Package evaluation of Devito on Julia 1.13.0-DEV.582 (c0a1728d50*) started at 2025-05-14T16:27:28.124


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# Set-up
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Set-up completed after 0.25s


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# Installation
#

Installing Devito...
   Resolving package versions...
   Installed Conda ── v1.10.2
   Installed PyCall ─ v1.96.4
   Installed Devito ─ v1.0.0
    Updating `~/.julia/environments/v1.13/Project.toml`
  [06ed14b1] + Devito v1.0.0
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [8f4d0f93] + Conda v1.10.2
  [06ed14b1] + Devito v1.0.0
  [ffbed154] + DocStringExtensions v0.9.4
  [692b3bcd] + JLLWrappers v1.7.0
  [682c06a0] + JSON v0.21.4
  [da04e1cc] + MPI v0.20.22
  [3da0fdf6] + MPIPreferences v0.1.11
  [1914dd2f] + MacroTools v0.5.16
  [69de0a69] + Parsers v2.8.3
  [eebad327] + PkgVersion v0.3.3
  [aea7be01] + PrecompileTools v1.3.2
  [21216c6a] + Preferences v1.4.3
  [438e738f] + PyCall v1.96.4
  [ae029012] + Requires v1.3.1
⌅ [5e0ebb24] + Strided v1.2.3
  [9d95972d] + TupleTools v1.6.0
  [81def892] + VersionParsing v1.3.0
  [e33a78d0] + Hwloc_jll v2.12.0+0
  [7cb0a576] + MPICH_jll v4.3.0+1
  [f1f71cc9] + MPItrampoline_jll v5.5.3+0
  [9237b28f] + MicrosoftMPI_jll v10.1.4+3
  [fe0851c0] + OpenMPI_jll v5.0.7+2
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.12.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.13.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [f489334b] + StyledStrings v1.11.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.12.1+1
  [e37daf67] + LibGit2_jll v1.9.0+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.2.25
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [458c3c95] + OpenSSL_jll v3.5.0+0
  [83775a58] + Zlib_jll v1.3.1+2
  [8e850b90] + libblastrampoline_jll v5.12.0+0
  [8e850ede] + nghttp2_jll v1.65.0+0
  [3f19e933] + p7zip_jll v17.5.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`
    Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log`
    Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log`
    Building Devito → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/7c24bba307e46f20017fed2691f3fedbdc4fe348/build.log`

Installation failed after 172.1s

ERROR: LoadError: Error building `Devito`: 
Collecting devito[extras,tests]
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Building wheels for collected packages: pyrevolve, codepy, cgen, contexttimer
  DEPRECATION: Building 'pyrevolve' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'pyrevolve'. Discussion can be found at https://github.com/pypa/pip/issues/6334
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  DEPRECATION: Building 'contexttimer' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'contexttimer'. Discussion can be found at https://github.com/pypa/pip/issues/6334
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Successfully built pyrevolve codepy cgen contexttimer
Installing collected packages: wcwidth, sortedcontainers, py-cpuinfo, pure-eval, ptyprocess, mpmath, fastjsonschema, contexttimer, zict, typing-extensions, traitlets, tornado, toolz, tblib, sympy, six, siphash24, scipy, rpds-py, pyzmq, pyyaml, pytest-runner, pyrevolve, pyparsing, pygments, pyflakes, pycodestyle, psutil, prompt_toolkit, pillow, pexpect, parso, nest-asyncio, multidict, msgpack, mccabe, MarkupSafe, locket, kiwisolver, iniconfig, fsspec, fonttools, executing, decorator, debugpy, cycler, coverage, contourpy, cloudpickle, click, attrs, asttokens, anytree, stack_data, referencing, pytools, python-dateutil, pytest, pooch, partd, matplotlib-inline, jupyter-core, jinja2, jedi, ipython-pygments-lexers, flake8, comm, codecov, pytest-cov, matplotlib, jupyter-client, jsonschema-specifications, ipython, dask, cgen, jsonschema, ipykernel, distributed, codepy, nbformat, devito, nbval

