Package evaluation to load Decapodes on Julia 1.13.0-DEV.1324 (c1d413cf8a*) started at 2025-10-17T22:24:59.264 ################################################################################ # Set-up # Set-up completed after 0.1s ################################################################################ # Installation # Installing Decapodes... Resolving package versions... ┌ Warning: tarball content of url https://api.github.com/repos/AlgebraicJulia/ACSets.jl/tarball/4da3dbf91af125f9eb6b9653fec46ad2e1780398 does not match git-tree-sha1, expected 4da3dbf91af125f9eb6b9653fec46ad2e1780398, got UInt8[0x45, 0xff, 0x8f, 0x48, 0x62, 0xe2, 0x6c, 0x40, 0x9e, 0x1a, 0x3d, 0x69, 0x3c, 0xd1, 0x12, 0x92, 0x11, 0xbd, 0x55, 0xce] └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:847 Cloning [227ef7b5-1206-438b-ac65-934d6da304b8] ACSets from https://github.com/AlgebraicJulia/ACSets.jl.git Installed ACSets ─ v0.2.25 Updating `~/.julia/environments/v1.13/Project.toml` [679ab3ea] + Decapodes v0.6.4 Updating `~/.julia/environments/v1.13/Manifest.toml` [227ef7b5] + ACSets v0.2.25 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.4.0 [23cfdc9f] + AlgebraicInterfaces v0.1.4 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.21.0 [4c555306] + ArrayLayouts v1.12.0 [a9b6321e] + Atomix v1.1.2 [e2ed5e7c] + Bijections v0.2.2 ⌅ [134e5e36] + Catlab v0.16.20 [d360d2e6] + ChainRulesCore v1.26.0 [3da002f7] + ColorTypes v0.12.1 [5ae59095] + Colors v0.13.1 ⌃ [b1c52339] + CombinatorialSpaces v0.8.0 ⌅ [861a8166] + Combinatorics v1.0.2 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [0fb5dd42] + CompTime v0.1.2 [34da2185] + Compat v4.18.1 [b0b7db55] + ComponentArrays v0.15.29 [a81c6b42] + Compose v0.9.6 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [679ab3ea] + Decapodes v0.6.4 [6f00c28b] + DiagrammaticEquations v0.2.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [ffbed154] + DocStringExtensions v0.9.5 ⌃ [7c1d4256] + DynamicPolynomials v0.6.3 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [411431e0] + Extents v0.1.6 [5789e2e9] + FileIO v1.17.1 [1a297f60] + FillArrays v1.14.0 [53c48c17] + FixedPointNumbers v0.8.5 [f6369f11] + ForwardDiff v1.2.2 [d9f16b24] + Functors v0.5.2 ⌅ [f0ffcf3b] + GATlab v0.1.6 [6b9d7cbe] + GeneralizedGenerated v0.3.3 [5c1252a2] + GeometryBasics v0.5.10 [615f187c] + IfElse v0.1.1 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.3 [b14d175d] + JuliaVariables v0.2.4 [63c18a36] + KernelAbstractions v0.9.38 [ba0b0d4f] + Krylov v0.10.2 [b964fa9f] + LaTeXStrings v1.4.0 [5078a376] + LazyArrays v2.8.0 [9c8b4983] + LightXML v0.9.3 [2ab3a3ac] + LogExpFunctions v0.3.29 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.16 [442fdcdd] + Measures v0.3.2 [7269a6da] + MeshIO v0.5.3 [e1d29d7a] + Missings v1.2.0 ⌃ [102ac46a] + MultivariatePolynomials v0.5.9 [d8a4904e] + MutableArithmetics v1.6.6 [77ba4419] + NaNMath v1.1.3 [71a1bf82] + NameResolution v0.1.5 [bac558e1] + OrderedCollections v1.8.1 [12d937ae] + PEG v1.0.4 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [2ae35dd2] + Permutations v0.4.23 [d236fae5] + PreallocationTools v0.4.34 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [8162dcfd] + PrettyPrint v0.2.0 ⌅ [08abe8d2] + PrettyTables v2.4.0 [43287f4e] + PtrArrays v1.3.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [7e49a35a] + RuntimeGeneratedFunctions v0.5.15 [431bcebd] + SciMLPublic v1.0.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [aedffcd0] + Static v1.3.0 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.6 [892a3eda] + StringManipulation v0.4.1 [6ec83bb0] + StructEquality v2.1.0 [856f2bd8] + StructTypes v1.11.0 ⌃ [2efcf032] + SymbolicIndexingInterface v0.3.44 ⌅ [d1185830] + SymbolicUtils v3.32.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [ed4db957] + TaskLocalValues v0.1.3 [8ea1fca8] + TermInterface v2.0.0 [c5d3f3f7] + TetGen v2.0.0 [a759f4b9] + TimerOutputs v0.5.29 [3a884ed6] + UnPack v1.0.2 [a7c27f48] + Unityper v0.1.6 [013be700] + UnsafeAtomics v0.3.0 [5ae413db] + EarCut_jll v2.2.4+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [b47fdcd6] + TetGen_jll v1.5.3+0 [02c8fc9c] + XML2_jll v2.15.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.9.9 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.46.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.67.1+0 [3f19e933] + p7zip_jll v17.6.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 10.06s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 2850.8 ms ✓ SymbolicIndexingInterface → SymbolicIndexingInterfacePrettyTablesExt 34377.8 ms ✓ ACSets 7099.5 ms ✓ Compose 55546.7 ms ✓ SymbolicUtils 11597.2 ms ✓ MeshIO 93454.5 ms ✓ Catlab 61239.9 ms ✓ DiagrammaticEquations 59742.7 ms ✓ CombinatorialSpaces 48692.9 ms ✓ Decapodes 9 dependencies successfully precompiled in 383 seconds. 