Package evaluation to test NetCDFTools on Julia 1.13.0-DEV.1324 (c1d413cf8a*) started at 2025-10-17T21:02:58.950 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.62s ################################################################################ # Installation # Installing NetCDFTools... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [13b2da74] + NetCDFTools v0.2.4 Updating `~/.julia/environments/v1.13/Manifest.toml` [66dad0bd] + AliasTables v1.1.3 [179af706] + CFTime v0.2.4 [1fbeeb36] + CommonDataModel v0.4.1 [34da2185] + Compat v4.18.1 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.0 [864edb3b] + DataStructures v0.19.1 [e2d170a0] + DataValueInterfaces v1.0.0 [3c3547ce] + DiskArrays v0.4.17 [ffbed154] + DocStringExtensions v0.9.5 [c27321d9] + Glob v1.3.1 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [e58298cb] + Ipaper v0.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [8ac3fa9e] + LRUCache v1.6.2 [b964fa9f] + LaTeXStrings v1.4.0 [fcefd6c4] + LambdaFn v0.3.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [da04e1cc] + MPI v0.20.23 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [85f8d34a] + NCDatasets v0.14.9 [13b2da74] + NetCDFTools v0.2.4 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [d96e819e] + Parameters v0.12.3 [eebad327] + PkgVersion v0.3.3 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v3.1.0 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [91c51154] + SentinelArrays v1.4.8 [a2af1166] + SortingAlgorithms v1.2.2 [25a4c9b9] + SpatialRasterLite v0.1.1 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.6 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3a884ed6] + UnPack v1.0.2 [0b7ba130] + Blosc_jll v1.21.7+0 [6e34b625] + Bzip2_jll v1.0.9+0 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [5ced341a] + Lz4_jll v1.10.1+0 [7cb0a576] + MPICH_jll v4.3.1+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [7243133f] + NetCDF_jll v401.900.300+0 [fe0851c0] + OpenMPI_jll v5.0.8+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [ffd25f8a] + XZ_jll v5.8.1+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] + libaec_jll v1.1.4+0 [337d8026] + libzip_jll v1.11.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.9.9 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.46.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.67.1+0 [3f19e933] + p7zip_jll v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 11.12s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 76.09s ################################################################################ # Testing # Testing NetCDFTools Status `/tmp/jl_Ns0MiD/Project.toml` [179af706] CFTime v0.2.4 [a93c6f00] DataFrames v1.8.0 [ffbed154] DocStringExtensions v0.9.5 [e58298cb] Ipaper v0.3.1 `https://github.com/jl-pkgs/Ipaper.jl#` [85f8d34a] NCDatasets v0.14.9 [13b2da74] NetCDFTools v0.2.4 [d96e819e] Parameters v0.12.3 [aea7be01] PrecompileTools v1.3.3 [92933f4c] ProgressMeter v1.11.0 [189a3867] Reexport v1.2.2 [25a4c9b9] SpatialRasterLite v0.1.1 `https://github.com/jl-pkgs/SpatialRasterLite.jl#` [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.6 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_Ns0MiD/Manifest.toml` [66dad0bd] AliasTables v1.1.3 [179af706] CFTime v0.2.4 [1fbeeb36] CommonDataModel v0.4.1 [34da2185] Compat v4.18.1 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.0 [864edb3b] DataStructures v0.19.1 [e2d170a0] DataValueInterfaces v1.0.0 [3c3547ce] DiskArrays v0.4.17 [ffbed154] DocStringExtensions v0.9.5 [c27321d9] Glob v1.3.1 [842dd82b] InlineStrings v1.4.5 [41ab1584] InvertedIndices v1.3.1 [e58298cb] Ipaper v0.3.1 `https://github.com/jl-pkgs/Ipaper.jl#` [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [8ac3fa9e] LRUCache v1.6.2 [b964fa9f] LaTeXStrings v1.4.0 [fcefd6c4] LambdaFn v0.3.1 [2ab3a3ac] LogExpFunctions v0.3.29 [da04e1cc] MPI v0.20.23 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [85f8d34a] NCDatasets v0.14.9 [13b2da74] NetCDFTools v0.2.4 [6fe1bfb0] OffsetArrays v1.17.0 [bac558e1] OrderedCollections v1.8.1 [d96e819e] Parameters v0.12.3 [eebad327] PkgVersion v0.3.3 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [08abe8d2] PrettyTables v3.1.0 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [91c51154] SentinelArrays v1.4.8 [a2af1166] SortingAlgorithms v1.2.2 [25a4c9b9] SpatialRasterLite v0.1.1 `https://github.com/jl-pkgs/SpatialRasterLite.jl#` [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.6 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3a884ed6] UnPack v1.0.2 [0b7ba130] Blosc_jll v1.21.7+0 [6e34b625] Bzip2_jll v1.0.9+0 [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.2+0 [94ce4f54] Libiconv_jll v1.18.0+0 [5ced341a] Lz4_jll v1.10.1+0 [7cb0a576] MPICH_jll v4.3.1+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [7243133f] NetCDF_jll v401.900.300+0 [fe0851c0] OpenMPI_jll v5.0.8+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [ffd25f8a] XZ_jll v5.8.1+0 [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] libaec_jll v1.1.4+0 [337d8026] libzip_jll v1.11.