Successfully installed MarkupSafe-3.0.2 anytree-2.13.0 asttokens-3.0.0 attrs-25.3.0 cgen-2020.1 click-8.2.0 cloudpickle-3.1.1 codecov-2.1.13 codepy-2023.1 comm-0.2.2 contexttimer-0.3.3 contourpy-1.3.2 coverage-7.8.0 cycler-0.12.1 dask-2025.5.0 debugpy-1.8.14 decorator-5.2.1 devito-4.8.16 distributed-2025.5.0 executing-2.2.0 fastjsonschema-2.21.1 flake8-7.2.0 fonttools-4.58.0 fsspec-2025.3.2 iniconfig-2.1.0 ipykernel-6.29.5 ipython-9.2.0 ipython-pygments-lexers-1.1.1 jedi-0.19.2 jinja2-3.1.6 jsonschema-4.23.0 jsonschema-specifications-2025.4.1 jupyter-client-8.6.3 jupyter-core-5.7.2 kiwisolver-1.4.8 locket-1.0.0 matplotlib-3.10.3 matplotlib-inline-0.1.7 mccabe-0.7.0 mpmath-1.3.0 msgpack-1.1.0 multidict-6.2.0 nbformat-5.10.4 nbval-0.11.0 nest-asyncio-1.6.0 parso-0.8.4 partd-1.4.2 pexpect-4.9.0 pillow-11.2.1 pooch-1.8.2 prompt_toolkit-3.0.51 psutil-7.0.0 ptyprocess-0.7.0 pure-eval-0.2.3 py-cpuinfo-9.0.0 pycodestyle-2.13.0 pyflakes-3.3.2 pygments-2.19.1 pyparsing-3.2.3 pyrevolve-2.2.4 pytest-8.3.5 pytest-cov-6.1.1 pytest-runner-6.0.1 python-dateutil-2.9.0.post0 pytools-2025.1.4 pyyaml-6.0.2 pyzmq-26.4.0 referencing-0.36.2 rpds-py-0.24.0 scipy-1.15.3 siphash24-1.7 six-1.17.0 sortedcontainers-2.4.0 stack_data-0.6.3 sympy-1.13.3 tblib-3.1.0 toolz-1.0.0 tornado-6.4.2 traitlets-5.14.3 typing-extensions-4.13.2 wcwidth-0.2.13 zict-3.0.0
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Requirement already satisfied: nest-asyncio in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipykernel>=6.9.1->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (1.6.0)
Requirement already satisfied: packaging in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipykernel>=6.9.1->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (25.0)
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Requirement already satisfied: jedi>=0.16 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipython>=5->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (0.19.2)
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Requirement already satisfied: executing>=1.2.0 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from stack_data->ipython>=5->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (2.2.0)
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Requirement already satisfied: pure-eval in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from stack_data->ipython>=5->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (0.2.3)
Downloading ipyparallel-9.0.1-py3-none-any.whl (306 kB)
Building wheels for collected packages: mpi4py
  Building wheel for mpi4py (pyproject.toml): started
  Building wheel for mpi4py (pyproject.toml): finished with status 'error'
  error: subprocess-exited-with-error
  
  × Building wheel for mpi4py (pyproject.toml) did not run successfully.
  │ exit code: 1
  ╰─> [88 lines of output]
      /tmp/pip-build-env-wo0xvbur/overlay/lib/python3.12/site-packages/setuptools/dist.py:761: SetuptoolsDeprecationWarning: License classifiers are deprecated.
      !!
      
