Package evaluation of AtomicSymmetries on Julia 1.13.0-DEV.582 (c0a1728d50*) started at 2025-05-14T11:06:04.233 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.06s ################################################################################ # Installation # Installing AtomicSymmetries... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [7e24f7a5] + AtomicSymmetries v0.7.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [7e24f7a5] + AtomicSymmetries v0.7.0 [8ce10254] + Bumper v0.7.1 [34da2185] + Compat v4.16.0 ⌅ [80545937] + CrystallographyCore v0.3.3 [692b3bcd] + JLLWrappers v1.7.0 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [f761d5c5] + Spglib v0.9.5 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [6ec83bb0] + StructEquality v2.1.0 [c4a57d5a] + UnsafeArrays v1.0.8 ⌅ [ac4a9f1e] + spglib_jll v2.1.0+0 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.12.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.12.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.35s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 74.82s ################################################################################ # Testing # Testing AtomicSymmetries Status `/tmp/jl_EUMZpW/Project.toml` [7e24f7a5] AtomicSymmetries v0.7.0 [8ce10254] Bumper v0.7.1 [8bb1440f] DelimitedFiles v1.9.1 [438e738f] PyCall v1.96.4 [f761d5c5] Spglib v0.9.5 [37e2e46d] LinearAlgebra v1.12.0 [2f01184e] SparseArrays v1.12.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_EUMZpW/Manifest.toml` [7e24f7a5] AtomicSymmetries v0.7.0 [8ce10254] Bumper v0.7.1 [34da2185] Compat v4.16.0 [8f4d0f93] Conda v1.10.2 ⌅ [80545937] CrystallographyCore v0.3.3 [8bb1440f] DelimitedFiles v1.9.1 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [1914dd2f] MacroTools v0.5.16 [69de0a69] Parsers v2.8.3 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [438e738f] PyCall v1.96.4 [f761d5c5] Spglib v0.9.5 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [6ec83bb0] StructEquality v2.1.0 [c4a57d5a] UnsafeArrays v1.0.8 [81def892] VersionParsing v1.3.0 ⌅ [ac4a9f1e] spglib_jll v2.1.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.12.1+1 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.2.25 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.65.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... vector_input = [0.6274438121634499, 0.20830354408453045, 0.9038465919112001, 0.49202445869540934, 0.22645104402809635, 0.8040278660380481] vector_input = [0.0, 0.0, 0.0, 0.0, 0.0, 0.0] BCC: Error During Test at /home/pkgeval/.julia/packages/AtomicSymmetries/ShPeo/test/runtests.jl:9 Got exception outside of a @test BoundsError: attempt to access 3×3 LinearIndices{2, Tuple{Base.OneTo{Int64}, Base.OneTo{Int64}}} at index [4, 3] Stacktrace: [1] throw_boundserror(A::LinearIndices{2, Tuple{Base.OneTo{Int64}, Base.OneTo{Int64}}}, I::Tuple{Int64, Int64}) @ Base ./essentials.jl:15 [2] checkbounds @ ./abstractarray.jl:697 [inlined] [3] _getindex @ ./abstractarray.jl:1375 [inlined] [4] getindex @ ./abstractarray.jl:1347 [inlined] [5] _unsafe_view_impl @ ~/.julia/packages/UnsafeArrays/WkpzL/src/unsafe_array.jl:104 [inlined] [6] unsafe_view @ ~/.julia/packages/UnsafeArrays/WkpzL/src/unsafe_array.jl:72 [inlined] [7] view @ ./subarray.jl:216 [inlined] [8] _isbanded_impl(A::UnsafeArrays.UnsafeArray{Float64, 2}, kl::Int64, ku::Int64) @ LinearAlgebra /opt/julia/share/julia/stdlib/v1.13/LinearAlgebra/src/generic.jl:1530 [9] _isbanded @ /opt/julia/share/julia/stdlib/v1.13/LinearAlgebra/src/generic.jl:1489 [inlined] [10] isbanded @ /opt/julia/share/julia/stdlib/v1.13/LinearAlgebra/src/generic.jl:1483 [inlined] [11] isdiag @ /opt/julia/share/julia/stdlib/v1.13/LinearAlgebra/src/generic.jl:1586 [inlined] [12] inv(A::UnsafeArrays.UnsafeArray{Float64, 2}) @ LinearAlgebra /opt/julia/share/julia/stdlib/v1.13/LinearAlgebra/src/dense.jl:1083 [13] macro expansion @ ~/.julia/packages/AtomicSymmetries/ShPeo/src/crystal.jl:16 [inlined] [14] macro expansion @ ~/.julia/packages/Bumper/erETf/src/internals.jl:76 [inlined] [15] get_crystal_coords!(crystal::UnsafeArrays.UnsafeArray{Float64, 2}, cartesian::Matrix{Float64}, cell::Matrix{Float64}; buffer::Bumper.SlabBufferImpl.SlabBuffer{1048576}) @ AtomicSymmetries ~/.julia/packages/AtomicSymmetries/ShPeo/src/crystal.jl:10 [16] get_crystal_coords! @ ~/.julia/packages/AtomicSymmetries/ShPeo/src/crystal.jl:8 [inlined] [17] macro expansion @ ~/.julia/packages/AtomicSymmetries/ShPeo/src/symmetries_core.jl:215 [inlined] [18] macro expansion @ ~/.julia/packages/Bumper/erETf/src/internals.jl:76 [inlined] [19] symmetrize_positions!(positions::Matrix{Float64}, cell::Matrix{Float64}, symmetry_group::Symmetries{Float64}; buffer::Bumper.SlabBufferImpl.SlabBuffer{1048576}) @ AtomicSymmetries ~/.julia/packages/AtomicSymmetries/ShPeo/src/symmetries_core.jl:213 [20] symmetrize_positions! @ ~/.julia/packages/AtomicSymmetries/ShPeo/src/symmetries_core.jl:206 [inlined] [21] test_bcc(; verbose::Bool) @ Main ~/.julia/packages/AtomicSymmetries/ShPeo/test/test_bcc.jl:37 [22] test_bcc() @ Main ~/.julia/packages/AtomicSymmetries/ShPeo/test/test_bcc.jl:4 [23] top-level scope @ ~/.julia/packages/AtomicSymmetries/ShPeo/test/runtests.jl:1828 [24] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1833 [inlined] [25] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [26] top-level scope @ none:6 [27] eval(m::Module, e::Any) @ Core ./boot.jl:489 [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:297 [29] _start() @ Base ./client.jl:564 Test Summary: | Pass Error Total Time BCC | 1 1 2 39.7s RNG of the outermost testset: Random.Xoshiro(0x385ba60464c4001e, 0x390d6348987f301c, 0x29fbc3ad66e5a277, 0xe03acecc2440b1bc, 0xd70a49d62e8298e9) ERROR: LoadError: Some tests did not pass: 1 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/AtomicSymmetries/ShPeo/test/runtests.jl:9 Testing failed after 65.32s ERROR: LoadError: Package AtomicSymmetries errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2418 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2273 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:498 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:164 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [7] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:151 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:309 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:331 [12] _start() @ Base ./client.jl:564 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 187.26s: package tests unexpectedly errored