Package evaluation to load ImgCIFHandler on Julia 1.13.0-DEV.1324 (c1d413cf8a*) started at 2025-10-17T22:31:40.013 ################################################################################ # Set-up # Set-up completed after 0.14s ################################################################################ # Installation # Installing ImgCIFHandler... Resolving package versions... Installed Bzip2_jll ─────────────────── v1.0.9+0 Installed Xorg_libpciaccess_jll ─────── v0.18.1+0 Installed MosaicViews ───────────────── v0.3.4 Installed OrderedCollections ────────── v1.8.1 Installed Lz4_jll ───────────────────── v1.10.1+0 Installed MKL_jll ───────────────────── v2025.2.0+0 Installed CommonWorldInvalidations ──── v1.0.0 Installed InlineStrings ─────────────── v1.4.5 Installed SentinelArrays ────────────── v1.4.8 Installed HDF5_jll ──────────────────── v1.14.6+0 Installed Tables ────────────────────── v1.12.1 Installed CustomUnitRanges ──────────── v1.0.2 Installed ArgCheck ──────────────────── v2.5.0 Installed StaticArrayInterface ──────── v1.8.0 Installed HistogramThresholding ─────── v0.3.1 Installed Reexport ──────────────────── v1.2.2 Installed Missings ──────────────────── v1.2.0 Installed TableTraits ───────────────── v1.0.1 Installed Static ────────────────────── v1.3.0 Installed FileIO ────────────────────── v1.17.1 Installed Preferences ───────────────── v1.5.0 Installed Polynomials ───────────────── v4.1.0 Installed SortingAlgorithms ─────────── v1.2.2 Installed LaTeXStrings ──────────────── v1.4.0 Installed MappedArrays ──────────────── v0.4.2 Installed Crayons ───────────────────── v4.1.1 Installed Inflate ───────────────────── v0.1.5 Installed Lerche ────────────────────── v0.5.7 Installed DataStructures ────────────── v0.18.22 Installed MacroTools ────────────────── v0.5.16 Installed URIs ──────────────────────── v1.6.1 Installed H5Zzstd ───────────────────── v0.1.2 Installed libaec_jll ────────────────── v1.1.4+0 Installed CodecZstd ─────────────────── v0.8.6 Installed oneTBB_jll ────────────────── v2022.0.0+1 Installed CodecZlib ─────────────────── v0.7.8 Installed Quaternions ───────────────── v0.7.6 Installed ArrayInterface ────────────── v7.21.0 Installed H5Zbzip2 ──────────────────── v0.1.2 Installed DataValueInterfaces ───────── v1.0.0 Installed IntelOpenMP_jll ───────────── v2025.2.0+0 Installed RealDot ───────────────────── v0.1.0 Installed Hwloc_jll ─────────────────── v2.12.2+0 Installed OpenMPI_jll ───────────────── v5.0.8+0 Installed ColorVectorSpace ──────────── v0.11.0 Installed bitshuffle_jll ────────────── v0.5.2+0 Installed ZipArchives ───────────────── v2.5.1 Installed Setfield ──────────────────── v1.1.2 Installed SimpleBufferStream ────────── v1.2.0 Installed ImageBinarization ─────────── v0.3.1 Installed CBFlib_small_jll ──────────── v0.9.6+0 Installed PooledArrays ──────────────── v1.4.3 Installed CrystalInfoFramework ──────── v1.1.0 Installed ImageCore ─────────────────── v0.10.5 Installed PkgVersion ────────────────── v0.3.3 Installed StackViews ────────────────── v0.1.2 Installed DocStringExtensions ───────── v0.9.5 Installed MPICH_jll ─────────────────── v4.3.1+0 