              ********************************************************************************
              Please consider removing the following classifiers in favor of a SPDX license expression:
      
              License :: OSI Approved :: BSD License
      
              See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
              ********************************************************************************
      
      !!
        self._finalize_license_expression()
      running bdist_wheel
      running build
      running build_src
      using Cython 3.1.0
      cythonizing 'src/mpi4py/MPI.pyx' -> 'src/mpi4py/MPI.c'
      running build_py
      creating build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/__init__.py -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/__main__.py -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/bench.py -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/run.py -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/typing.py -> build/lib.linux-x86_64-cpython-312/mpi4py
      creating build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/__init__.py -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/__main__.py -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/_base.py -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/_core.py -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/aplus.py -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/pool.py -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/server.py -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/util.py -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      creating build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/util/__init__.py -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/util/dtlib.py -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/util/pkl5.py -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/util/pool.py -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/util/sync.py -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/MPI.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/__init__.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/__main__.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/bench.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/run.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/typing.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/py.typed -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/MPI.pxd -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/__init__.pxd -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/libmpi.pxd -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/MPI.h -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/MPI_api.h -> build/lib.linux-x86_64-cpython-312/mpi4py
      creating build/lib.linux-x86_64-cpython-312/mpi4py/include/mpi4py
      copying src/mpi4py/include/mpi4py/mpi4py.h -> build/lib.linux-x86_64-cpython-312/mpi4py/include/mpi4py
      copying src/mpi4py/include/mpi4py/pycapi.h -> build/lib.linux-x86_64-cpython-312/mpi4py/include/mpi4py
      copying src/mpi4py/include/mpi4py/mpi4py.i -> build/lib.linux-x86_64-cpython-312/mpi4py/include/mpi4py
      copying src/mpi4py/include/mpi4py/mpi.pxi -> build/lib.linux-x86_64-cpython-312/mpi4py/include/mpi4py
      copying src/mpi4py/futures/__init__.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/__main__.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/_base.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/_core.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/aplus.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/pool.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/server.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/util.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/util/__init__.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/util/dtlib.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/util/pkl5.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/util/pool.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/util/sync.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      running build_ext
      MPI configuration: [mpi] from 'mpi.cfg'
      checking for MPI compile and link ...
      nvc -noswitcherror -tp=px -fPIC -I/home/pkgeval/.julia/conda/3/x86_64/include/python3.12 -c _configtest.c -o _configtest.o
      failure.
      removing: _configtest.c _configtest.o
      error: Cannot compile MPI programs. Check your configuration!!!
      Installing mpi4py requires a working MPI implementation.
      If you are running on a supercomputer or cluster, check with
      the system administrator or refer to the system user guide.
      Otherwise, if you are running on a laptop or desktop computer,
      your may be missing the MPICH or Open MPI development package:
      * On Fedora/RHEL systems, run:
        $ sudo dnf install mpich-devel     # for MPICH
        $ sudo dnf install openmpi-devel   # for Open MPI
      * On Debian/Ubuntu systems, run:
        $ sudo apt install libmpich-dev    # for MPICH
        $ sudo apt install libopenmpi-dev  # for Open MPI
      [end of output]
  