172 already precompiled. 2 dependencies had output during precompilation: ┌ Catlab │ WARNING: Constructor for type "FinCat" was extended in `FinSets` without explicit qualification or import. │ NOTE: Assumed "FinCat" refers to `FinCats.FinCat`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function FinCat end`. │ Hint: To silence the warning, qualify `FinCat` as `FinCats.FinCat` in the method signature or explicitly `import FinCats: FinCat`. │ WARNING: Constructor for type "SetOb" was extended in `FinSets` without explicit qualification or import. │ NOTE: Assumed "SetOb" refers to `Sets.SetOb`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function SetOb end`. │ Hint: To silence the warning, qualify `SetOb` as `Sets.SetOb` in the method signature or explicitly `import Sets: SetOb`. │ WARNING: Constructor for type "VarSet" was extended in `CSets` without explicit qualification or import. │ NOTE: Assumed "VarSet" refers to `FinSets.VarSet`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function VarSet end`. │ Hint: To silence the warning, qualify `VarSet` as `FinSets.VarSet` in the method signature or explicitly `import FinSets: VarSet`. │ WARNING: Constructor for type "VarFunction" was extended in `CSets` without explicit qualification or import. │ NOTE: Assumed "VarFunction" refers to `FinSets.VarFunction`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function VarFunction end`. │ Hint: To silence the warning, qualify `VarFunction` as `FinSets.VarFunction` in the method signature or explicitly `import FinSets: VarFunction`. │ WARNING: Constructor for type "ACSet" was extended in `CSets` without explicit qualification or import. │ NOTE: Assumed "ACSet" refers to `ACSets.ACSet`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function ACSet end`. │ Hint: To silence the warning, qualify `ACSet` as `ACSets.ACSet` in the method signature or explicitly `import ACSets: ACSet`. └ ┌ DiagrammaticEquations │ WARNING: Constructor for type "Decapode" was extended in `DiagrammaticEquations` without explicit qualification or import. │ NOTE: Assumed "Decapode" refers to `decapodeacset.Decapode`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Decapode end`. │ Hint: To silence the warning, qualify `Decapode` as `decapodeacset.Decapode` in the method signature or explicitly `import decapodeacset: Decapode`. │ WARNING: Constructor for type "SummationDecapode" was extended in `DiagrammaticEquations` without explicit qualification or import. │ NOTE: Assumed "SummationDecapode" refers to `decapodeacset.SummationDecapode`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function SummationDecapode end`. │ Hint: To silence the warning, qualify `SummationDecapode` as `decapodeacset.SummationDecapode` in the method signature or explicitly `import decapodeacset: SummationDecapode`. │ WARNING: Constructor for type "Term" was extended in `DiagrammaticEquations` without explicit qualification or import. │ NOTE: Assumed "Term" refers to `decapodes.Term`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Term end`. │ Hint: To silence the warning, qualify `Term` as `decapodes.Term` in the method signature or explicitly `import decapodes: Term`. │ WARNING: Constructor for type "Judgement" was extended in `DiagrammaticEquations` without explicit qualification or import. │ NOTE: Assumed "Judgement" refers to `decapodes.Judgement`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Judgement end`. │ Hint: To silence the warning, qualify `Judgement` as `decapodes.Judgement` in the method signature or explicitly `import decapodes: Judgement`. │ WARNING: Constructor for type "Equation" was extended in `DiagrammaticEquations` without explicit qualification or import. │ NOTE: Assumed "Equation" refers to `decapodes.Equation`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Equation end`. │ Hint: To silence the warning, qualify `Equation` as `decapodes.Equation` in the method signature or explicitly `import decapodes: Equation`. │ WARNING: Constructor for type "Ident" was extended in `DiagrammaticEquations` without explicit qualification or import. │ NOTE: Assumed "Ident" refers to `.Ident`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Ident end`. │ Hint: To silence the warning, qualify `Ident` as `.Ident` in the method signature or explicitly `import : Ident`. └ Precompilation completed after 384.12s ################################################################################ # Loading # Loading Decapodes... Loading completed after 30.01s PkgEval succeeded after 446.08s