Installed TiledIteration ────────────── v0.5.0 Installed MicrosoftMPI_jll ──────────── v10.1.4+3 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed RecipesBase ───────────────── v1.3.4 Installed DataAPI ───────────────────── v1.16.0 Installed InvertedIndices ───────────── v1.3.1 Installed FFTViews ──────────────────── v0.3.2 Installed SIMD ──────────────────────── v3.7.2 Installed StaticArraysCore ──────────── v1.4.3 Installed CodecInflate64 ────────────── v0.1.3 Installed Colors ────────────────────── v0.13.1 Installed StaticArrays ──────────────── v1.9.15 Installed AbstractFFTs ──────────────── v1.5.0 Installed ColorTypes ────────────────── v0.12.1 Installed StringManipulation ────────── v0.4.1 Installed Requires ──────────────────── v1.3.1 Installed SciMLPublic ───────────────── v1.0.0 Installed JLLWrappers ───────────────── v1.7.1 Installed CodecLz4 ──────────────────── v0.4.6 Installed PaddedViews ───────────────── v0.5.12 Installed Adapt ─────────────────────── v4.4.0 Installed TiffImages ────────────────── v0.11.6 Installed DataFrames ────────────────── v1.8.0 Installed PrettyTables ──────────────── v3.1.0 Installed Compat ────────────────────── v4.18.1 Installed ConstructionBase ──────────── v1.6.0 Installed TensorCore ────────────────── v0.1.1 Installed TranscodingStreams ────────── v0.11.3 Installed Statistics ────────────────── v1.11.1 Installed PrecompileTools ───────────── v1.3.3 Installed ImageBase ─────────────────── v0.1.7 Installed Blosc ─────────────────────── v0.7.3 Installed ProgressMeter ─────────────── v1.11.0 Installed OffsetArrays ──────────────── v1.17.0 Installed Blosc_jll ─────────────────── v1.21.7+0 Installed XML2_jll ──────────────────── v2.13.9+0 Installed IfElse ────────────────────── v0.1.1 Installed H5Zbitshuffle ─────────────── v0.1.3 Installed ComputationalResources ────── v0.3.2 Installed CodecBzip2 ────────────────── v0.8.5 Installed FixedPointNumbers ─────────── v0.8.5 Installed MPIPreferences ────────────── v0.1.11 Installed Rotations ─────────────────── v1.7.1 Installed H5Zblosc ──────────────────── v0.1.2 Installed FFTW_jll ──────────────────── v3.3.11+0 Installed FFTW ──────────────────────── v1.10.0 Installed CatIndices ────────────────── v0.2.2 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed IndirectArrays ────────────── v1.0.0 Installed H5Zlz4 ────────────────────── v0.1.1 Installed MPItrampoline_jll ─────────── v5.5.4+0 Installed InputBuffers ──────────────── v1.1.1 Installed HDF5 ──────────────────────── v0.17.2 Installed ImageFiltering ────────────── v0.7.12 Installed ImgCIFHandler ─────────────── v0.14.0 Installing 13 artifacts Installed artifact Blosc 44.2 KiB Installed artifact Xorg_libpciaccess 24.8 KiB Installed artifact Lz4 239.7 KiB Installed artifact bitshuffle 14.2 KiB Installed artifact Bzip2 503.5 KiB Installed artifact libaec 49.6 KiB Installed artifact FFTW 2.2 MiB Installed artifact XML2 2.5 MiB Installed artifact Libiconv 1.9 MiB Installed artifact Hwloc 3.5 MiB Installed artifact MPICH 3.3 MiB Installed artifact CBFlib_small 1.4 MiB Installed artifact HDF5 5.7 MiB Updating `~/.julia/environments/v1.13/Project.toml` [c7e9ad6d] + ImgCIFHandler v0.14.