  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building wheel for mpi4py
Failed to build mpi4py
ERROR: Failed to build installable wheels for some pyproject.toml based projects (mpi4py)
Collecting mpi4py<4.0.4 (from -r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 1))
  Downloading mpi4py-4.0.3.tar.gz (466 kB)
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Installing backend dependencies: started
  Installing backend dependencies: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Collecting ipyparallel<9.1 (from -r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2))
  Downloading ipyparallel-9.0.1-py3-none-any.whl.metadata (6.3 kB)
Requirement already satisfied: decorator in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (5.2.1)
Requirement already satisfied: ipykernel>=6.9.1 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (6.29.5)
Requirement already satisfied: ipython>=5 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (9.2.0)
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Requirement already satisfied: psutil in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (7.0.0)
Requirement already satisfied: python-dateutil>=2.1 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (2.9.0.post0)
Requirement already satisfied: pyzmq>=25 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (26.4.0)
Requirement already satisfied: tornado>=6.1 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (6.4.2)
Requirement already satisfied: tqdm in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (4.67.1)
Requirement already satisfied: traitlets>=5 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (5.14.3)
Requirement already satisfied: comm>=0.1.1 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipykernel>=6.9.1->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (0.2.2)
Requirement already satisfied: debugpy>=1.6.5 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipykernel>=6.9.1->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (1.8.14)
Requirement already satisfied: jupyter-core!=5.0.*,>=4.12 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipykernel>=6.9.1->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (5.7.2)
Requirement already satisfied: matplotlib-inline>=0.1 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipykernel>=6.9.1->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (0.1.7)
Requirement already satisfied: nest-asyncio in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipykernel>=6.9.1->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (1.6.0)
Requirement already satisfied: packaging in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipykernel>=6.9.1->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (25.0)
Requirement already satisfied: ipython-pygments-lexers in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipython>=5->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (1.1.1)
Requirement already satisfied: jedi>=0.16 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipython>=5->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (0.19.2)
Requirement already satisfied: pexpect>4.3 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipython>=5->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (4.9.0)
Requirement already satisfied: prompt_toolkit<3.1.0,>=3.0.41 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipython>=5->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (3.0.51)
Requirement already satisfied: pygments>=2.4.0 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipython>=5->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (2.19.1)
Requirement already satisfied: stack_data in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from ipython>=5->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (0.6.3)
Requirement already satisfied: wcwidth in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from prompt_toolkit<3.1.0,>=3.0.41->ipython>=5->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (0.2.13)
Requirement already satisfied: parso<0.9.0,>=0.8.4 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from jedi>=0.16->ipython>=5->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (0.8.4)
Requirement already satisfied: platformdirs>=2.5 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from jupyter-core!=5.0.*,>=4.12->ipykernel>=6.9.1->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (4.3.8)
Requirement already satisfied: ptyprocess>=0.5 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from pexpect>4.3->ipython>=5->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (0.7.0)
Requirement already satisfied: six>=1.5 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from python-dateutil>=2.1->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (1.17.0)
Requirement already satisfied: executing>=1.2.0 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from stack_data->ipython>=5->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (2.2.0)
Requirement already satisfied: asttokens>=2.1.0 in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from stack_data->ipython>=5->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (3.0.0)
Requirement already satisfied: pure-eval in /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages (from stack_data->ipython>=5->ipyparallel<9.1->-r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt (line 2)) (0.2.3)
Downloading ipyparallel-9.0.1-py3-none-any.whl (306 kB)
Building wheels for collected packages: mpi4py
  Building wheel for mpi4py (pyproject.toml): started
  Building wheel for mpi4py (pyproject.toml): finished with status 'error'
  error: subprocess-exited-with-error
  
  × Building wheel for mpi4py (pyproject.toml) did not run successfully.
  │ exit code: 1
  ╰─> [92 lines of output]
      /tmp/pip-build-env-kl0wpag9/overlay/lib/python3.12/site-packages/setuptools/dist.py:761: SetuptoolsDeprecationWarning: License classifiers are deprecated.
      !!
      
              ********************************************************************************
              Please consider removing the following classifiers in favor of a SPDX license expression:
      
              License :: OSI Approved :: BSD License
      
              See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
              ********************************************************************************
      
