @ Base ./process.jl:523
 [4] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:193
 [5] include(mod::Module, _path::String)
   @ Base ./Base.jl:309
 [6] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:344
 [7] _start()
   @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/evaluate.jl:184

PkgEval failed after 715.83s: there were unidentified errors