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [79e6a3ab] + Adapt v4.4.0 [dce04be8] + ArgCheck v2.5.0 [4fba245c] + ArrayInterface v7.21.0 [a74b3585] + Blosc v0.7.3 [aafaddc9] + CatIndices v0.2.2 [523fee87] + CodecBzip2 v0.8.5 [6309b1aa] + CodecInflate64 v0.1.3 [5ba52731] + CodecLz4 v0.4.6 [944b1d66] + CodecZlib v0.7.8 [6b39b394] + CodecZstd v0.8.6 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [ed09eef8] + ComputationalResources v0.3.2 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 ⌅ [6007d9b0] + CrystalInfoFramework v1.1.0 [dc8bdbbb] + CustomUnitRanges v1.0.2 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.0 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [ffbed154] + DocStringExtensions v0.9.5 [4f61f5a4] + FFTViews v0.3.2 [7a1cc6ca] + FFTW v1.10.0 [5789e2e9] + FileIO v1.17.1 [53c48c17] + FixedPointNumbers v0.8.5 [51b4e782] + H5Zbitshuffle v0.1.3 [c8ec2601] + H5Zblosc v0.1.2 [094576f2] + H5Zbzip2 v0.1.2 [eb20ec05] + H5Zlz4 v0.1.1 [f6f2d980] + H5Zzstd v0.1.2 [f67ccb44] + HDF5 v0.17.2 [2c695a8d] + HistogramThresholding v0.3.1 [615f187c] + IfElse v0.1.1 [c817782e] + ImageBase v0.1.7 [cbc4b850] + ImageBinarization v0.3.1 [a09fc81d] + ImageCore v0.10.5 [6a3955dd] + ImageFiltering v0.7.12 [c7e9ad6d] + ImgCIFHandler v0.14.0 [9b13fd28] + IndirectArrays v1.0.0 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.5 [0c81fc1b] + InputBuffers v1.1.1 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [b964fa9f] + LaTeXStrings v1.4.0 [d42ef402] + Lerche v0.5.7 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [dbb5928d] + MappedArrays v0.4.2 [e1d29d7a] + Missings v1.2.0 [e94cdb99] + MosaicViews v0.3.4 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [5432bcbf] + PaddedViews v0.5.12 [eebad327] + PkgVersion v0.3.3 [f27b6e38] + Polynomials v4.1.0 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v3.1.0 [92933f4c] + ProgressMeter v1.11.0 [94ee1d12] + Quaternions v0.7.6 [c1ae055f] + RealDot v0.1.0 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [6038ab10] + Rotations v1.7.1 [fdea26ae] + SIMD v3.7.2 [431bcebd] + SciMLPublic v1.0.0 [91c51154] + SentinelArrays v1.4.8 [efcf1570] + Setfield v1.1.2 [777ac1f9] + SimpleBufferStream v1.2.0 [a2af1166] + SortingAlgorithms v1.2.2 [cae243ae] + StackViews v0.1.2 [aedffcd0] + Static v1.3.0 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [731e570b] + TiffImages v0.11.6 [06e1c1a7] + TiledIteration v0.5.0 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [49080126] + ZipArchives v2.5.1 [0b7ba130] + Blosc_jll v1.21.7+0 [6e34b625] + Bzip2_jll v1.0.9+0 [9b99e207] + CBFlib_small_jll v0.9.6+0 [f5851436] + FFTW_jll v3.3.11+0 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [5ced341a] + Lz4_jll v1.10.1+0 [856f044c] + MKL_jll v2025.2.0+0 [7cb0a576] + MPICH_jll v4.3.1+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.8+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [228fe19c] + bitshuffle_jll v0.5.2+0 [477f73a3] + libaec_jll v1.1.4+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.9.9 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.46.