      !!
        self._finalize_license_expression()
      running bdist_wheel
      running build
      running build_src
      using Cython 3.1.0
      cythonizing 'src/mpi4py/MPI.pyx' -> 'src/mpi4py/MPI.c'
      running build_py
      creating build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/__init__.py -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/__main__.py -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/bench.py -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/run.py -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/typing.py -> build/lib.linux-x86_64-cpython-312/mpi4py
      creating build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/__init__.py -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/__main__.py -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/_base.py -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/_core.py -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/aplus.py -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/pool.py -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/server.py -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/util.py -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      creating build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/util/__init__.py -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/util/dtlib.py -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/util/pkl5.py -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/util/pool.py -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/util/sync.py -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/MPI.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/__init__.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/__main__.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/bench.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/run.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/typing.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/py.typed -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/MPI.pxd -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/__init__.pxd -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/libmpi.pxd -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/MPI.h -> build/lib.linux-x86_64-cpython-312/mpi4py
      copying src/mpi4py/MPI_api.h -> build/lib.linux-x86_64-cpython-312/mpi4py
      creating build/lib.linux-x86_64-cpython-312/mpi4py/include/mpi4py
      copying src/mpi4py/include/mpi4py/mpi4py.h -> build/lib.linux-x86_64-cpython-312/mpi4py/include/mpi4py
      copying src/mpi4py/include/mpi4py/pycapi.h -> build/lib.linux-x86_64-cpython-312/mpi4py/include/mpi4py
      copying src/mpi4py/include/mpi4py/mpi4py.i -> build/lib.linux-x86_64-cpython-312/mpi4py/include/mpi4py
      copying src/mpi4py/include/mpi4py/mpi.pxi -> build/lib.linux-x86_64-cpython-312/mpi4py/include/mpi4py
      copying src/mpi4py/futures/__init__.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/__main__.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/_base.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/_core.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/aplus.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/pool.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/server.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/futures/util.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/futures
      copying src/mpi4py/util/__init__.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/util/dtlib.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/util/pkl5.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/util/pool.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      copying src/mpi4py/util/sync.pyi -> build/lib.linux-x86_64-cpython-312/mpi4py/util
      running build_ext
      MPI configuration: [mpi] from 'mpi.cfg'
      checking for MPI compile and link ...
      gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /home/pkgeval/.julia/conda/3/x86_64/include -fPIC -O2 -isystem /home/pkgeval/.julia/conda/3/x86_64/include -fPIC -I/home/pkgeval/.julia/conda/3/x86_64/include/python3.12 -c _configtest.c -o _configtest.o
      _configtest.c:2:10: fatal error: mpi.h: No such file or directory
          2 | #include <mpi.h>
            |          ^~~~~~~
      compilation terminated.
      failure.
      removing: _configtest.c _configtest.o
      error: Cannot compile MPI programs. Check your configuration!!!
      Installing mpi4py requires a working MPI implementation.
      If you are running on a supercomputer or cluster, check with
      the system administrator or refer to the system user guide.
      Otherwise, if you are running on a laptop or desktop computer,
      your may be missing the MPICH or Open MPI development package:
      * On Fedora/RHEL systems, run:
        $ sudo dnf install mpich-devel     # for MPICH
        $ sudo dnf install openmpi-devel   # for Open MPI
      * On Debian/Ubuntu systems, run:
        $ sudo apt install libmpich-dev    # for MPICH
        $ sudo apt install libopenmpi-dev  # for Open MPI
      [end of output]
  
  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building wheel for mpi4py
Failed to build mpi4py
ERROR: Failed to build installable wheels for some pyproject.toml based projects (mpi4py)
[ Info: Devito not installed or broken
[ Info: DevitoPRO not installed or broken
[ Info: Building devito from latest release
ERROR: LoadError: failed process: Process(`/home/pkgeval/.julia/conda/3/x86_64/bin/python -m pip install --no-cache-dir -r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt`, ProcessExited(1)) [1]

Stacktrace:
 [1] top-level scope
   @ ~/.julia/packages/Devito/hpHZ6/deps/build.jl:101
 [2] include(mapexpr::Function, mod::Module, _path::String)
   @ Base ./Base.jl:310
 [3] top-level scope
   @ none:5
 [4] eval(m::Module, e::Any)
   @ Core ./boot.jl:489
 [5] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:297
 [6] _start()
   @ Base ./client.jl:564
in expression starting at /home/pkgeval/.julia/packages/Devito/hpHZ6/deps/build.jl:58

caused by: failed process: Process(`/home/pkgeval/.julia/conda/3/x86_64/bin/python -m pip install --no-cache-dir -r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt`, ProcessExited(1)) [1]