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.16.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.9.9 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.46.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.67.1+0 [3f19e933] p7zip_jll v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Reading data... 7.315049 seconds (4.84 M allocations: 249.851 MiB, 2.45% gc time, 99.78% compilation time) Writing data... 13.940830 seconds (12.55 M allocations: 644.663 MiB, 1.30% gc time, 99.93% compilation time) Test Summary: | Pass Total Time nc_combine | 1 1 39.7s Reading dims... 0.001200 seconds (1.24 k allocations: 46.953 KiB) Reading data... 2.246200 seconds (3.64 M allocations: 187.117 MiB, 2.79% gc time, 99.92% compilation time) Writing data... 2.051620 seconds (2.05 M allocations: 107.445 MiB, 94.75% compilation time) Test Summary: | Pass Total Time nc_subset | 1 1 9.7s Array{Float64, 3} | (70, 40, 365) | 7.8 Mb [running] : test_year.nc Reading data... Processing ... 5.702162 seconds (2.23 M allocations: 119.050 MiB, 99.90% compilation time) Writing data... 0.043234 seconds (6.33 k allocations: 329.477 KiB, 67.82% compilation time) [running] : test_mon.nc Reading data... Processing ... 0.007410 seconds (89 allocations: 270.227 KiB) Writing data... 0.003730 seconds (1.18 k allocations: 303.477 KiB) Test Summary: | Pass Total Time nc_agg | 2 2 27.0s Test Summary: | Pass Total Time updateMask | 2 2 4.7s Test Summary: | Pass Total Time split_chunk | 4 4 2.0s Test Summary: | Pass Total Time weighted_nanmean | 2 2 1.5s nc_attr!: Error During Test at /home/pkgeval/.julia/packages/NetCDFTools/JZdF2/test/test-nc_attr.jl:1 Got exception outside of a @test NetCDF error: Opening path /home/pkgeval/.julia/packages/NetCDFTools/JZdF2//data/HI_tasmax_day_ACCESS-CM2_historical_r1i1p1f1_gn_18500101.nc: NetCDF: HDF error (NetCDF error code: -101) Stacktrace: [1] nc_open(path::String, mode::UInt16) @ NCDatasets ~/.julia/packages/NCDatasets/76uhE/src/netcdf_c.jl:276 [2] NCDatasets.NCDataset(filename::String, mode::String; format::Symbol, share::Bool, diskless::Bool, persist::Bool, memory::Nothing, maskingvalue::Missing, attrib::Vector{Any}) @ NCDatasets ~/.julia/packages/NCDatasets/76uhE/src/dataset.jl:212 [3] NCDataset @ ~/.julia/packages/NCDatasets/76uhE/src/dataset.jl:171 [inlined] [4] #nc_open#14 @ ~/.julia/packages/NetCDFTools/JZdF2/src/nc_info.jl:21 [inlined] [5] nc_open(f::String, args::String) @ NetCDFTools ~/.julia/packages/NetCDFTools/JZdF2/src/nc_info.jl:20 [6] nc_open(::NetCDFTools.var"#nc_attr!##0#nc_attr!##1"{Dict{String, String}}, ::String, ::Vararg{String}; kwargs::@Kwargs{}) @ NetCDFTools ~/.julia/packages/NetCDFTools/JZdF2/src/nc_info.jl:25 [7] nc_open @ ~/.julia/packages/NetCDFTools/JZdF2/src/nc_info.jl:24 [inlined] [8] nc_attr!(f::String, attr::Dict{String, String}) @ NetCDFTools ~/.julia/packages/NetCDFTools/JZdF2/src/nc_attr.jl:9 [9] top-level scope @ ~/.julia/packages/NetCDFTools/JZdF2/test/test-nc_attr.jl:2 [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [11] macro expansion @ ~/.julia/packages/NetCDFTools/JZdF2/test/test-nc_attr.jl:4 [inlined] [12] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [13] top-level scope @ ~/.julia/packages/NetCDFTools/JZdF2/test/runtests.jl:17 [14] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [15] top-level scope @ none:6 [16] eval(m::Module, e::Any) @ Core ./boot.jl:489 [17] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [18] _start() @ Base ./client.jl:577 Test Summary: | Error Total Time nc_attr! | 1 1 3.0s RNG of the outermost testset: Random.Xoshiro(0x68c49237d64e2ef7, 0xc2c21ec444cd64df, 0xd1dd509a5a1b8199, 0x23abcbc84d636afa, 0xc410140284f7d267) ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/NetCDFTools/JZdF2/test/test-nc_attr.jl:1 in expression starting at /home/pkgeval/.julia/packages/NetCDFTools/JZdF2/test/runtests.jl:17 Testing failed after 124.36s ERROR: LoadError: Package NetCDFTools errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2674 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2523 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:548 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:525 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 275.76s: package tests unexpectedly errored