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.67.1+0 [3f19e933] + p7zip_jll v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 20.96s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 4532.4 ms ✓ MacroTools 1683.3 ms ✓ InlineStrings 798.5 ms ✓ Reexport 982.3 ms ✓ MappedArrays 894.7 ms ✓ TensorCore 1119.7 ms ✓ ConstructionBase 783.8 ms ✓ DataValueInterfaces 1008.0 ms ✓ Inflate 877.7 ms ✓ ArgCheck 1272.4 ms ✓ TranscodingStreams 841.1 ms ✓ LaTeXStrings 1062.5 ms ✓ Statistics 882.1 ms ✓ StaticArraysCore 759.1 ms ✓ IfElse 797.8 ms ✓ SimpleBufferStream 883.8 ms ✓ DataAPI 865.4 ms ✓ SciMLPublic 754.9 ms ✓ RealDot 765.5 ms ✓ CommonWorldInvalidations 1161.3 ms ✓ URIs 916.9 ms ✓ InputBuffers 840.4 ms ✓ InvertedIndices 741.9 ms ✓ CustomUnitRanges 1041.2 ms ✓ AbstractFFTs 1002.1 ms ✓ ComputationalResources 822.0 ms ✓ IndirectArrays 1622.8 ms ✓ OrderedCollections 1103.9 ms ✓ DocStringExtensions 1666.6 ms ✓ OffsetArrays 755.3 ms ✓ IteratorInterfaceExtensions 1819.3 ms ✓ Crayons 1174.5 ms ✓ Requires 2783.3 ms ✓ SentinelArrays 1806.1 ms ✓ ProgressMeter 1156.0 ms ✓ Compat 1139.9 ms ✓ Preferences 4303.5 ms ✓ PkgVersion 1003.2 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 1470.2 ms ✓ CodecInflate64 1650.6 ms ✓ CodecZstd 986.9 ms ✓ CodecZlib 1303.5 ms ✓ Statistics → SparseArraysExt 3564.5 ms ✓ FixedPointNumbers 960.1 ms ✓ Missings 989.5 ms ✓ PooledArrays 1051.8 ms ✓ Quaternions 898.5 ms ✓ PaddedViews 811.4 ms ✓ StackViews 851.5 ms ✓ CatIndices 749.0 ms ✓ TableTraits 917.2 ms ✓ Adapt 8718.5 ms ✓ FileIO 850.2 ms ✓ Compat → CompatLinearAlgebraExt 898.7 ms ✓ PrecompileTools 1182.6 ms ✓ JLLWrappers 1423.6 ms ✓ MPIPreferences 3458.1 ms ✓ Setfield 2761.9 ms ✓ ColorTypes 975.8 ms ✓ MosaicViews 1862.4 ms ✓ Tables 1143.4 ms ✓ ArrayInterface 1294.1 ms ✓ Adapt → AdaptSparseArraysExt 857.5 ms ✓ OffsetArrays → OffsetArraysAdaptExt 3860.7 ms ✓ DataStructures 3155.2 ms ✓ StringManipulation 16867.6 ms ✓ SIMD 13459.2 ms ✓ StaticArrays 2842.4 ms ✓ RecipesBase 5402.1 ms ✓ Static 9009.2 ms ✓ ZipArchives 1437.2 ms ✓ CBFlib_small_jll 1430.7 ms ✓ Bzip2_jll 1429.1 ms ✓ Lz4_jll 1113.2 ms ✓ MicrosoftMPI_jll 4697.8 ms ✓ IntelOpenMP_jll 4895.6 ms ✓ oneTBB_jll 1434.7 ms ✓ FFTW_jll 1405.1 ms ✓ libaec_jll 1385.6 ms ✓ Xorg_libpciaccess_jll 1428.2 ms ✓ Libiconv_jll 4599.5 ms ✓ MPItrampoline_jll 1303.1 ms ✓ ColorTypes → StyledStringsExt 8204.8 ms ✓ Colors 3757.2 ms ✓ ColorVectorSpace 777.9 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 1290.9 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 1631.3 ms ✓ SortingAlgorithms 21685.8 ms ✓ Lerche 37793.8 ms ✓ PrettyTables 1474.0 ms ✓ StaticArrays → StaticArraysStatisticsExt 1489.6 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 5316.9 ms ✓ Rotations 1423.0 ms ✓ Adapt → AdaptStaticArraysExt 35627.8 ms ✓ Polynomials 11918.0 ms ✓ StaticArrayInterface 1002.0 ms ✓ CodecBzip2 1796.4 ms ✓ CodecLz4 1378.0 ms ✓ bitshuffle_jll 1421.5 ms ✓ Blosc_jll 10977.5 ms ✓ MKL_jll 1510.4 ms ✓ XML2_jll 54738.0 ms ✓ TiffImages 32562.2 ms ✓ ImageCore 90590.0 ms ✓ DataFrames 2024.7 ms ✓ Rotations → RotationsRecipesBaseExt 1056.3 ms ✓ StaticArrayInterface → StaticArrayInterfaceOffsetArraysExt 1621.0 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 