Stacktrace:
  [1] pipeline_error
    @ ./process.jl:602 [inlined]
  [2] run(::Cmd; wait::Bool)
    @ Base ./process.jl:517
  [3] run
    @ ./process.jl:514 [inlined]
  [4] pip(pkg::String)
    @ Main ~/.julia/packages/Devito/hpHZ6/deps/build.jl:36
  [5] mpi4py(mpireqs::String)
    @ Main ~/.julia/packages/Devito/hpHZ6/deps/build.jl:51
  [6] top-level scope
    @ ~/.julia/packages/Devito/hpHZ6/deps/build.jl:91
  [7] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:310
  [8] top-level scope
    @ none:5
  [9] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [10] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:297
 [11] _start()
    @ Base ./client.jl:564

caused by: failed process: Process(`/home/pkgeval/.julia/conda/3/x86_64/bin/python -m pip install --no-cache-dir -r https://raw.githubusercontent.com/devitocodes/devito/main/requirements-mpi.txt`, ProcessExited(1)) [1]

Stacktrace:
  [1] pipeline_error
    @ ./process.jl:602 [inlined]
  [2] run(::Cmd; wait::Bool)
    @ Base ./process.jl:517
  [3] run
    @ ./process.jl:514 [inlined]
  [4] pip(pkg::String)
    @ Main ~/.julia/packages/Devito/hpHZ6/deps/build.jl:36
  [5] mpi4py(mpireqs::String)
    @ Main ~/.julia/packages/Devito/hpHZ6/deps/build.jl:44
  [6] top-level scope
    @ ~/.julia/packages/Devito/hpHZ6/deps/build.jl:91
  [7] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:310
  [8] top-level scope
    @ none:5
  [9] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [10] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:297
 [11] _start()
    @ Base ./client.jl:564
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68
  [2] (::Pkg.Operations.var"#137#138"{Bool, Pkg.Types.Context, String, PackageSpec, String})()
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1457
  [3] withenv(::Pkg.Operations.var"#137#138"{Bool, Pkg.Types.Context, String, PackageSpec, String}, ::Pair{String, String}, ::Vararg{Pair{String}})
    @ Base ./env.jl:265
  [4] (::Pkg.Operations.var"#197#198"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#137#138"{Bool, Pkg.Types.Context, String, PackageSpec, String}, Pkg.Types.Context, PackageSpec})()
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2197
  [5] with_temp_env(fn::Pkg.Operations.var"#197#198"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#137#138"{Bool, Pkg.Types.Context, String, PackageSpec, String}, Pkg.Types.Context, PackageSpec}, temp_env::String)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2055
  [6] (::Pkg.Operations.var"#193#194"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#137#138"{Bool, Pkg.Types.Context, String, PackageSpec, String}, Pkg.Types.Context, PackageSpec, String, String})(tmp::String)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2164
  [7] mktempdir(fn::Pkg.Operations.var"#193#194"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#137#138"{Bool, Pkg.Types.Context, String, PackageSpec, String}, Pkg.Types.Context, PackageSpec, String, String}, parent::String; prefix::String)
    @ Base.Filesystem ./file.jl:899
  [8] mktempdir(fn::Function, parent::String)
    @ Base.Filesystem ./file.jl:895
  [9] #sandbox#189
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2111 [inlined]
 [10] build_versions(ctx::Pkg.Types.Context, uuids::Set{UUID}; verbose::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1438
 [11] build_versions
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1356 [inlined]
 [12] add(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}, new_git::Set{UUID}; allow_autoprecomp::Bool, preserve::PreserveLevel, platform::Base.BinaryPlatforms.Platform, target::Symbol)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1733
 [13] add
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1680 [inlined]
 [14] add(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; preserve::PreserveLevel, platform::Base.BinaryPlatforms.Platform, target::Symbol, allow_autoprecomp::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:328
 [15] add(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:164
 [16] add(pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:153
 [17] add(pkg::PackageSpec)
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:151
 [18] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:112
 [19] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [20] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:331
 [21] _start()
    @ Base ./client.jl:564
in expression starting at /PkgEval.jl/scripts/evaluate.jl:109

PkgEval skipped after 213.72s: package could not be installed