1072.8 ms ✓ Blosc 6886.9 ms ✓ FFTW 1486.9 ms ✓ Hwloc_jll 4547.1 ms ✓ ImageBase 2 dependencies had output during precompilation: ┌ Lerche │ WARNING: Constructor for type "String" was extended in `Lerche` without explicit qualification or import. │ NOTE: Assumed "String" refers to `Base.String`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function String end`. │ Hint: To silence the warning, qualify `String` as `Base.String` in the method signature or explicitly `import Base: String`. └ ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ Precompilation completed after 554.88s ################################################################################ # Loading # Loading ImgCIFHandler... ERROR: LoadError: MethodError: no method matching Lerche.PatternRE(::String, ::SubString{String}) The type `Lerche.PatternRE` exists, but no method is defined for this combination of argument types when trying to construct it. Closest candidates are: Lerche.PatternRE(::Any, ::Any, !Matched::Any) @ Lerche ~/.julia/packages/Lerche/xNSsO/src/lexer.jl:46 Lerche.PatternRE(::String, !Matched::Set{Char}, !Matched::Any) @ Lerche ~/.julia/packages/Lerche/xNSsO/src/lexer.jl:46 Lerche.PatternRE(::Any; flags) @ Lerche ~/.julia/packages/Lerche/xNSsO/src/lexer.jl:51 ... Stacktrace: [1] _literal_to_pattern(literal::Lerche.Token) @ Lerche ~/.julia/packages/Lerche/xNSsO/src/load_grammar.jl:492 [2] transformer_func(pl::Lerche.PrepareLiterals, ::Val{:literal}, literal::Lerche.Token) @ Lerche ~/.julia/packages/Lerche/xNSsO/src/load_grammar.jl:500 [3] transformer_func(x::Lerche.PrepareLiterals, y::Val{:literal}, meta::Lerche.Meta, z::Vector{Any}) @ Lerche ~/.julia/packages/Lerche/xNSsO/src/utils.jl:234 [4] _call_userfunc(t::Lerche.PrepareLiterals, tr::Lerche.Tree; new_children::Nothing) @ Lerche ~/.julia/packages/Lerche/xNSsO/src/visitors.jl:124 [5] _call_userfunc @ ~/.julia/packages/Lerche/xNSsO/src/visitors.jl:118 [inlined] [6] _transform_tree @ ~/.julia/packages/Lerche/xNSsO/src/visitors.jl:201 [inlined] [7] (::Lerche.var"#_transform_children##0#_transform_children##1"{Lerche.PrepareLiterals})(c::Lerche.Tree) @ Lerche ~/.julia/packages/Lerche/xNSsO/src/visitors.jl:138 [8] iterate @ ./generator.jl:48 [inlined] [9] _collect(c::Vector{Any}, itr::Base.Generator{Vector{Any}, Lerche.var"#_transform_children##0#_transform_children##1"{Lerche.PrepareLiterals}}, ::Base.EltypeUnknown, isz::Base.HasShape{1}) @ Base ./array.jl:848 [10] collect_similar @ ./array.jl:763 [inlined] [11] map @ ./abstractarray.jl:3390 [inlined] [12] _transform_children(t::Lerche.PrepareLiterals, children::Vector{Any}) @ Lerche ~/.julia/packages/Lerche/xNSsO/src/visitors.jl:135 [13] transform(tip::Lerche.PrepareLiterals, tree::Lerche.Tree) @ Lerche ~/.julia/packages/Lerche/xNSsO/src/visitors.jl:212 [14] transform(tc::Lerche.TransformerChain, tree::Lerche.Tree) @ Lerche ~/.julia/packages/Lerche/xNSsO/src/visitors.jl:195 [15] (::Lerche.var"#compile##2#compile##3")(::Tuple{String, Tuple{Lerche.Tree, Int64}}) @ Lerche ./none:-1 [16] iterate @ ./generator.jl:48 [inlined] [17] grow_to! @ ./array.jl:901 [inlined] [18] collect(itr::Base.Generator{Base.Iterators.Filter{Lerche.var"#compile##4#compile##5", Vector{Tuple{String, Tuple{Lerche.Tree, Int64}}}}, Lerche.var"#compile##2#compile##3"}) @ Base ./array.jl:825 [19] compile(g::Lerche.Grammar, start::Vector{String}, terminals_to_keep::Set{Any}) @ Lerche ~/.julia/packages/Lerche/xNSsO/src/load_grammar.jl:613 [20] Lerche.Lark(grammar::String, loptions::Dict{String, Any}, source::String, cache_file::String) @ Lerche ~/.julia/packages/Lerche/xNSsO/src/lark.jl:190 [21] Lerche.Lark(grammar::String; options::@Kwargs{start::String, parser::String, lexer::String}) @ Lerche ~/.julia/packages/Lerche/xNSsO/src/lark.jl:123 [22] kwcall(::@NamedTuple{start::String, parser::String, lexer::String}, ::Type{Lerche.Lark}, grammar::String) @ Lerche ~/.julia/packages/Lerche/xNSsO/src/lark.jl:120 [23] top-level scope @ ~/.julia/packages/CrystalInfoFramework/PJp1x/src/cif2_transformer.jl:18 [24] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [25] top-level scope @ ~/.julia/packages/CrystalInfoFramework/PJp1x/src/CrystalInfoFramework.jl:48 [26] include(mod::Module, _path::String) @ Base ./Base.jl:309 [27] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2777 [28] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2536 [29] macro expansion @ ./loading.jl:2464 [inlined] [30] macro expansion @ ./lock.jl:376 [inlined] [31] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2428 [32] require @ ./loading.jl:2404 [inlined] [33] eval_import_path @ ./module.jl:36 [inlined] [34] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [35] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [36] top-level scope @ ~/.julia/packages/ImgCIFHandler/blQnZ/src/ImgCIFHandler.jl:22 [37] include(mod::Module, _path::String) @ Base ./Base.jl:309 [38] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2777 [39] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2536 [40] macro expansion @ ./loading.jl:2464 [inlined] [41] macro expansion @ ./lock.jl:376 [inlined] [42] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2428 [43] require @ ./loading.jl:2404 [inlined] [44] eval_import_path @ ./module.jl:36 [inlined] [45] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [46] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [47] top-level scope @ none:1 [48] eval(m::Module, e::Any) @ Core ./boot.jl:489 [49] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [50] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/CrystalInfoFramework/PJp1x/src/cif2_transformer.jl:18 in expression starting at /home/pkgeval/.julia/packages/CrystalInfoFramework/PJp1x/src/CrystalInfoFramework.jl:21 in expression starting at /home/pkgeval/.julia/packages/ImgCIFHandler/blQnZ/src/ImgCIFHandler.jl:17 Loading failed after 102.59s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using ImgCIFHandler'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:611 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:526 [3] run(::Cmd) @ Base ./process.jl:523 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:309 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [7] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 697.35s: there were unidentified errors